RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PGPEP1LA6NFU8 196 aa10.12□□□□□ -0.79
DDX54-203ENST00000546869 RS1O15537 224 aa10.12□□□□□ -0.79
DDX54-203ENST00000546869 P0DMU3 169 aa10.12□□□□□ -0.79
DDX54-203ENST00000546869 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
DDX54-203ENST00000546869 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
DDX54-203ENST00000546869 MGST1P10620 155 aaKnown RBP10.12□□□□□ -0.79
DDX54-203ENST00000546869 PRR27Q6MZM9 219 aa10.12□□□□□ -0.79
DDX54-203ENST00000546869 OR4C5Q8NGB2 326 aa10.12□□□□□ -0.79
DDX54-203ENST00000546869 OCC1Q8TAD7 63 aa10.12□□□□□ -0.79
DDX54-203ENST00000546869 DAZAP1Q96EP5 407 aaKnown RBP10.12□□□□□ -0.79
DDX54-203ENST00000546869 ZNF479Q96JC4 524 aa10.12□□□□□ -0.79
DDX54-203ENST00000546869 PRO0255Q9UI72 69 aa10.12□□□□□ -0.79
DDX54-203ENST00000546869 GRIFINA4D1Z8 144 aa10.11□□□□□ -0.79
DDX54-203ENST00000546869 RPS20P60866 119 aaKnown RBP10.11□□□□□ -0.79
DDX54-203ENST00000546869 RAB14P61106 215 aa10.11□□□□□ -0.79
DDX54-203ENST00000546869 PEA15Q15121 130 aa10.11□□□□□ -0.79
DDX54-203ENST00000546869 RNF212Q495C1 297 aa10.11□□□□□ -0.79
DDX54-203ENST00000546869 PCNPQ8WW12 178 aaKnown RBP10.11□□□□□ -0.79
DDX54-203ENST00000546869 VSIG2Q96IQ7 327 aa10.11□□□□□ -0.79
DDX54-203ENST00000546869 HHLA3Q9XRX5 114 aa10.11□□□□□ -0.79
DDX54-203ENST00000546869 A8MWV9 139 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 H3BVH4 76 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 SNAI2O43623 268 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 LY6G6CO95867 125 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 OR5AL1P0C617 328 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 CRYBA4P53673 196 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 FAM74A3Q4VXF1 159 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 CFAP126Q5VTH2 177 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 SYT8Q8NBV8 401 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 LYSTQ99698 3801 aa10.1□□□□□ -0.79
DDX54-203ENST00000546869 TMSB15BA0A087X1C1 80 aa10.09□□□□□ -0.79
DDX54-203ENST00000546869 TRGV4A0A0C4DH28 118 aa10.09□□□□□ -0.79
DDX54-203ENST00000546869 P01737 135 aa10.09□□□□□ -0.79
DDX54-203ENST00000546869 IGHV3-53P01767 116 aa10.09□□□□□ -0.79
DDX54-203ENST00000546869 SFTA3P0C7M3 94 aa10.09□□□□□ -0.79
DDX54-203ENST00000546869 FAM3BP58499 235 aaPredicted RBP10.09□□□□□ -0.79
DDX54-203ENST00000546869 RPL19P84098 196 aaKnown RBP10.09□□□□□ -0.79
DDX54-203ENST00000546869 FAM231DQ6ZW35 169 aa10.09□□□□□ -0.79
DDX54-203ENST00000546869 PHLDA3Q9Y5J5 127 aa10.09□□□□□ -0.79
DDX54-203ENST00000546869 MUC4Q99102 2169 aa10.09□□□□□ -0.79
DDX54-203ENST00000546869 A0A0J9YY99 117 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 XKRY2A2RUG3 117 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 K7EN84 100 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 PAX4O43316 350 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 NXPH4O95158 308 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 NUDT3O95989 172 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 IFITM2Q01629 132 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 CLLU1Q5K131 121 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 DMRTA1Q5VZB9 504 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 ZFP82Q8N141 532 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 NUDT10Q8NFP7 164 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 NUDT11Q96G61 164 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 SMIM7Q9BQ49 75 aa10.08□□□□□ -0.8
DDX54-203ENST00000546869 ZNF727A8MUV8 499 aa10.07□□□□□ -0.8
DDX54-203ENST00000546869 IGLC6P0CF74 106 aa10.07□□□□□ -0.8
DDX54-203ENST00000546869 GATA1P15976 413 aaPredicted RBP10.07□□□□□ -0.8
DDX54-203ENST00000546869 UFSP1Q6NVU6 142 aa10.07□□□□□ -0.8
DDX54-203ENST00000546869 OR2D3Q8NGH3 330 aa10.07□□□□□ -0.8
DDX54-203ENST00000546869 SFRP2Q96HF1 295 aa10.07□□□□□ -0.8
DDX54-203ENST00000546869 A0A096LPF7 62 aa10.06□□□□□ -0.8
DDX54-203ENST00000546869 TRBV6-4A0A1B0GX49 114 aa10.06□□□□□ -0.8
DDX54-203ENST00000546869 C9JQL5 133 aa10.06□□□□□ -0.8
DDX54-203ENST00000546869 CEBPGP53567 150 aa10.06□□□□□ -0.8
DDX54-203ENST00000546869 SRSF3P84103 164 aaKnown RBP10.06□□□□□ -0.8
DDX54-203ENST00000546869 LINC01551Q86U37 167 aa10.06□□□□□ -0.8
DDX54-203ENST00000546869 A0A1W2PPQ1 181 aa10.05□□□□□ -0.8
DDX54-203ENST00000546869 F2Z2F3 143 aa10.05□□□□□ -0.8
DDX54-203ENST00000546869 RHODO00212 210 aa10.05□□□□□ -0.8
DDX54-203ENST00000546869 CCL18P55774 89 aa10.05□□□□□ -0.8
DDX54-203ENST00000546869 MRPL23Q16540 153 aaKnown RBP10.05□□□□□ -0.8
DDX54-203ENST00000546869 TMEM241Q24JQ0 296 aa10.05□□□□□ -0.8
DDX54-203ENST00000546869 WDR73Q6P4I2 378 aa10.05□□□□□ -0.8
DDX54-203ENST00000546869 ICOSQ9Y6W8 199 aa10.05□□□□□ -0.8
DDX54-203ENST00000546869 M0R381 172 aa10.04□□□□□ -0.8
DDX54-203ENST00000546869 CRYGDP07320 174 aa10.04□□□□□ -0.8
DDX54-203ENST00000546869 CT83Q5H943 113 aa10.04□□□□□ -0.8
DDX54-203ENST00000546869 FER1L6-AS1Q8NA97 138 aa10.04□□□□□ -0.8
DDX54-203ENST00000546869 OR10AG1Q8NH19 301 aa10.04□□□□□ -0.8
DDX54-203ENST00000546869 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
DDX54-203ENST00000546869 RPP21Q9H633 154 aaKnown RBP10.04□□□□□ -0.8
DDX54-203ENST00000546869 ALMS1Q8TCU4 4167 aa10.04□□□□□ -0.8
DDX54-203ENST00000546869 K7EQD1 137 aa10.03□□□□□ -0.8
DDX54-203ENST00000546869 CACNG7P62955 275 aa10.03□□□□□ -0.8
DDX54-203ENST00000546869 SH2D6Q7Z4S9 175 aa10.03□□□□□ -0.8
DDX54-203ENST00000546869 SLC25A29Q8N8R3 303 aa10.03□□□□□ -0.8
DDX54-203ENST00000546869 JPT2Q9H910 190 aa10.03□□□□□ -0.8
DDX54-203ENST00000546869 OSTCQ9NRP0 149 aa10.03□□□□□ -0.8
DDX54-203ENST00000546869 NAT8Q9UHE5 227 aa10.03□□□□□ -0.8
DDX54-203ENST00000546869 GATCO43716 136 aaKnown RBP10.02□□□□□ -0.81
DDX54-203ENST00000546869 FOXA3P55318 350 aaPredicted RBP10.02□□□□□ -0.81
DDX54-203ENST00000546869 ERVFC1-1P60608 527 aa10.02□□□□□ -0.81
DDX54-203ENST00000546869 RHOHQ15669 191 aa10.02□□□□□ -0.81
DDX54-203ENST00000546869 ESRGQ1W209 222 aa10.02□□□□□ -0.81
DDX54-203ENST00000546869 SOHLH1Q5JUK2 328 aa10.02□□□□□ -0.81
DDX54-203ENST00000546869 SPANXN1Q5VSR9 72 aa10.02□□□□□ -0.81
DDX54-203ENST00000546869 NEGR1Q7Z3B1 354 aa10.02□□□□□ -0.81
DDX54-203ENST00000546869 UBE2DNLQ8IWF7 75 aa10.02□□□□□ -0.81
DDX54-203ENST00000546869 PRADC1Q9BSG0 188 aa10.02□□□□□ -0.81
DDX54-203ENST00000546869 CNFNQ9BYD5 112 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms