RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ZNF506Q5JVG8 444 aa15.39■□□□□ 0.05
SMARCD1-209ENST00000550477 TMEM167BQ9NRX6 74 aa15.39■□□□□ 0.05
SMARCD1-209ENST00000550477 COX11Q9Y6N1 276 aa15.39■□□□□ 0.05
SMARCD1-209ENST00000550477 PGPEP1LA6NFU8 196 aa15.38■□□□□ 0.05
SMARCD1-209ENST00000550477 A8MWV9 139 aa15.38■□□□□ 0.05
SMARCD1-209ENST00000550477 FLI1Q01543 452 aaPredicted RBP15.38■□□□□ 0.05
SMARCD1-209ENST00000550477 DPPA3Q6W0C5 159 aa15.38■□□□□ 0.05
SMARCD1-209ENST00000550477 PRNTQ86SH4 94 aa15.38■□□□□ 0.05
SMARCD1-209ENST00000550477 HERC1Q15751 4861 aa15.37■□□□□ 0.05
SMARCD1-209ENST00000550477 ZNF80P51504 273 aaPredicted RBP15.37■□□□□ 0.05
SMARCD1-209ENST00000550477 FGF8P55075 233 aaPredicted RBP15.37■□□□□ 0.05
SMARCD1-209ENST00000550477 SUMO1P63165 101 aaKnown RBP15.37■□□□□ 0.05
SMARCD1-209ENST00000550477 ZFP2Q6ZN57 461 aa15.37■□□□□ 0.05
SMARCD1-209ENST00000550477 RAB24Q969Q5 203 aa15.37■□□□□ 0.05
SMARCD1-209ENST00000550477 EPDR1Q9UM22 224 aa15.37■□□□□ 0.05
SMARCD1-209ENST00000550477 A0A087WWC5 75 aa15.36■□□□□ 0.05
SMARCD1-209ENST00000550477 GGTLC3B5MD39 225 aa15.36■□□□□ 0.05
SMARCD1-209ENST00000550477 SEC11BP0C7V7 166 aa15.36■□□□□ 0.05
SMARCD1-209ENST00000550477 GCHFRP30047 84 aa15.36■□□□□ 0.05
SMARCD1-209ENST00000550477 IFITM3Q01628 133 aa15.36■□□□□ 0.05
SMARCD1-209ENST00000550477 PIK3CD-AS1Q5SR53 167 aa15.36■□□□□ 0.05
SMARCD1-209ENST00000550477 CYB561D1Q8N8Q1 229 aa15.36■□□□□ 0.05
SMARCD1-209ENST00000550477 TMEM75Q8N9X5 138 aa15.36■□□□□ 0.05
SMARCD1-209ENST00000550477 OR2G3Q8NGZ4 309 aa15.36■□□□□ 0.05
SMARCD1-209ENST00000550477 CXorf1O96002 111 aa15.35■□□□□ 0.05
SMARCD1-209ENST00000550477 SERF2P84101 59 aa15.35■□□□□ 0.05
SMARCD1-209ENST00000550477 LGALSLQ3ZCW2 172 aaPredicted RBP15.35■□□□□ 0.05
SMARCD1-209ENST00000550477 HSD17B11Q8NBQ5 300 aa15.35■□□□□ 0.05
SMARCD1-209ENST00000550477 RMI2Q96E14 147 aa15.35■□□□□ 0.05
SMARCD1-209ENST00000550477 PSMG3Q9BT73 122 aaPredicted RBP15.35■□□□□ 0.05
SMARCD1-209ENST00000550477 C11orf21Q9P2W6 132 aa15.35■□□□□ 0.05
SMARCD1-209ENST00000550477 URGCP-MRPS24S4R325 110 aa15.35■□□□□ 0.05
SMARCD1-209ENST00000550477 SUN5Q8TC36 379 aa15.34■□□□□ 0.05
SMARCD1-209ENST00000550477 ACTR3CQ9C0K3 210 aaPredicted RBP15.34■□□□□ 0.05
SMARCD1-209ENST00000550477 GAGE12JA6NER3 117 aa15.33■□□□□ 0.04
SMARCD1-209ENST00000550477 FABP5P3A8MUU1 101 aa15.33■□□□□ 0.04
SMARCD1-209ENST00000550477 RNASE3P12724 160 aaKnown RBP15.33■□□□□ 0.04
SMARCD1-209ENST00000550477 GAGE1Q13065 139 aa15.33■□□□□ 0.04
SMARCD1-209ENST00000550477 GAGE4Q13068 117 aa15.33■□□□□ 0.04
SMARCD1-209ENST00000550477 GAGE5Q13069 117 aa15.33■□□□□ 0.04
SMARCD1-209ENST00000550477 GAGE13Q4V321 117 aa15.33■□□□□ 0.04
SMARCD1-209ENST00000550477 PARLQ9H300 379 aa15.33■□□□□ 0.04
SMARCD1-209ENST00000550477 FAM30AQ9NZY2 134 aa15.33■□□□□ 0.04
SMARCD1-209ENST00000550477 ASIPP42127 132 aa15.32■□□□□ 0.04
SMARCD1-209ENST00000550477 IGLV2-11P01706 119 aa15.31■□□□□ 0.04
SMARCD1-209ENST00000550477 OR2T35Q8NGX2 323 aa15.31■□□□□ 0.04
SMARCD1-209ENST00000550477 A0A1W2PRE2 83 aa15.3■□□□□ 0.04
SMARCD1-209ENST00000550477 ATP6V0CP27449 155 aa15.3■□□□□ 0.04
SMARCD1-209ENST00000550477 SYT8Q8NBV8 401 aa15.3■□□□□ 0.04
SMARCD1-209ENST00000550477 TNFSF18Q9UNG2 199 aa15.3■□□□□ 0.04
SMARCD1-209ENST00000550477 SRRM2Q9UQ35 2752 aaKnown RBP15.29■□□□□ 0.04
SMARCD1-209ENST00000550477 RHODO00212 210 aa15.29■□□□□ 0.04
SMARCD1-209ENST00000550477 IFNA7P01567 189 aa15.29■□□□□ 0.04
SMARCD1-209ENST00000550477 KCNIP4Q6PIL6 250 aa15.29■□□□□ 0.04
SMARCD1-209ENST00000550477 Q8N976 141 aa15.29■□□□□ 0.04
SMARCD1-209ENST00000550477 DEFB104AQ8WTQ1 72 aa15.29■□□□□ 0.04
SMARCD1-209ENST00000550477 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.28■□□□□ 0.04
SMARCD1-209ENST00000550477 DAZ4Q86SG3 579 aaKnown RBP15.28■□□□□ 0.04
SMARCD1-209ENST00000550477 DAZ3Q9NR90 486 aaKnown RBP15.28■□□□□ 0.04
SMARCD1-209ENST00000550477 IL36BQ9NZH7 164 aa15.28■□□□□ 0.04
SMARCD1-209ENST00000550477 VPS13BQ7Z7G8 4022 aa15.27■□□□□ 0.04
SMARCD1-209ENST00000550477 LECT2O14960 151 aa15.27■□□□□ 0.04
SMARCD1-209ENST00000550477 Q6ZSA8 131 aa15.27■□□□□ 0.04
SMARCD1-209ENST00000550477 LINC00528Q8N1L1 170 aa15.27■□□□□ 0.04
SMARCD1-209ENST00000550477 NKX6-2Q9C056 277 aaPredicted RBP15.27■□□□□ 0.04
SMARCD1-209ENST00000550477 IGKV3D-20A0A0C4DH25 116 aa15.26■□□□□ 0.03
SMARCD1-209ENST00000550477 RBFOX3A6NFN3 312 aa15.26■□□□□ 0.03
SMARCD1-209ENST00000550477 B4DEV8 164 aa15.26■□□□□ 0.03
SMARCD1-209ENST00000550477 ELOBQ15370 118 aa15.26■□□□□ 0.03
SMARCD1-209ENST00000550477 LINC00479Q96M42 142 aa15.26■□□□□ 0.03
SMARCD1-209ENST00000550477 AQP10Q96PS8 301 aa15.26■□□□□ 0.03
SMARCD1-209ENST00000550477 ARL2-SNX15V9GYD0 113 aa15.26■□□□□ 0.03
SMARCD1-209ENST00000550477 LINC00694P0DN24 101 aa15.25■□□□□ 0.03
SMARCD1-209ENST00000550477 WFDC2Q14508 124 aa15.25■□□□□ 0.03
SMARCD1-209ENST00000550477 BAALCQ8WXS3 180 aa15.25■□□□□ 0.03
SMARCD1-209ENST00000550477 TRAV34A0A0B4J273 112 aa15.24■□□□□ 0.03
SMARCD1-209ENST00000550477 INO80EQ8NBZ0 244 aaPredicted RBP15.24■□□□□ 0.03
SMARCD1-209ENST00000550477 OR11H4Q8NGC9 324 aa15.24■□□□□ 0.03
SMARCD1-209ENST00000550477 IGKV2D-24A0A075B6R9 120 aa15.23■□□□□ 0.03
SMARCD1-209ENST00000550477 A0A087WX48 190 aa15.23■□□□□ 0.03
SMARCD1-209ENST00000550477 BORCS7-ASMTA0A0B4J1R7 106 aa15.23■□□□□ 0.03
SMARCD1-209ENST00000550477 Q8N3U1 123 aa15.23■□□□□ 0.03
SMARCD1-209ENST00000550477 HIST1H2BAQ96A08 127 aa15.23■□□□□ 0.03
SMARCD1-209ENST00000550477 CHCHD7Q9BUK0 85 aa15.23■□□□□ 0.03
SMARCD1-209ENST00000550477 SAMD10Q9BYL1 202 aa15.23■□□□□ 0.03
SMARCD1-209ENST00000550477 KRTAP29-1A8MX34 341 aaPredicted RBP15.22■□□□□ 0.03
SMARCD1-209ENST00000550477 H3BVH4 76 aa15.22■□□□□ 0.03
SMARCD1-209ENST00000550477 FAM74A4Q5TZK3 123 aa15.22■□□□□ 0.03
SMARCD1-209ENST00000550477 DMRTA1Q5VZB9 504 aa15.22■□□□□ 0.03
SMARCD1-209ENST00000550477 C14orf178Q8N769 122 aaPredicted RBP15.22■□□□□ 0.03
SMARCD1-209ENST00000550477 ZFP30Q9Y2G7 519 aa15.22■□□□□ 0.03
SMARCD1-209ENST00000550477 PHLDA3Q9Y5J5 127 aa15.22■□□□□ 0.03
SMARCD1-209ENST00000550477 ALG5Q9Y673 324 aa15.22■□□□□ 0.03
SMARCD1-209ENST00000550477 MYCBP2O75592 4640 aa15.21■□□□□ 0.03
SMARCD1-209ENST00000550477 PEX7O00628 323 aa15.21■□□□□ 0.03
SMARCD1-209ENST00000550477 DNLZQ5SXM8 178 aa15.21■□□□□ 0.03
SMARCD1-209ENST00000550477 UFSP1Q6NVU6 142 aa15.21■□□□□ 0.03
SMARCD1-209ENST00000550477 NIT1Q86X76 327 aa15.21■□□□□ 0.03
SMARCD1-209ENST00000550477 MED28Q9H204 178 aa15.21■□□□□ 0.03
SMARCD1-209ENST00000550477 JPT2Q9H910 190 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms