RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	RPL7L1	Q6DKI1	246 aa	Known RBP	4.81	□□□□□ -1.64
LDHA-223	ENST00000545215	SIGLEC15	Q6ZMC9	328 aa		4.81	□□□□□ -1.64
LDHA-223	ENST00000545215	MRPL32	Q9BYC8	188 aa	Known RBP	4.81	□□□□□ -1.64
LDHA-223	ENST00000545215	VCX2	Q9H322	139 aa		4.81	□□□□□ -1.64
LDHA-223	ENST00000545215	SMDT1	Q9H4I9	107 aa		4.81	□□□□□ -1.64
LDHA-223	ENST00000545215	WFDC1	Q9HC57	220 aa		4.81	□□□□□ -1.64
LDHA-223	ENST00000545215	VAX2	Q9UIW0	290 aa		4.81	□□□□□ -1.64
LDHA-223	ENST00000545215	IGHV4-4	A0A075B6R2	117 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	TRAV2	A0A0B4J234	112 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	IGHV3-35	A0A0C4DH35	117 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215		A0A0U1RQV1	116 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	TMEM213	A2RRL7	107 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	BUB3	O43684	328 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST1H2BK	O60814	126 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	APOH	P02749	345 aa	Predicted RBP	4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST1H2BJ	P06899	126 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	OR5G3	P0C626	314 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	RPL7	P18124	248 aa	Known RBP	4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	ORM2	P19652	201 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	CBLN1	P23435	193 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST1H2BO	P23527	126 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	ATP6V0C	P27449	155 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST1H2BB	P33778	126 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST1H2BD	P58876	126 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	TAS2R45	P59539	299 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	RHOB	P62745	196 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST1H2BC	P62807	126 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	PAFAH1B2	P68402	229 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	GAGE5	Q13069	117 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	GAGE6	Q13070	117 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST2H2BE	Q16778	126 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	FFAR4	Q5NUL3	377 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	C10orf113	Q5VZT2	155 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	MIC13	Q5XKP0	118 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	UNQ9165/PRO28630	Q6UXU0	137 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	DPPA3	Q6W0C5	159 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	FAM24B	Q8N5W8	94 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	OR1B1	Q8NGR6	318 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	C11orf45	Q8TAV5	145 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST1H2BH	Q93079	126 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST1H2BN	Q99877	126 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	HIST1H2BM	Q99879	126 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	SHANK2-AS3	Q9BTD1	123 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	RHPN1-AS1	Q9BWJ2	59 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	VSIR	Q9H7M9	311 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	CYTL1	Q9NRR1	136 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	TNFRSF18	Q9Y5U5	241 aa		4.8	□□□□□ -1.64
LDHA-223	ENST00000545215	OR11H12	B2RN74	326 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	C11orf94	C9JXX5	98 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215		H3BRN7	92 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	CHEK1	O14757	476 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	CD7	P09564	240 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	GALR1	P47211	349 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	CRYBA4	P53673	196 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	CMC4	P56277	68 aa	Predicted RBP	4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	DEFB114	Q30KQ6	69 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	TMEM41B	Q5BJD5	291 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	COA6	Q5JTJ3	125 aa	Known RBP	4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	LINC00305	Q7Z4B0	112 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	BPIFA4P	Q86YQ2	179 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	OR8I2	Q8N0Y5	310 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	OR11H2	Q8NH07	326 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	SPAG8	Q99932	426 aa	Predicted RBP	4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	RSG1	Q9BU20	258 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	KRTAP9-3	Q9BYQ3	159 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	SPANXA1	Q9NS26	97 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215	FUT9	Q9Y231	359 aa		4.79	□□□□□ -1.64
LDHA-223	ENST00000545215		A0A1B0GW15	77 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	OR4C46	A6NHA9	309 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215		B4DEV8	164 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	OR7C2	O60412	319 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	AMBP	P02760	352 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	GATA2	P23769	480 aa	Predicted RBP	4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	COX19	Q49B96	90 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	FAM78B	Q5VT40	261 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	OR10G4	Q8NGN3	311 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	OR10G9	Q8NGN4	311 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	OR10G7	Q8NGN6	311 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	TMEM37	Q8WXS4	190 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	ZNF414	Q96IQ9	312 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	YPEL4	Q96NS1	127 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	KRTAP4-11	Q9BYQ6	195 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	WFDC10A	Q9H1F0	79 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	TMEM14C	Q9P0S9	112 aa		4.78	□□□□□ -1.64
LDHA-223	ENST00000545215	IGLV5-45	A0A087WSX0	123 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	CTXND1	A0A1B0GTU2	59 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	ZNF253	O75346	499 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	SMIM17	P0DL12	118 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	CNN1	P51911	297 aa	Known RBP	4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	CKS1B	P61024	79 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	PDE6H	Q13956	83 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	BATF	Q16520	125 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	PATE2	Q6UY27	113 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	NIT1	Q86X76	327 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	TMEM61	Q8N0U2	210 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	ISOC2	Q96AB3	205 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	NRN1	Q9NPD7	142 aa		4.77	□□□□□ -1.65
LDHA-223	ENST00000545215	SELENOK	Q9Y6D0	94 aa		4.77	□□□□□ -1.65

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