RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 R4GMQ9 66 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 ABCA1O95477 2261 aa3.87□□□□□ -1.79
DDB1-219ENST00000541513 CSPG4Q6UVK1 2322 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 IGHV3OR15-7A0A075B7D8 119 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 IGHV7-4-1A0A0J9YVY3 117 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 TRBV7-6A0A0J9YX20 115 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 OR2T8A6NH00 312 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 IQCF6A8MYZ5 107 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 SRRM5B3KS81 715 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 COX7A2LO14548 114 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 GEMIN2O14893 280 aaKnown RBP3.86□□□□□ -1.79
DDB1-219ENST00000541513 TAX1BP3O14907 124 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST1H2BKO60814 126 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HRASP01112 189 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 IGLV3-1P01715 115 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST1H2BJP06899 126 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST1H2BOP23527 126 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST1H2BBP33778 126 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 SRP14P37108 136 aaKnown RBP3.86□□□□□ -1.79
DDB1-219ENST00000541513 MPV17P39210 176 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 NMUP48645 174 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST1H2BDP58876 126 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 NANOS2P60321 138 aaKnown RBP3.86□□□□□ -1.79
DDB1-219ENST00000541513 FGF12P61328 243 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST1H2BCP62807 126 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 ATP5G2Q06055 141 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST2H2BEQ16778 126 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.86□□□□□ -1.79
DDB1-219ENST00000541513 SLC25A26Q70HW3 274 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 PDPNQ86YL7 162 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 ATOH7Q8N100 152 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 ZNF525Q8N782 197 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 KLHL30-AS1Q8NEE0 82 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST1H2BHQ93079 126 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 TOMM6Q96B49 74 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 DPH3Q96FX2 82 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 LYZL4Q96KX0 146 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 CCL19Q99731 98 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST1H2BNQ99877 126 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIST1H2BMQ99879 126 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 OPRPNQ99935 248 aaPredicted RBP3.86□□□□□ -1.79
DDB1-219ENST00000541513 TTTY10Q9BZA0 68 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 TMEM106BQ9NUM4 274 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 CSMD2Q7Z408 3487 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 CR1P17927 2039 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 HIVEP1P15822 2718 aa3.86□□□□□ -1.79
DDB1-219ENST00000541513 F8P00451 2351 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 ABCA2Q9BZC7 2435 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 MALRD1Q5VYJ5 2156 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 J3QLW9 94 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 UQCRQO14949 82 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 NAPSAO96009 420 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 IGLV2-11P01706 119 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 MT-ND6P03923 174 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 IGHV1-8P0DP01 117 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 LYZP61626 148 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 ZNF90Q03938 601 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 Q0VG73 95 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 DIAPH2-AS1Q14236 149 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 AADACL3Q5VUY0 350 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 OR2T2Q6IF00 324 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 ZNF880Q6PDB4 577 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 C10orf126Q8N4M7 172 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 Q8N7P7 452 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 OR4X2Q8NGF9 303 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 ATP6V0E2Q8NHE4 81 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 LINC00526Q96FQ7 95 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 ZNF414Q96IQ9 312 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 AQP10Q96PS8 301 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 C11orf68Q9H3H3 251 aaKnown RBP3.85□□□□□ -1.79
DDB1-219ENST00000541513 NAA60Q9H7X0 242 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 C8orf17Q9NRJ1 99 aa3.85□□□□□ -1.79
DDB1-219ENST00000541513 DSCAML1Q8TD84 2053 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 VPS13CQ709C8 3753 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 TRBV20OR9-2A0A075B6H5 130 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 A0A1B0GW54 56 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 ODAMA1E959 279 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 BPY2O14599 106 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 CYB5AP00167 134 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 TRGC2P03986 189 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 CD7P09564 240 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 P0C879 139 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 ADCYAP1P18509 176 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 SDC2P34741 201 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 NANOS3P60323 173 aaKnown RBP3.84□□□□□ -1.79
DDB1-219ENST00000541513 YPEL3P61236 119 aaPredicted RBP3.84□□□□□ -1.79
DDB1-219ENST00000541513 CDK5R1Q15078 307 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 Q1RN00 199 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 DEFB113Q30KQ7 82 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
DDB1-219ENST00000541513 C9orf153Q5TBE3 101 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 Q6ZR03 302 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 GPHB5Q86YW7 130 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 OR2T10Q8NGZ9 312 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 OR4A5Q8NH83 315 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 C1orf147Q96MC9 270 aaPredicted RBP3.84□□□□□ -1.79
DDB1-219ENST00000541513 CHCHD7Q9BUK0 85 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 DYNLRB1Q9NP97 96 aa3.84□□□□□ -1.79
DDB1-219ENST00000541513 LSM2Q9Y333 95 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms