RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 A0A1B0GVG6 124 aa10.87□□□□□ -0.67
DDX54-205ENST00000548786 H3BVH4 76 aa10.87□□□□□ -0.67
DDX54-205ENST00000548786 K7EQD1 137 aa10.87□□□□□ -0.67
DDX54-205ENST00000548786 SRIP30626 198 aa10.87□□□□□ -0.67
DDX54-205ENST00000548786 MRPL23Q16540 153 aaKnown RBP10.87□□□□□ -0.67
DDX54-205ENST00000548786 CFAP126Q5VTH2 177 aa10.87□□□□□ -0.67
DDX54-205ENST00000548786 SLC51BQ86UW2 128 aa10.87□□□□□ -0.67
DDX54-205ENST00000548786 C9orf62Q8N4C0 152 aa10.87□□□□□ -0.67
DDX54-205ENST00000548786 KRTAP1-5Q9BYS1 174 aa10.87□□□□□ -0.67
DDX54-205ENST00000548786 PKD1P98161 4303 aa10.86□□□□□ -0.67
DDX54-205ENST00000548786 KRBOX1C9JBD0 128 aa10.86□□□□□ -0.67
DDX54-205ENST00000548786 SULT1A2P50226 295 aa10.86□□□□□ -0.67
DDX54-205ENST00000548786 SOHLH1Q5JUK2 328 aa10.86□□□□□ -0.67
DDX54-205ENST00000548786 TRBV6-1A0A0K0K1D8 114 aa10.85□□□□□ -0.67
DDX54-205ENST00000548786 NXPH4O95158 308 aa10.85□□□□□ -0.67
DDX54-205ENST00000548786 GATA1P15976 413 aaPredicted RBP10.85□□□□□ -0.67
DDX54-205ENST00000548786 RAB5CP51148 216 aa10.85□□□□□ -0.67
DDX54-205ENST00000548786 PRR27Q6MZM9 219 aa10.85□□□□□ -0.67
DDX54-205ENST00000548786 NEGR1Q7Z3B1 354 aa10.85□□□□□ -0.67
DDX54-205ENST00000548786 UPK3BQ9BT76 320 aa10.85□□□□□ -0.67
DDX54-205ENST00000548786 DERL1Q9BUN8 251 aa10.85□□□□□ -0.67
DDX54-205ENST00000548786 MANBALQ9NQG1 85 aa10.85□□□□□ -0.67
DDX54-205ENST00000548786 RS1O15537 224 aa10.84□□□□□ -0.67
DDX54-205ENST00000548786 NKX2-5P52952 324 aaPredicted RBP10.84□□□□□ -0.67
DDX54-205ENST00000548786 ZNF674Q2M3X9 581 aa10.84□□□□□ -0.67
DDX54-205ENST00000548786 LYPD5Q6UWN5 251 aa10.84□□□□□ -0.67
DDX54-205ENST00000548786 BAGE2Q86Y30 109 aa10.84□□□□□ -0.67
DDX54-205ENST00000548786 C6orf223Q8N319 242 aa10.84□□□□□ -0.67
DDX54-205ENST00000548786 JPT2Q9H910 190 aa10.84□□□□□ -0.67
DDX54-205ENST00000548786 PKHD1P08F94 4074 aa10.83□□□□□ -0.68
DDX54-205ENST00000548786 TRAV1-1A0A0B4J248 108 aa10.83□□□□□ -0.68
DDX54-205ENST00000548786 TEX46H3BTG2 121 aa10.83□□□□□ -0.68
DDX54-205ENST00000548786 ARMS2P0C7Q2 107 aa10.83□□□□□ -0.68
DDX54-205ENST00000548786 RPL35P42766 123 aaKnown RBP10.83□□□□□ -0.68
DDX54-205ENST00000548786 RPL19P84098 196 aaKnown RBP10.83□□□□□ -0.68
DDX54-205ENST00000548786 COX8CQ7Z4L0 72 aa10.83□□□□□ -0.68
DDX54-205ENST00000548786 SLC25A29Q8N8R3 303 aa10.83□□□□□ -0.68
DDX54-205ENST00000548786 A0A1B0GVY2 172 aa10.82□□□□□ -0.68
DDX54-205ENST00000548786 SIVA1O15304 175 aa10.82□□□□□ -0.68
DDX54-205ENST00000548786 S100A9P06702 114 aaKnown RBP10.82□□□□□ -0.68
DDX54-205ENST00000548786 TTC32Q5I0X7 151 aa10.82□□□□□ -0.68
DDX54-205ENST00000548786 DMRTA1Q5VZB9 504 aa10.82□□□□□ -0.68
DDX54-205ENST00000548786 ALKAL2Q6UX46 152 aa10.82□□□□□ -0.68
DDX54-205ENST00000548786 TXNDC17Q9BRA2 123 aa10.82□□□□□ -0.68
DDX54-205ENST00000548786 IL36BQ9NZH7 164 aa10.82□□□□□ -0.68
DDX54-205ENST00000548786 M0R381 172 aa10.81□□□□□ -0.68
DDX54-205ENST00000548786 TNP2Q05952 138 aa10.81□□□□□ -0.68
DDX54-205ENST00000548786 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
DDX54-205ENST00000548786 Q6ZSN1 163 aa10.81□□□□□ -0.68
DDX54-205ENST00000548786 SAMD10Q9BYL1 202 aa10.81□□□□□ -0.68
DDX54-205ENST00000548786 PARLQ9H300 379 aa10.81□□□□□ -0.68
DDX54-205ENST00000548786 IFNA1P01562 189 aa10.8□□□□□ -0.68
DDX54-205ENST00000548786 FAM74A4Q5TZK3 123 aa10.8□□□□□ -0.68
DDX54-205ENST00000548786 ZNF575Q86XF7 245 aa10.8□□□□□ -0.68
DDX54-205ENST00000548786 WFDC10BQ8IUB3 73 aa10.8□□□□□ -0.68
DDX54-205ENST00000548786 SYT8Q8NBV8 401 aa10.8□□□□□ -0.68
DDX54-205ENST00000548786 PTH2Q96A98 100 aa10.8□□□□□ -0.68
DDX54-205ENST00000548786 PRADC1Q9BSG0 188 aa10.8□□□□□ -0.68
DDX54-205ENST00000548786 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
DDX54-205ENST00000548786 A0A087WWL8 130 aa10.79□□□□□ -0.68
DDX54-205ENST00000548786 RAB19A4D1S5 217 aa10.79□□□□□ -0.68
DDX54-205ENST00000548786 A8MWV9 139 aa10.79□□□□□ -0.68
DDX54-205ENST00000548786 MGST1P10620 155 aaKnown RBP10.79□□□□□ -0.68
DDX54-205ENST00000548786 MEF2BQ02080 365 aaPredicted RBP10.79□□□□□ -0.68
DDX54-205ENST00000548786 RHOHQ15669 191 aa10.79□□□□□ -0.68
DDX54-205ENST00000548786 CENPWQ5EE01 88 aa10.79□□□□□ -0.68
DDX54-205ENST00000548786 C11orf52Q96A22 123 aa10.79□□□□□ -0.68
DDX54-205ENST00000548786 MLST8Q9BVC4 326 aa10.79□□□□□ -0.68
DDX54-205ENST00000548786 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
DDX54-205ENST00000548786 DNAH11Q96DT5 4516 aa10.78□□□□□ -0.68
DDX54-205ENST00000548786 MUC21A0A0G2JKD1 596 aa10.78□□□□□ -0.68
DDX54-205ENST00000548786 MUC21A0A140T8X8 626 aa10.78□□□□□ -0.68
DDX54-205ENST00000548786 BCL2P10415 239 aa10.78□□□□□ -0.68
DDX54-205ENST00000548786 SSTP61278 116 aa10.78□□□□□ -0.68
DDX54-205ENST00000548786 DNLZQ5SXM8 178 aa10.78□□□□□ -0.68
DDX54-205ENST00000548786 DYNC1H1Q14204 4646 aaKnown RBP10.77□□□□□ -0.68
DDX54-205ENST00000548786 TRBV6-4A0A1B0GX49 114 aa10.77□□□□□ -0.69
DDX54-205ENST00000548786 GAGE12JA6NER3 117 aa10.77□□□□□ -0.69
DDX54-205ENST00000548786 LINC00315P59091 139 aa10.77□□□□□ -0.69
DDX54-205ENST00000548786 GAGE1Q13065 139 aa10.77□□□□□ -0.69
DDX54-205ENST00000548786 GAGE4Q13068 117 aa10.77□□□□□ -0.69
DDX54-205ENST00000548786 GAGE5Q13069 117 aa10.77□□□□□ -0.69
DDX54-205ENST00000548786 GAGE13Q4V321 117 aa10.77□□□□□ -0.69
DDX54-205ENST00000548786 MED9Q9NWA0 146 aa10.77□□□□□ -0.69
DDX54-205ENST00000548786 A0A1W2PPQ1 181 aa10.76□□□□□ -0.69
DDX54-205ENST00000548786 CIDEAO60543 219 aa10.76□□□□□ -0.69
DDX54-205ENST00000548786 GNG4P50150 75 aa10.76□□□□□ -0.69
DDX54-205ENST00000548786 C14orf178Q8N769 122 aaPredicted RBP10.76□□□□□ -0.69
DDX54-205ENST00000548786 SCRT2Q9NQ03 307 aa10.76□□□□□ -0.69
DDX54-205ENST00000548786 Q9UF83 564 aa10.76□□□□□ -0.69
DDX54-205ENST00000548786 TNFRSF18Q9Y5U5 241 aa10.76□□□□□ -0.69
DDX54-205ENST00000548786 LY96Q9Y6Y9 160 aa10.76□□□□□ -0.69
DDX54-205ENST00000548786 PDE6DO43924 150 aa10.75□□□□□ -0.69
DDX54-205ENST00000548786 IGLV2-8P01709 118 aa10.75□□□□□ -0.69
DDX54-205ENST00000548786 PIK3CD-AS1Q5SR53 167 aa10.75□□□□□ -0.69
DDX54-205ENST00000548786 UFSP1Q6NVU6 142 aa10.75□□□□□ -0.69
DDX54-205ENST00000548786 ZFP2Q6ZN57 461 aa10.75□□□□□ -0.69
DDX54-205ENST00000548786 ZFP82Q8N141 532 aa10.75□□□□□ -0.69
DDX54-205ENST00000548786 OR10AG1Q8NH19 301 aa10.75□□□□□ -0.69
DDX54-205ENST00000548786 VAX2Q9UIW0 290 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms