RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 IGKV1-6A0A0C4DH72 117 aa4.33□□□□□ -1.72
PTPRB-206ENST00000548122 IGHG2P01859 326 aa4.33□□□□□ -1.72
PTPRB-206ENST00000548122 C15orf32Q32M92 178 aa4.33□□□□□ -1.72
PTPRB-206ENST00000548122 PRR31Q5SQ13 230 aa4.33□□□□□ -1.72
PTPRB-206ENST00000548122 APRG1Q8IVJ8 170 aa4.33□□□□□ -1.72
PTPRB-206ENST00000548122 ZNF257Q9Y2Q1 563 aa4.33□□□□□ -1.72
PTPRB-206ENST00000548122 FSHBP01225 129 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 PFN1P07737 140 aaKnown RBP4.32□□□□□ -1.72
PTPRB-206ENST00000548122 MYCNOSP40205 109 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 TCTEX1D4Q5JR98 221 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 C9orf66Q5T8R8 295 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 LHFPL1Q86WI0 220 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 PGLYRP4Q96LB8 373 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 C21orf62Q9NYP8 219 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 LINC00473A8K010 186 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 CGB3P0DN86 165 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 CGB7P0DN87 165 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 ATP5G3P48201 142 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 MPV17L2Q567V2 206 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 MUC21Q5SSG8 566 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 SPATA31B1PQ5VZV4 182 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 TEX43Q6ZNM6 134 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 Q6ZVQ6 151 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 PHLDA1Q8WV24 401 aaPredicted RBP4.32□□□□□ -1.72
PTPRB-206ENST00000548122 MRPL32Q9BYC8 188 aaKnown RBP4.32□□□□□ -1.72
PTPRB-206ENST00000548122 ZFHX4Q86UP3 3567 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 CR1P17927 2039 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 H3BUT2 72 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 TSPOP30536 169 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 ZNF137PP52743 207 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 Q6ZWC4 215 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 FER1L6-AS1Q8NA97 138 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 ANAPC10Q9UM13 185 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 IGHV3OR16-8A0A075B7F1 116 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 TRAV8-3A0A0A6YYJ7 113 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 HYPMO75409 117 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 IGHV3-48P01763 117 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 TMEM167AQ8TBQ9 72 aa4.32□□□□□ -1.72
PTPRB-206ENST00000548122 A0A1W2PS18 150 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 SMKR1H3BMG3 65 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 LEPROTL1O95214 131 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 FGF6P10767 208 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 XGP55808 180 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 TPSG1Q9NRR2 321 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 IGHV3OR16-13A0A075B7E8 117 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 IGHV3-49A0A0A0MS15 119 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 IGHV7-81A0A0B4J1V7 117 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 IGHV3-74A0A0B4J1X5 117 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 FAM223BA6NKX1 122 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 WIPF1O43516 503 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 LINC00869P0C866 280 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 PPIFP30405 207 aaKnown RBP4.31□□□□□ -1.72
PTPRB-206ENST00000548122 C10orf113Q5VZT2 155 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 FAM223AQ8IWN6 122 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 GNB1LQ9BYB4 327 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 C16orf95Q9H693 158 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 LINC00574Q9H8X3 128 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 TRAV9-2A0A087WT02 112 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 IGLL1P15814 213 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 HOXD3P31249 432 aaPredicted RBP4.31□□□□□ -1.72
PTPRB-206ENST00000548122 PROK1P58294 105 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 LYZP61626 148 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 OR8A1Q8NGG7 326 aa4.31□□□□□ -1.72
PTPRB-206ENST00000548122 NXT2Q9NPJ8 142 aaKnown RBP4.31□□□□□ -1.72
PTPRB-206ENST00000548122 ZNF324O75467 553 aaPredicted RBP4.3□□□□□ -1.72
PTPRB-206ENST00000548122 LGALS1P09382 135 aaKnown RBP4.3□□□□□ -1.72
PTPRB-206ENST00000548122 C3orf79P0CE67 100 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 NMUP48645 174 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 TNP2Q05952 138 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 IL36BQ9NZH7 164 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 SCO2A0A1W2PP80 73 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 A0A1W2PRE2 83 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 NUPR1O60356 82 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 SMIM13P0DJ93 91 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 ARL14EPLP0DKL9 152 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 IGLC2P0DOY2 106 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 IGLC3P0DOY3 106 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 FOXA3P55318 350 aaPredicted RBP4.3□□□□□ -1.72
PTPRB-206ENST00000548122 HIST1H4AP62805 103 aaKnown RBP4.3□□□□□ -1.72
PTPRB-206ENST00000548122 IBA57Q5T440 356 aaKnown RBP4.3□□□□□ -1.72
PTPRB-206ENST00000548122 CRIP3Q6Q6R5 217 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 C10orf99Q6UWK7 81 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 Q6ZS46 218 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 ZNRF2Q8NHG8 242 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 DDB2Q92466 427 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 ZNF706Q9Y5V0 76 aaPredicted RBP4.3□□□□□ -1.72
PTPRB-206ENST00000548122 MUC21A0A0G2JKD1 596 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 MUC21A0A140T8X8 626 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 FNDC10F2Z333 226 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 LY6LH3BQJ8 138 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 PRB2P02812 416 aaPredicted RBP4.3□□□□□ -1.72
PTPRB-206ENST00000548122 NPPCP23582 126 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 LINC00310P59036 64 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 ZNF585BQ52M93 769 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 SUMO4Q6EEV6 95 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 NPBQ8NG41 125 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 CHCHD1Q96BP2 118 aaKnown RBP4.3□□□□□ -1.72
PTPRB-206ENST00000548122 AGMATQ9BSE5 352 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 MGAM2Q2M2H8 2515 aa4.3□□□□□ -1.72
PTPRB-206ENST00000548122 TACC2O95359 2948 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms