RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 ISOC2Q96AB3 205 aa8.46□□□□□ -1.06
LTBR-214ENST00000545445 NDUFAF3Q9BU61 184 aa8.46□□□□□ -1.06
LTBR-214ENST00000545445 RPP21Q9H633 154 aaKnown RBP8.46□□□□□ -1.06
LTBR-214ENST00000545445 OSTCQ9NRP0 149 aa8.46□□□□□ -1.06
LTBR-214ENST00000545445 IL36BQ9NZH7 164 aa8.46□□□□□ -1.06
LTBR-214ENST00000545445 MDFICQ9P1T7 246 aa8.46□□□□□ -1.06
LTBR-214ENST00000545445 DKK2Q9UBU2 259 aa8.46□□□□□ -1.06
LTBR-214ENST00000545445 GATCO43716 136 aaKnown RBP8.45□□□□□ -1.06
LTBR-214ENST00000545445 MED14OSP0DP75 135 aa8.45□□□□□ -1.06
LTBR-214ENST00000545445 CT83Q5H943 113 aa8.45□□□□□ -1.06
LTBR-214ENST00000545445 FAM222AQ5U5X8 452 aa8.45□□□□□ -1.06
LTBR-214ENST00000545445 C11orf45Q8TAV5 145 aa8.45□□□□□ -1.06
LTBR-214ENST00000545445 PTH2Q96A98 100 aa8.45□□□□□ -1.06
LTBR-214ENST00000545445 SFRP2Q96HF1 295 aa8.45□□□□□ -1.06
LTBR-214ENST00000545445 RNASE7Q9H1E1 156 aaKnown RBP8.45□□□□□ -1.06
LTBR-214ENST00000545445 NOP10Q9NPE3 64 aaKnown RBP8.45□□□□□ -1.06
LTBR-214ENST00000545445 DNAH11Q96DT5 4516 aa8.44□□□□□ -1.06
LTBR-214ENST00000545445 DNAH6Q9C0G6 4158 aa8.44□□□□□ -1.06
LTBR-214ENST00000545445 FAT2Q9NYQ8 4349 aa8.44□□□□□ -1.06
LTBR-214ENST00000545445 TMSB15BA0A087X1C1 80 aa8.44□□□□□ -1.06
LTBR-214ENST00000545445 A0A1W2PPQ1 181 aa8.44□□□□□ -1.06
LTBR-214ENST00000545445 A8MWL6 223 aa8.44□□□□□ -1.06
LTBR-214ENST00000545445 M0R2P5 195 aa8.44□□□□□ -1.06
LTBR-214ENST00000545445 SPINK4O60575 86 aa8.44□□□□□ -1.06
LTBR-214ENST00000545445 RNASE3P12724 160 aaKnown RBP8.44□□□□□ -1.06
LTBR-214ENST00000545445 PIK3CD-AS1Q5SR53 167 aa8.44□□□□□ -1.06
LTBR-214ENST00000545445 C9orf85Q96MD7 179 aa8.44□□□□□ -1.06
LTBR-214ENST00000545445 GRIFINA4D1Z8 144 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 NUPR2A6NF83 97 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 PPP1R2P9O14990 202 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 OR5AL1P0C617 328 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 ARMS2P0C7Q2 107 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 ADCYAP1P18509 176 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 RPL19P84098 196 aaKnown RBP8.43□□□□□ -1.06
LTBR-214ENST00000545445 C10orf91Q5T1B1 145 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 ZNF575Q86XF7 245 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 LINC00612Q8N6U2 182 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 OR10G8Q8NGN5 311 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 RASL10AQ92737 203 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 C18orf15Q96N68 181 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 SCRT2Q9NQ03 307 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 DNAH2Q9P225 4427 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 PKHD1P08F94 4074 aa8.43□□□□□ -1.06
LTBR-214ENST00000545445 TRGV1A0A0A0MS02 117 aa8.42□□□□□ -1.06
LTBR-214ENST00000545445 FAM231BA6NCW3 169 aa8.42□□□□□ -1.06
LTBR-214ENST00000545445 F2Z2F3 143 aa8.42□□□□□ -1.06
LTBR-214ENST00000545445 H3BVH4 76 aa8.42□□□□□ -1.06
LTBR-214ENST00000545445 SNAI2O43623 268 aa8.42□□□□□ -1.06
LTBR-214ENST00000545445 DAD1P61803 113 aa8.42□□□□□ -1.06
LTBR-214ENST00000545445 SYT8Q8NBV8 401 aa8.42□□□□□ -1.06
LTBR-214ENST00000545445 SSBP4Q9BWG4 385 aaPredicted RBP8.42□□□□□ -1.06
LTBR-214ENST00000545445 GFRA4Q9GZZ7 299 aa8.42□□□□□ -1.06
LTBR-214ENST00000545445 CELA1Q9UNI1 258 aa8.42□□□□□ -1.06
LTBR-214ENST00000545445 CARHSP1Q9Y2V2 147 aaKnown RBP8.42□□□□□ -1.06
LTBR-214ENST00000545445 PHLDA3Q9Y5J5 127 aa8.42□□□□□ -1.06
LTBR-214ENST00000545445 MT-ND4LP03901 98 aa8.41□□□□□ -1.06
LTBR-214ENST00000545445 IGLC6P0CF74 106 aa8.41□□□□□ -1.06
LTBR-214ENST00000545445 ZNF876PQ49A33 203 aa8.41□□□□□ -1.06
LTBR-214ENST00000545445 CEMP1Q6PRD7 247 aaPredicted RBP8.41□□□□□ -1.06
LTBR-214ENST00000545445 Q6ZTI0 123 aa8.41□□□□□ -1.06
LTBR-214ENST00000545445 ZFP82Q8N141 532 aa8.41□□□□□ -1.06
LTBR-214ENST00000545445 FER1L6-AS1Q8NA97 138 aa8.41□□□□□ -1.06
LTBR-214ENST00000545445 TSKUQ8WUA8 353 aa8.41□□□□□ -1.06
LTBR-214ENST00000545445 ANAPC16Q96DE5 110 aa8.41□□□□□ -1.06
LTBR-214ENST00000545445 V9GYV3 84 aa8.41□□□□□ -1.06
LTBR-214ENST00000545445 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 GAGE12BA1L429 117 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 CIDEAO60543 219 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 GAGE7O76087 117 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 GAGE12FP0CL80 117 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 GAGE12GP0CL81 117 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 GAGE12IP0CL82 117 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 DEFB130BP0DP73 79 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 DEFB130AP0DP74 79 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 FOXA3P55318 350 aaPredicted RBP8.4□□□□□ -1.06
LTBR-214ENST00000545445 CACNG7P62955 275 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 C12orf74Q32Q52 190 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 WDR73Q6P4I2 378 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 DNAH17Q9UFH2 4485 aa8.4□□□□□ -1.06
LTBR-214ENST00000545445 A8MWV9 139 aa8.39□□□□□ -1.07
LTBR-214ENST00000545445 GZMBP10144 247 aa8.39□□□□□ -1.07
LTBR-214ENST00000545445 NANOS2P60321 138 aaKnown RBP8.39□□□□□ -1.07
LTBR-214ENST00000545445 SPANXN1Q5VSR9 72 aa8.39□□□□□ -1.07
LTBR-214ENST00000545445 SLC7A5P1Q8MH63 180 aa8.39□□□□□ -1.07
LTBR-214ENST00000545445 MRPL16Q9NX20 251 aaKnown RBP8.39□□□□□ -1.07
LTBR-214ENST00000545445 IGHV4-4A0A075B6R2 117 aa8.38□□□□□ -1.07
LTBR-214ENST00000545445 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
LTBR-214ENST00000545445 NXPH4O95158 308 aa8.38□□□□□ -1.07
LTBR-214ENST00000545445 ATP5G1P05496 136 aa8.38□□□□□ -1.07
LTBR-214ENST00000545445 CTRLP40313 264 aa8.38□□□□□ -1.07
LTBR-214ENST00000545445 RNF212Q495C1 297 aa8.38□□□□□ -1.07
LTBR-214ENST00000545445 SVBPQ8N300 66 aa8.38□□□□□ -1.07
LTBR-214ENST00000545445 TPPP3Q9BW30 176 aa8.38□□□□□ -1.07
LTBR-214ENST00000545445 CNFNQ9BYD5 112 aa8.38□□□□□ -1.07
LTBR-214ENST00000545445 CTDSP1Q9GZU7 261 aa8.38□□□□□ -1.07
LTBR-214ENST00000545445 KLK5Q9Y337 293 aaPredicted RBP8.38□□□□□ -1.07
LTBR-214ENST00000545445 TRAV10A0A0B4J240 114 aa8.37□□□□□ -1.07
LTBR-214ENST00000545445 SMIM27A0A1W2PRY6 76 aa8.37□□□□□ -1.07
LTBR-214ENST00000545445 HIGD1CA8MV81 97 aa8.37□□□□□ -1.07
LTBR-214ENST00000545445 M0R381 172 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms