RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 LINC00322Q6ZN03 302 aaPredicted RBP9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 LAMTOR3Q9UHA4 124 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 PCDH15Q96QU1 1955 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 TRAV12-1A0A0B4J245 112 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 ODF1Q14990 250 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 UTF1Q5T230 341 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 ZGRF1Q86YA3 2104 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 XCL2Q9UBD3 114 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 PLCE1Q9P212 2302 aa9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 BDP1A6H8Y1 2624 aa9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 RPL35AP18077 110 aaKnown RBP9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 SEM1Q6ZVN7 128 aa9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 MUC6Q6W4X9 2439 aa9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 IGHV3-38A0A0C4DH36 116 aa9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 GAGE12JA6NER3 117 aa9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 GAGE4Q13068 117 aa9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 GAGE5Q13069 117 aa9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 SPANXDQ9BXN6 97 aa9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 SPAG8Q99932 426 aaPredicted RBP9.5□□□□□ -0.89
NPC1L1-204ENST00000546276 PRAC2D3DTV9 90 aa9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 G3V4G9 280 aa9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 ZNRF2Q8NHG8 242 aa9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 MLST8Q9BVC4 326 aa9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 TCTEX1D4Q5JR98 221 aa9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 C15orf53Q8NAA6 179 aa9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 ZNF48Q96MX3 618 aaPredicted RBP9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 LINC00574Q9H8X3 128 aa9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 CENPVL3A0A0U1RRI6 287 aa9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 A0A1W2PNU3 283 aaPredicted RBP9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 VWC2LB2RUY7 222 aa9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 SS18Q15532 418 aa9.49□□□□□ -0.89
NPC1L1-204ENST00000546276 SOCS3O14543 225 aa9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 NSUN5P1Q3KNT7 163 aa9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 MED12LQ86YW9 2145 aa9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 LOXL1Q08397 574 aaPredicted RBP9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 GAGE7O76087 117 aa9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 GAGE12FP0CL80 117 aa9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 GAGE12GP0CL81 117 aa9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 GAGE12IP0CL82 117 aa9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 HERVK_113P63121 156 aa9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 RNASE13Q5GAN3 156 aaKnown RBP9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 ZFP2Q6ZN57 461 aa9.48□□□□□ -0.89
NPC1L1-204ENST00000546276 LINC01619G3V211 115 aa9.47□□□□□ -0.89
NPC1L1-204ENST00000546276 C1orf229Q6ZS94 237 aaPredicted RBP9.47□□□□□ -0.89
NPC1L1-204ENST00000546276 TEN1Q86WV5 123 aa9.47□□□□□ -0.89
NPC1L1-204ENST00000546276 ZFHX2Q9C0A1 2572 aaPredicted RBP9.47□□□□□ -0.89
NPC1L1-204ENST00000546276 E9PLD3 99 aa9.46□□□□□ -0.89
NPC1L1-204ENST00000546276 IGHG4P01861 327 aa9.46□□□□□ -0.89
NPC1L1-204ENST00000546276 C16orf54Q6UWD8 224 aa9.46□□□□□ -0.89
NPC1L1-204ENST00000546276 C9orf47Q6ZRZ4 202 aa9.46□□□□□ -0.89
NPC1L1-204ENST00000546276 TOMM6Q96B49 74 aa9.46□□□□□ -0.89
NPC1L1-204ENST00000546276 TMEM243Q9BU79 118 aa9.46□□□□□ -0.89
NPC1L1-204ENST00000546276 ANKRD29Q8N6D5 301 aa9.46□□□□□ -0.9
NPC1L1-204ENST00000546276 GRNP28799 593 aaKnown RBP9.46□□□□□ -0.9
NPC1L1-204ENST00000546276 Q8N9W7 124 aa9.46□□□□□ -0.9
NPC1L1-204ENST00000546276 TNCP24821 2201 aa9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 A4D1N5 150 aa9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 WISP2O76076 250 aa9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 PFN2P35080 140 aa9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 MUC22E2RYF6 1773 aaPredicted RBP9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 NUP210LQ5VU65 1888 aa9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 GAGE6Q13070 117 aa9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 TRAV13-2A0A0B4J235 113 aa9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 PRSS47A8MTI9 375 aa9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 TP73-AS1Q9UF72 201 aa9.45□□□□□ -0.9
NPC1L1-204ENST00000546276 DEFB130BP0DP73 79 aa9.44□□□□□ -0.9
NPC1L1-204ENST00000546276 DEFB130AP0DP74 79 aa9.44□□□□□ -0.9
NPC1L1-204ENST00000546276 FOXI1Q12951 378 aa9.44□□□□□ -0.9
NPC1L1-204ENST00000546276 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
NPC1L1-204ENST00000546276 A0A0J9YXV3 536 aa9.44□□□□□ -0.9
NPC1L1-204ENST00000546276 FANCD2OSQ96PS1 177 aa9.44□□□□□ -0.9
NPC1L1-204ENST00000546276 B5MCH6 92 aa9.43□□□□□ -0.9
NPC1L1-204ENST00000546276 ELANEP08246 267 aa9.43□□□□□ -0.9
NPC1L1-204ENST00000546276 CFHR3Q02985 330 aa9.43□□□□□ -0.9
NPC1L1-204ENST00000546276 Q8N7P7 452 aa9.43□□□□□ -0.9
NPC1L1-204ENST00000546276 MED14OSP0DP75 135 aa9.43□□□□□ -0.9
NPC1L1-204ENST00000546276 IGF2-ASQ6U949 168 aa9.43□□□□□ -0.9
NPC1L1-204ENST00000546276 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.42□□□□□ -0.9
NPC1L1-204ENST00000546276 IGKV2-29A2NJV5 120 aaPredicted RBP9.42□□□□□ -0.9
NPC1L1-204ENST00000546276 RPL39P62891 51 aaKnown RBP9.42□□□□□ -0.9
NPC1L1-204ENST00000546276 Q9H8V8 135 aa9.42□□□□□ -0.9
NPC1L1-204ENST00000546276 RNF114Q9Y508 228 aa9.42□□□□□ -0.9
NPC1L1-204ENST00000546276 ZNF80P51504 273 aaPredicted RBP9.42□□□□□ -0.9
NPC1L1-204ENST00000546276 TIMM17AQ99595 171 aa9.42□□□□□ -0.9
NPC1L1-204ENST00000546276 DAZAP2Q15038 168 aaPredicted RBP9.42□□□□□ -0.9
NPC1L1-204ENST00000546276 LINC01620Q4KN68 170 aa9.42□□□□□ -0.9
NPC1L1-204ENST00000546276 C11orf86A6NJI1 115 aa9.41□□□□□ -0.9
NPC1L1-204ENST00000546276 DPH3Q96FX2 82 aa9.41□□□□□ -0.9
NPC1L1-204ENST00000546276 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
NPC1L1-204ENST00000546276 ATP6V0E2Q8NHE4 81 aa9.41□□□□□ -0.9
NPC1L1-204ENST00000546276 IGLC6P0CF74 106 aa9.4□□□□□ -0.9
NPC1L1-204ENST00000546276 AJUBAQ96IF1 538 aa9.4□□□□□ -0.9
NPC1L1-204ENST00000546276 MYCNOSP40205 109 aa9.4□□□□□ -0.9
NPC1L1-204ENST00000546276 SS18L2Q9UHA2 77 aa9.4□□□□□ -0.9
NPC1L1-204ENST00000546276 CUL9Q8IWT3 2517 aa9.4□□□□□ -0.9
NPC1L1-204ENST00000546276 ACYP1P07311 99 aa9.4□□□□□ -0.9
NPC1L1-204ENST00000546276 RBX1P62877 108 aa9.4□□□□□ -0.9
NPC1L1-204ENST00000546276 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms