RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 A0A087WX48 190 aa10.83□□□□□ -0.68
RPS6KC1-206ENST00000543354 TRGV4A0A0C4DH28 118 aa10.83□□□□□ -0.68
RPS6KC1-206ENST00000543354 COX6B1P14854 86 aa10.83□□□□□ -0.68
RPS6KC1-206ENST00000543354 DAZ1Q9NQZ3 744 aaKnown RBP10.83□□□□□ -0.68
RPS6KC1-206ENST00000543354 B5MCH6 92 aa10.83□□□□□ -0.68
RPS6KC1-206ENST00000543354 DEFB131AP59861 70 aa10.83□□□□□ -0.68
RPS6KC1-206ENST00000543354 PIP4P2Q8N4L2 257 aa10.83□□□□□ -0.68
RPS6KC1-206ENST00000543354 SLC25A20O43772 301 aa10.82□□□□□ -0.68
RPS6KC1-206ENST00000543354 J3QQQ9 107 aa10.82□□□□□ -0.68
RPS6KC1-206ENST00000543354 MORN3Q6PF18 240 aaPredicted RBP10.82□□□□□ -0.68
RPS6KC1-206ENST00000543354 I3L2K1 104 aa10.82□□□□□ -0.68
RPS6KC1-206ENST00000543354 FAM110DQ8TAY7 271 aaPredicted RBP10.82□□□□□ -0.68
RPS6KC1-206ENST00000543354 PTH2Q96A98 100 aa10.82□□□□□ -0.68
RPS6KC1-206ENST00000543354 SIVA1O15304 175 aa10.81□□□□□ -0.68
RPS6KC1-206ENST00000543354 SPAG8Q99932 426 aaPredicted RBP10.81□□□□□ -0.68
RPS6KC1-206ENST00000543354 PRSS22Q9GZN4 317 aa10.81□□□□□ -0.68
RPS6KC1-206ENST00000543354 EDA2RQ9HAV5 297 aa10.81□□□□□ -0.68
RPS6KC1-206ENST00000543354 TMEM131Q92545 1883 aa10.81□□□□□ -0.68
RPS6KC1-206ENST00000543354 GAGE2AQ6NT46 116 aa10.81□□□□□ -0.68
RPS6KC1-206ENST00000543354 IGKV1D-37A0A075B6S9 117 aa10.8□□□□□ -0.68
RPS6KC1-206ENST00000543354 VWC2LB2RUY7 222 aa10.8□□□□□ -0.68
RPS6KC1-206ENST00000543354 FOXI2Q6ZQN5 318 aa10.8□□□□□ -0.68
RPS6KC1-206ENST00000543354 BOD1L2Q8IYS8 172 aa10.8□□□□□ -0.68
RPS6KC1-206ENST00000543354 XCL2Q9UBD3 114 aa10.8□□□□□ -0.68
RPS6KC1-206ENST00000543354 NDUFA12Q9UI09 145 aa10.79□□□□□ -0.68
RPS6KC1-206ENST00000543354 RBX1P62877 108 aa10.79□□□□□ -0.68
RPS6KC1-206ENST00000543354 ZNF48Q96MX3 618 aaPredicted RBP10.79□□□□□ -0.68
RPS6KC1-206ENST00000543354 CTRLP40313 264 aa10.79□□□□□ -0.68
RPS6KC1-206ENST00000543354 DAZAP2Q15038 168 aaPredicted RBP10.79□□□□□ -0.68
RPS6KC1-206ENST00000543354 H3BMM0 161 aa10.79□□□□□ -0.68
RPS6KC1-206ENST00000543354 CTSGP08311 255 aa10.79□□□□□ -0.68
RPS6KC1-206ENST00000543354 SEM1Q6ZVN7 128 aa10.79□□□□□ -0.68
RPS6KC1-206ENST00000543354 UBE2WQ96B02 151 aa10.79□□□□□ -0.68
RPS6KC1-206ENST00000543354 RBMY1BA6NDE4 496 aaKnown RBP10.78□□□□□ -0.68
RPS6KC1-206ENST00000543354 RBMY1EA6NEQ0 496 aaKnown RBP10.78□□□□□ -0.68
RPS6KC1-206ENST00000543354 CRPP02741 224 aa10.78□□□□□ -0.68
RPS6KC1-206ENST00000543354 RBMY1DP0C7P1 496 aaKnown RBP10.78□□□□□ -0.68
RPS6KC1-206ENST00000543354 RBMY1A1P0DJD3 496 aaKnown RBP10.78□□□□□ -0.68
RPS6KC1-206ENST00000543354 RBMY1CP0DJD4 496 aa10.78□□□□□ -0.68
RPS6KC1-206ENST00000543354 C19orf71A6NCJ1 209 aa10.78□□□□□ -0.68
RPS6KC1-206ENST00000543354 KAAG1Q9UBP8 84 aa10.78□□□□□ -0.68
RPS6KC1-206ENST00000543354 RPL36AP83881 106 aaKnown RBP10.78□□□□□ -0.68
RPS6KC1-206ENST00000543354 RPL36ALQ969Q0 106 aaKnown RBP10.78□□□□□ -0.68
RPS6KC1-206ENST00000543354 A0A1B0GXF2 115 aa10.77□□□□□ -0.68
RPS6KC1-206ENST00000543354 UBE2E1P51965 193 aa10.77□□□□□ -0.68
RPS6KC1-206ENST00000543354 LINC00310P59036 64 aa10.77□□□□□ -0.68
RPS6KC1-206ENST00000543354 SS18L2Q9UHA2 77 aa10.77□□□□□ -0.68
RPS6KC1-206ENST00000543354 RPL39P62891 51 aaKnown RBP10.77□□□□□ -0.69
RPS6KC1-206ENST00000543354 CFHR3Q02985 330 aa10.77□□□□□ -0.69
RPS6KC1-206ENST00000543354 C22orf34Q6ZV56 151 aa10.77□□□□□ -0.69
RPS6KC1-206ENST00000543354 TMEM190Q8WZ59 177 aa10.77□□□□□ -0.69
RPS6KC1-206ENST00000543354 PFN2P35080 140 aa10.77□□□□□ -0.69
RPS6KC1-206ENST00000543354 C3orf56Q8N813 242 aa10.77□□□□□ -0.69
RPS6KC1-206ENST00000543354 PF4P02776 101 aa10.76□□□□□ -0.69
RPS6KC1-206ENST00000543354 TRPT1Q86TN4 253 aaKnown RBP10.76□□□□□ -0.69
RPS6KC1-206ENST00000543354 MBD6Q96DN6 1003 aa10.76□□□□□ -0.69
RPS6KC1-206ENST00000543354 USMG5Q96IX5 58 aa10.76□□□□□ -0.69
RPS6KC1-206ENST00000543354 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
RPS6KC1-206ENST00000543354 PEMTQ9UBM1 199 aa10.76□□□□□ -0.69
RPS6KC1-206ENST00000543354 IGLV2-23P01705 113 aa10.76□□□□□ -0.69
RPS6KC1-206ENST00000543354 RPL35AP18077 110 aaKnown RBP10.76□□□□□ -0.69
RPS6KC1-206ENST00000543354 ODF1Q14990 250 aa10.76□□□□□ -0.69
RPS6KC1-206ENST00000543354 C6orf226Q5I0X4 101 aa10.76□□□□□ -0.69
RPS6KC1-206ENST00000543354 C1QTNF4Q9BXJ3 329 aa10.75□□□□□ -0.69
RPS6KC1-206ENST00000543354 TEX22C9J3V5 150 aa10.75□□□□□ -0.69
RPS6KC1-206ENST00000543354 ZNF80P51504 273 aaPredicted RBP10.75□□□□□ -0.69
RPS6KC1-206ENST00000543354 TAL2Q16559 108 aa10.75□□□□□ -0.69
RPS6KC1-206ENST00000543354 C20orf78Q9BR46 151 aa10.75□□□□□ -0.69
RPS6KC1-206ENST00000543354 SHISA9B4DS77 424 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 MALP21145 153 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 C15orf53Q8NAA6 179 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 A4D1N5 150 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 FAM223BA6NKX1 122 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 CGB3P0DN86 165 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 CGB7P0DN87 165 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 ZNF415Q09FC8 603 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 C9orf153Q5TBE3 101 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 FAM223AQ8IWN6 122 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 EYSQ5T1H1 3165 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 IGHV7-81A0A0B4J1V7 117 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 GAGE12JA6NER3 117 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 GAGE4Q13068 117 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 GAGE5Q13069 117 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 CARD19Q96LW7 228 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 BUB3O43684 328 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 CFC1BP0CG36 223 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 CFC1P0CG37 223 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 GNLYP22749 145 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 SP5Q6BEB4 398 aaPredicted RBP10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 RASL10AQ92737 203 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 MLST8Q9BVC4 326 aa10.74□□□□□ -0.69
RPS6KC1-206ENST00000543354 IGHV1OR15-1A0A075B7D0 117 aa10.73□□□□□ -0.69
RPS6KC1-206ENST00000543354 G3V4G9 280 aa10.73□□□□□ -0.69
RPS6KC1-206ENST00000543354 TMEM86BQ8N661 226 aa10.73□□□□□ -0.69
RPS6KC1-206ENST00000543354 MUC22E2RYF6 1773 aaPredicted RBP10.73□□□□□ -0.69
RPS6KC1-206ENST00000543354 NBEAQ8NFP9 2946 aa10.73□□□□□ -0.69
RPS6KC1-206ENST00000543354 RBAKDNA6NC62 111 aa10.73□□□□□ -0.69
RPS6KC1-206ENST00000543354 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
RPS6KC1-206ENST00000543354 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms