RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 WDR61Q9GZS3 305 aaKnown RBP10.31□□□□□ -0.76
RTN3-211ENST00000542238 CYTL1Q9NRR1 136 aa10.31□□□□□ -0.76
RTN3-211ENST00000542238 TRAV21A0A0B4J279 112 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 TMEM218A2RU14 115 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 FBLL1A6NHQ2 334 aaKnown RBP10.3□□□□□ -0.76
RTN3-211ENST00000542238 H2AFB1P0C5Y9 115 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 TAS2R45P59539 299 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 EIF5AP63241 154 aaKnown RBP10.3□□□□□ -0.76
RTN3-211ENST00000542238 FLI1Q01543 452 aaPredicted RBP10.3□□□□□ -0.76
RTN3-211ENST00000542238 KHDC3LQ587J8 217 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 C10orf91Q5T1B1 145 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 CMTM2Q8TAZ6 248 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 PRADC1Q9BSG0 188 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 TM2D2Q9BX73 214 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 SDF2L1Q9HCN8 221 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 FAM30AQ9NZY2 134 aa10.3□□□□□ -0.76
RTN3-211ENST00000542238 CARHSP1Q9Y2V2 147 aaKnown RBP10.3□□□□□ -0.76
RTN3-211ENST00000542238 TAAR5O14804 337 aa10.29□□□□□ -0.76
RTN3-211ENST00000542238 IGHV3-30P01768 117 aa10.29□□□□□ -0.76
RTN3-211ENST00000542238 IGHV3-33P01772 117 aa10.29□□□□□ -0.76
RTN3-211ENST00000542238 IGHV3-30-3P0DP02 117 aa10.29□□□□□ -0.76
RTN3-211ENST00000542238 IGHV3-30-5P0DP03 117 aa10.29□□□□□ -0.76
RTN3-211ENST00000542238 SVBPQ8N300 66 aa10.29□□□□□ -0.76
RTN3-211ENST00000542238 KCNS1Q96KK3 526 aa10.29□□□□□ -0.76
RTN3-211ENST00000542238 RPH3ALQ9UNE2 315 aa10.29□□□□□ -0.76
RTN3-211ENST00000542238 CIDEAO60543 219 aa10.28□□□□□ -0.76
RTN3-211ENST00000542238 TYMSP04818 313 aa10.28□□□□□ -0.76
RTN3-211ENST00000542238 LAGE3Q14657 143 aa10.28□□□□□ -0.76
RTN3-211ENST00000542238 RHOHQ15669 191 aa10.28□□□□□ -0.76
RTN3-211ENST00000542238 LELP1Q5T871 98 aa10.28□□□□□ -0.76
RTN3-211ENST00000542238 SLC25A29Q8N8R3 303 aa10.28□□□□□ -0.76
RTN3-211ENST00000542238 OTORQ9NRC9 128 aa10.28□□□□□ -0.76
RTN3-211ENST00000542238 TRBV6-4A0A1B0GX49 114 aa10.27□□□□□ -0.77
RTN3-211ENST00000542238 PGPA6NDG6 321 aa10.27□□□□□ -0.77
RTN3-211ENST00000542238 FAM74A7A6NL05 159 aa10.27□□□□□ -0.77
RTN3-211ENST00000542238 ZNF876PQ49A33 203 aa10.27□□□□□ -0.77
RTN3-211ENST00000542238 FAM74A3Q4VXF1 159 aa10.27□□□□□ -0.77
RTN3-211ENST00000542238 FFAR4Q5NUL3 377 aa10.27□□□□□ -0.77
RTN3-211ENST00000542238 TREM1Q9NP99 234 aa10.27□□□□□ -0.77
RTN3-211ENST00000542238 KRTAP29-1A8MX34 341 aaPredicted RBP10.26□□□□□ -0.77
RTN3-211ENST00000542238 F6UZH7 168 aa10.26□□□□□ -0.77
RTN3-211ENST00000542238 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
RTN3-211ENST00000542238 GOLT1AQ6ZVE7 132 aa10.26□□□□□ -0.77
RTN3-211ENST00000542238 LINC00528Q8N1L1 170 aa10.26□□□□□ -0.77
RTN3-211ENST00000542238 DEFB104AQ8WTQ1 72 aa10.26□□□□□ -0.77
RTN3-211ENST00000542238 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
RTN3-211ENST00000542238 SH3BGRL3Q9H299 93 aa10.26□□□□□ -0.77
RTN3-211ENST00000542238 RS1O15537 224 aa10.25□□□□□ -0.77
RTN3-211ENST00000542238 ADCYAP1P18509 176 aa10.25□□□□□ -0.77
RTN3-211ENST00000542238 CFAP126Q5VTH2 177 aa10.25□□□□□ -0.77
RTN3-211ENST00000542238 ARL6IP6Q8N6S5 226 aa10.25□□□□□ -0.77
RTN3-211ENST00000542238 ATP6V0E2Q8NHE4 81 aa10.25□□□□□ -0.77
RTN3-211ENST00000542238 SCGB1C1Q8TD33 95 aa10.25□□□□□ -0.77
RTN3-211ENST00000542238 SEC11CQ9BY50 192 aa10.25□□□□□ -0.77
RTN3-211ENST00000542238 IGHV3-73A0A0B4J1V6 119 aa10.24□□□□□ -0.77
RTN3-211ENST00000542238 SNAPINO95295 136 aa10.24□□□□□ -0.77
RTN3-211ENST00000542238 BLOC1S1P78537 153 aa10.24□□□□□ -0.77
RTN3-211ENST00000542238 Q6ZSA8 131 aa10.24□□□□□ -0.77
RTN3-211ENST00000542238 NDFIP1Q9BT67 221 aa10.24□□□□□ -0.77
RTN3-211ENST00000542238 TRAV8-3A0A0A6YYJ7 113 aa10.23□□□□□ -0.77
RTN3-211ENST00000542238 TRAV8-1A0A0A6YYK1 113 aa10.23□□□□□ -0.77
RTN3-211ENST00000542238 MGST1P10620 155 aaKnown RBP10.23□□□□□ -0.77
RTN3-211ENST00000542238 SULT1A2P50226 295 aa10.23□□□□□ -0.77
RTN3-211ENST00000542238 TVP23CQ96ET8 276 aa10.23□□□□□ -0.77
RTN3-211ENST00000542238 PSMG3Q9BT73 122 aaPredicted RBP10.23□□□□□ -0.77
RTN3-211ENST00000542238 BORCS7-ASMTA0A0B4J1R7 106 aa10.22□□□□□ -0.77
RTN3-211ENST00000542238 A0A1W2PPV4 95 aa10.22□□□□□ -0.77
RTN3-211ENST00000542238 F8W036 122 aa10.22□□□□□ -0.77
RTN3-211ENST00000542238 PQLC2Q6ZP29 291 aa10.22□□□□□ -0.77
RTN3-211ENST00000542238 OR2G3Q8NGZ4 309 aa10.22□□□□□ -0.77
RTN3-211ENST00000542238 WFDC1Q9HC57 220 aa10.22□□□□□ -0.77
RTN3-211ENST00000542238 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.21□□□□□ -0.77
RTN3-211ENST00000542238 LECT2O14960 151 aa10.21□□□□□ -0.77
RTN3-211ENST00000542238 SERF2P84101 59 aa10.21□□□□□ -0.77
RTN3-211ENST00000542238 WFDC2Q14508 124 aa10.21□□□□□ -0.77
RTN3-211ENST00000542238 SERTAD4-AS1Q5TG53 156 aa10.21□□□□□ -0.77
RTN3-211ENST00000542238 DPPA3Q6W0C5 159 aa10.21□□□□□ -0.77
RTN3-211ENST00000542238 SYT8Q8NBV8 401 aa10.21□□□□□ -0.77
RTN3-211ENST00000542238 COX11Q9Y6N1 276 aa10.21□□□□□ -0.77
RTN3-211ENST00000542238 SERTM2A0A1B0GWG4 89 aa10.2□□□□□ -0.78
RTN3-211ENST00000542238 EIF3GO75821 320 aaKnown RBP eCLIP10.2□□□□□ -0.781e-11■■■□□ 15.7
RTN3-211ENST00000542238 GNG5P63218 68 aa10.2□□□□□ -0.78
RTN3-211ENST00000542238 ACOT6Q3I5F7 207 aaPredicted RBP10.2□□□□□ -0.78
RTN3-211ENST00000542238 LINC00518Q8N0U6 118 aa10.2□□□□□ -0.78
RTN3-211ENST00000542238 PTH2Q96A98 100 aa10.2□□□□□ -0.78
RTN3-211ENST00000542238 GGTLC3B5MD39 225 aa10.19□□□□□ -0.78
RTN3-211ENST00000542238 K7EQM0 130 aa10.19□□□□□ -0.78
RTN3-211ENST00000542238 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
RTN3-211ENST00000542238 RPL7L1Q6DKI1 246 aaKnown RBP10.19□□□□□ -0.78
RTN3-211ENST00000542238 LYPD6BQ8NI32 183 aa10.19□□□□□ -0.78
RTN3-211ENST00000542238 SGK494Q96LW2 274 aa10.19□□□□□ -0.78
RTN3-211ENST00000542238 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
RTN3-211ENST00000542238 SMIM3Q9BZL3 60 aa10.19□□□□□ -0.78
RTN3-211ENST00000542238 PGPEP1LA6NFU8 196 aa10.18□□□□□ -0.78
RTN3-211ENST00000542238 GCGP01275 180 aa10.18□□□□□ -0.78
RTN3-211ENST00000542238 SRSF3P84103 164 aaKnown RBP10.18□□□□□ -0.78
RTN3-211ENST00000542238 DAZ4Q86SG3 579 aaKnown RBP10.18□□□□□ -0.78
RTN3-211ENST00000542238 Q8N3U1 123 aa10.18□□□□□ -0.78
RTN3-211ENST00000542238 RMI2Q96E14 147 aa10.18□□□□□ -0.78
RTN3-211ENST00000542238 DAZ3Q9NR90 486 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms