RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 BIN3Q9NQY0 253 aa12.38□□□□□ -0.43
RAPGEF3-220ENST00000549347 NACAE9PAV3 2078 aa12.38□□□□□ -0.43
RAPGEF3-220ENST00000549347 TRAV26-1A0A087WT03 109 aa12.37□□□□□ -0.43
RAPGEF3-220ENST00000549347 TMSB15BA0A087X1C1 80 aa12.37□□□□□ -0.43
RAPGEF3-220ENST00000549347 GRIFINA4D1Z8 144 aa12.37□□□□□ -0.43
RAPGEF3-220ENST00000549347 C19orf71A6NCJ1 209 aa12.37□□□□□ -0.43
RAPGEF3-220ENST00000549347 LY6G6CO95867 125 aa12.37□□□□□ -0.43
RAPGEF3-220ENST00000549347 IGHV3-53P01767 116 aa12.37□□□□□ -0.43
RAPGEF3-220ENST00000549347 MED14OSP0DP75 135 aa12.37□□□□□ -0.43
RAPGEF3-220ENST00000549347 RPL19P84098 196 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-220ENST00000549347 SCRT2Q9NQ03 307 aa12.37□□□□□ -0.43
RAPGEF3-220ENST00000549347 SRP19P09132 144 aaKnown RBP12.36□□□□□ -0.43
RAPGEF3-220ENST00000549347 ARMS2P0C7Q2 107 aa12.36□□□□□ -0.43
RAPGEF3-220ENST00000549347 FHL2Q14192 279 aa12.36□□□□□ -0.43
RAPGEF3-220ENST00000549347 ZNF479Q96JC4 524 aa12.36□□□□□ -0.43
RAPGEF3-220ENST00000549347 SFTA3P0C7M3 94 aa12.35□□□□□ -0.43
RAPGEF3-220ENST00000549347 P0DMU3 169 aa12.35□□□□□ -0.43
RAPGEF3-220ENST00000549347 FAM231AP0DMU4 169 aa12.35□□□□□ -0.43
RAPGEF3-220ENST00000549347 FAM231CP0DMU5 169 aa12.35□□□□□ -0.43
RAPGEF3-220ENST00000549347 OR4C5Q8NGB2 326 aa12.35□□□□□ -0.43
RAPGEF3-220ENST00000549347 VSIG2Q96IQ7 327 aa12.35□□□□□ -0.43
RAPGEF3-220ENST00000549347 VPS13DQ5THJ4 4388 aa12.35□□□□□ -0.43
RAPGEF3-220ENST00000549347 A0A0J9YY99 117 aa12.34□□□□□ -0.43
RAPGEF3-220ENST00000549347 K7EN84 100 aa12.34□□□□□ -0.43
RAPGEF3-220ENST00000549347 RS1O15537 224 aa12.34□□□□□ -0.43
RAPGEF3-220ENST00000549347 SLAQ13239 276 aa12.34□□□□□ -0.43
RAPGEF3-220ENST00000549347 DAZAP1Q96EP5 407 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-220ENST00000549347 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
RAPGEF3-220ENST00000549347 PRO0255Q9UI72 69 aa12.34□□□□□ -0.43
RAPGEF3-220ENST00000549347 LY96Q9Y6Y9 160 aa12.34□□□□□ -0.43
RAPGEF3-220ENST00000549347 TRGV4A0A0C4DH28 118 aa12.33□□□□□ -0.44
RAPGEF3-220ENST00000549347 CIDEAO60543 219 aa12.33□□□□□ -0.44
RAPGEF3-220ENST00000549347 CEBPGP53567 150 aa12.33□□□□□ -0.44
RAPGEF3-220ENST00000549347 CRYBA4P53673 196 aa12.33□□□□□ -0.44
RAPGEF3-220ENST00000549347 IFITM2Q01629 132 aa12.33□□□□□ -0.44
RAPGEF3-220ENST00000549347 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
RAPGEF3-220ENST00000549347 SYT8Q8NBV8 401 aa12.33□□□□□ -0.44
RAPGEF3-220ENST00000549347 OCC1Q8TAD7 63 aa12.33□□□□□ -0.44
RAPGEF3-220ENST00000549347 SMIM7Q9BQ49 75 aa12.33□□□□□ -0.44
RAPGEF3-220ENST00000549347 SNAI2O43623 268 aa12.32□□□□□ -0.44
RAPGEF3-220ENST00000549347 NXPH4O95158 308 aa12.32□□□□□ -0.44
RAPGEF3-220ENST00000549347 NUDT3O95989 172 aa12.32□□□□□ -0.44
RAPGEF3-220ENST00000549347 P01737 135 aa12.32□□□□□ -0.44
RAPGEF3-220ENST00000549347 RPS20P60866 119 aaKnown RBP12.32□□□□□ -0.44
RAPGEF3-220ENST00000549347 RAB14P61106 215 aa12.32□□□□□ -0.44
RAPGEF3-220ENST00000549347 PEA15Q15121 130 aa12.32□□□□□ -0.44
RAPGEF3-220ENST00000549347 SSBP4Q9BWG4 385 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-220ENST00000549347 HHLA3Q9XRX5 114 aa12.32□□□□□ -0.44
RAPGEF3-220ENST00000549347 PHLDA3Q9Y5J5 127 aa12.32□□□□□ -0.44
RAPGEF3-220ENST00000549347 ZNF727A8MUV8 499 aa12.31□□□□□ -0.44
RAPGEF3-220ENST00000549347 A8MWV9 139 aa12.31□□□□□ -0.44
RAPGEF3-220ENST00000549347 C9JQL5 133 aa12.31□□□□□ -0.44
RAPGEF3-220ENST00000549347 PAX4O43316 350 aa12.31□□□□□ -0.44
RAPGEF3-220ENST00000549347 OR5AL1P0C617 328 aa12.31□□□□□ -0.44
RAPGEF3-220ENST00000549347 SRSF3P84103 164 aaKnown RBP12.31□□□□□ -0.44
RAPGEF3-220ENST00000549347 CLLU1Q5K131 121 aa12.31□□□□□ -0.44
RAPGEF3-220ENST00000549347 DMRTA1Q5VZB9 504 aa12.31□□□□□ -0.44
RAPGEF3-220ENST00000549347 ZFP82Q8N141 532 aa12.31□□□□□ -0.44
RAPGEF3-220ENST00000549347 OR2D3Q8NGH3 330 aa12.31□□□□□ -0.44
RAPGEF3-220ENST00000549347 GATA1P15976 413 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF3-220ENST00000549347 A0A096LPF7 62 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 XKRY2A2RUG3 117 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 M0R381 172 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 IGLC6P0CF74 106 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 RNF212Q495C1 297 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 FAM74A3Q4VXF1 159 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 ZFP2Q6ZN57 461 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 LINC01551Q86U37 167 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 NUDT10Q8NFP7 164 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 OR10AG1Q8NH19 301 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 NUDT11Q96G61 164 aa12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 RNASE7Q9H1E1 156 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-220ENST00000549347 DNAH6Q9C0G6 4158 aa12.28□□□□□ -0.44
RAPGEF3-220ENST00000549347 UFSP1Q6NVU6 142 aa12.28□□□□□ -0.44
RAPGEF3-220ENST00000549347 FAM231DQ6ZW35 169 aa12.28□□□□□ -0.44
RAPGEF3-220ENST00000549347 RPP21Q9H633 154 aaKnown RBP12.28□□□□□ -0.44
RAPGEF3-220ENST00000549347 ICOSQ9Y6W8 199 aa12.28□□□□□ -0.44
RAPGEF3-220ENST00000549347 RHODO00212 210 aa12.27□□□□□ -0.45
RAPGEF3-220ENST00000549347 GZMBP10144 247 aa12.27□□□□□ -0.45
RAPGEF3-220ENST00000549347 UBE2DNLQ8IWF7 75 aa12.27□□□□□ -0.45
RAPGEF3-220ENST00000549347 FER1L6-AS1Q8NA97 138 aa12.27□□□□□ -0.45
RAPGEF3-220ENST00000549347 SFRP2Q96HF1 295 aa12.27□□□□□ -0.45
RAPGEF3-220ENST00000549347 JPT2Q9H910 190 aa12.27□□□□□ -0.45
RAPGEF3-220ENST00000549347 IGHV3-73A0A0B4J1V6 119 aa12.26□□□□□ -0.45
RAPGEF3-220ENST00000549347 TRBV6-4A0A1B0GX49 114 aa12.26□□□□□ -0.45
RAPGEF3-220ENST00000549347 FAM3BP58499 235 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF3-220ENST00000549347 SAMD10Q9BYL1 202 aa12.26□□□□□ -0.45
RAPGEF3-220ENST00000549347 KMT2AQ03164 3969 aa12.26□□□□□ -0.45
RAPGEF3-220ENST00000549347 CCL18P55774 89 aa12.25□□□□□ -0.45
RAPGEF3-220ENST00000549347 RHOHQ15669 191 aa12.25□□□□□ -0.45
RAPGEF3-220ENST00000549347 MRPL23Q16540 153 aaKnown RBP12.25□□□□□ -0.45
RAPGEF3-220ENST00000549347 SPANXN1Q5VSR9 72 aa12.25□□□□□ -0.45
RAPGEF3-220ENST00000549347 SLC25A29Q8N8R3 303 aa12.25□□□□□ -0.45
RAPGEF3-220ENST00000549347 A0A1W2PPQ1 181 aa12.24□□□□□ -0.45
RAPGEF3-220ENST00000549347 K7EQD1 137 aa12.24□□□□□ -0.45
RAPGEF3-220ENST00000549347 CRYGDP07320 174 aa12.24□□□□□ -0.45
RAPGEF3-220ENST00000549347 GYPEP15421 78 aa12.24□□□□□ -0.45
RAPGEF3-220ENST00000549347 CTRLP40313 264 aa12.24□□□□□ -0.45
RAPGEF3-220ENST00000549347 TMEM241Q24JQ0 296 aa12.24□□□□□ -0.45
RAPGEF3-220ENST00000549347 CT83Q5H943 113 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms