RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 DOPEY1Q5JWR5 2465 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 IGFL3Q6UXB1 125 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 Q8N9W7 124 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 MPLKIPQ8TAP9 179 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 LYPD3O95274 346 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 SRSF8Q9BRL6 282 aaKnown RBP4.93□□□□□ -1.62
DMD-228ENST00000541735 FREM1Q5H8C1 2179 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 MYCNOSP40205 109 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 RPL39LQ96EH5 51 aaKnown RBP4.93□□□□□ -1.62
DMD-228ENST00000541735 RITA1Q96K30 269 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 PYGO2Q9BRQ0 406 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 MYLKQ15746 1914 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 LINC01549A6NIU2 74 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 IGHG2P01859 326 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 NREPQ16612 68 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 NHLRC3Q5JS37 347 aa4.93□□□□□ -1.62
DMD-228ENST00000541735 C2orf70A6NJV1 201 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 OXLD1Q5BKU9 147 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 SHISA2Q6UWI4 295 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 PLA2G2EQ9NZK7 142 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 ORMDL1Q9P0S3 153 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 GREB1LQ9C091 1923 aaPredicted RBP4.92□□□□□ -1.62
DMD-228ENST00000541735 SPG11Q96JI7 2443 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 NUPR2A6NF83 97 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 PIP4P1Q86T03 277 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 PNRC2Q9NPJ4 139 aaKnown RBP4.92□□□□□ -1.62
DMD-228ENST00000541735 CTSZQ9UBR2 303 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 FBLN5Q9UBX5 448 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 TRBV19A0A075B6N1 114 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 LYPD1Q8N2G4 141 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 RBBP6Q7Z6E9 1792 aaKnown RBP4.92□□□□□ -1.62
DMD-228ENST00000541735 UTF1Q5T230 341 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 ZNF833PQ6ZTB9 187 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 TSC2P49815 1807 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 LRRC37AA6NMS7 1700 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 WDR90Q96KV7 1748 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 TRAV9-1A0A075B6T8 112 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 IGKV3D-7A0A0C4DH55 119 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 K7ERJ3 54 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 KIR2DL5BQ8NHK3 375 aa4.92□□□□□ -1.62
DMD-228ENST00000541735 LINC00269Q8N2A0 174 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 PTPRDP23468 1912 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 FRMPD3Q5JV73 1810 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 CCL25O15444 150 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 VOPP1Q96AW1 172 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 CYYR1Q96J86 154 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 RNF222A6NCQ9 220 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 H0YIZ8 118 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 TRBV12-3P01733 135 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 MP68P56378 58 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 YPEL3P61236 119 aaPredicted RBP4.91□□□□□ -1.62
DMD-228ENST00000541735 NMSQ5H8A3 153 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 FAM222AQ5U5X8 452 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 WFDC10BQ8IUB3 73 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 NDUFA4L2Q9NRX3 87 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 SYS1-DBNDD2H3BUS1 97 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 IGHV2-70P01814 119 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 CXCL1P09341 107 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 C14orf177Q52M58 125 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 FSHBP01225 129 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 BAALC-AS2P0C853 105 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 C4orf3Q8WVX3 66 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 TMEM190Q8WZ59 177 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 U3KQA8 63 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 Q6ZRM9 215 aa4.91□□□□□ -1.62
DMD-228ENST00000541735 KIAA1671Q9BY89 1806 aa4.9□□□□□ -1.62
DMD-228ENST00000541735 H3BRN7 92 aa4.9□□□□□ -1.62
DMD-228ENST00000541735 WT1-ASQ06250 92 aa4.9□□□□□ -1.62
DMD-228ENST00000541735 COL4A1P02462 1669 aa4.9□□□□□ -1.62
DMD-228ENST00000541735 BDP1A6H8Y1 2624 aa4.9□□□□□ -1.62
DMD-228ENST00000541735 SND1-IT1Q9HBX3 110 aa4.9□□□□□ -1.62
DMD-228ENST00000541735 ZNF492Q9P255 531 aa4.9□□□□□ -1.62
DMD-228ENST00000541735 ZFP2Q6ZN57 461 aa4.9□□□□□ -1.63
DMD-228ENST00000541735 Q8N8P6 123 aa4.9□□□□□ -1.63
DMD-228ENST00000541735 OPRPNQ99935 248 aaPredicted RBP4.9□□□□□ -1.63
DMD-228ENST00000541735 MRPL35Q9NZE8 188 aaKnown RBP4.9□□□□□ -1.63
DMD-228ENST00000541735 ANK1P16157 1881 aa4.9□□□□□ -1.63
DMD-228ENST00000541735 NYNRINQ9P2P1 1898 aaKnown RBP4.9□□□□□ -1.63
DMD-228ENST00000541735 HELZP42694 1942 aaKnown RBP4.9□□□□□ -1.63
DMD-228ENST00000541735 NANOS2P60321 138 aaKnown RBP4.9□□□□□ -1.63
DMD-228ENST00000541735 PDE6HQ13956 83 aa4.9□□□□□ -1.63
DMD-228ENST00000541735 ANKRD29Q8N6D5 301 aa4.9□□□□□ -1.63
DMD-228ENST00000541735 ATRAIDQ6UW56 229 aa4.9□□□□□ -1.63
DMD-228ENST00000541735 NDUFA11Q86Y39 141 aa4.9□□□□□ -1.63
DMD-228ENST00000541735 LINC00526Q96FQ7 95 aa4.9□□□□□ -1.63
DMD-228ENST00000541735 SLX1AQ9BQ83 275 aa4.9□□□□□ -1.63
DMD-228ENST00000541735 IGKV2D-26A0A0A0MRZ7 120 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 PRSS46E5RG02 174 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 NPYP01303 97 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 Q8N1Y9 231 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 J3QQQ9 107 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 PLA2G1BP04054 148 aaKnown RBP4.89□□□□□ -1.63
DMD-228ENST00000541735 SH2D6Q7Z4S9 175 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 TNRC6BQ9UPQ9 1833 aaKnown RBP4.89□□□□□ -1.63
DMD-228ENST00000541735 RBAKDNA6NC62 111 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 C3orf79P0CE67 100 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 DCANP1Q8TF63 244 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 TEX49A0A1B0GTD5 131 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 P0DMU3 169 aa4.89□□□□□ -1.63
DMD-228ENST00000541735 FAM231AP0DMU4 169 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms