RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PDE6DO43924 150 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 BCL2P10415 239 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 CRYBA4P53673 196 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 FAM3BP58499 235 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-215ENST00000540904 ZNF506Q5JVG8 444 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 PRR27Q6MZM9 219 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 C11orf52Q96A22 123 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 TXNDC17Q9BRA2 123 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 VAX2Q9UIW0 290 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 LINC00588Q9Y4M8 146 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 ICOSQ9Y6W8 199 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 PLECQ15149 4684 aaKnown RBP6.41□□□□□ -1.38
SNHG1-215ENST00000540904 RYR2Q92736 4967 aa6.41□□□□□ -1.38
SNHG1-215ENST00000540904 H3BVH4 76 aa6.4□□□□□ -1.38
SNHG1-215ENST00000540904 BLOC1S1P78537 153 aa6.4□□□□□ -1.38
SNHG1-215ENST00000540904 ESRGQ1W209 222 aa6.4□□□□□ -1.38
SNHG1-215ENST00000540904 CENPWQ5EE01 88 aa6.4□□□□□ -1.38
SNHG1-215ENST00000540904 MLST8Q9BVC4 326 aa6.4□□□□□ -1.38
SNHG1-215ENST00000540904 IL36BQ9NZH7 164 aa6.4□□□□□ -1.38
SNHG1-215ENST00000540904 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.39
SNHG1-215ENST00000540904 ALMS1Q8TCU4 4167 aa6.4□□□□□ -1.39
SNHG1-215ENST00000540904 IGHV3-73A0A0B4J1V6 119 aa6.39□□□□□ -1.39
SNHG1-215ENST00000540904 ARMS2P0C7Q2 107 aa6.39□□□□□ -1.39
SNHG1-215ENST00000540904 GYPEP15421 78 aa6.39□□□□□ -1.39
SNHG1-215ENST00000540904 TAGLN2P37802 199 aaKnown RBP6.39□□□□□ -1.39
SNHG1-215ENST00000540904 GNG4P50150 75 aa6.39□□□□□ -1.39
SNHG1-215ENST00000540904 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
SNHG1-215ENST00000540904 ZNF575Q86XF7 245 aa6.39□□□□□ -1.39
SNHG1-215ENST00000540904 ZNRF2Q8NHG8 242 aa6.39□□□□□ -1.39
SNHG1-215ENST00000540904 PCNPQ8WW12 178 aaKnown RBP6.39□□□□□ -1.39
SNHG1-215ENST00000540904 PTH2Q96A98 100 aa6.39□□□□□ -1.39
SNHG1-215ENST00000540904 MED9Q9NWA0 146 aa6.39□□□□□ -1.39
SNHG1-215ENST00000540904 HYDINQ4G0P3 5121 aa6.38□□□□□ -1.39
SNHG1-215ENST00000540904 RAB19A4D1S5 217 aa6.38□□□□□ -1.39
SNHG1-215ENST00000540904 K7EQD1 137 aa6.38□□□□□ -1.39
SNHG1-215ENST00000540904 M0R381 172 aa6.38□□□□□ -1.39
SNHG1-215ENST00000540904 RS1O15537 224 aa6.38□□□□□ -1.39
SNHG1-215ENST00000540904 MGST1P10620 155 aaKnown RBP6.38□□□□□ -1.39
SNHG1-215ENST00000540904 GATA1P15976 413 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-215ENST00000540904 RPL19P84098 196 aaKnown RBP6.38□□□□□ -1.39
SNHG1-215ENST00000540904 MRPL23Q16540 153 aaKnown RBP6.38□□□□□ -1.39
SNHG1-215ENST00000540904 DNLZQ5SXM8 178 aa6.38□□□□□ -1.39
SNHG1-215ENST00000540904 SYT8Q8NBV8 401 aa6.38□□□□□ -1.39
SNHG1-215ENST00000540904 PHLDA3Q9Y5J5 127 aa6.38□□□□□ -1.39
SNHG1-215ENST00000540904 MUC4Q99102 2169 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 TRBV20OR9-2A0A075B6H5 130 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 LOC100131303A0A0U1RQF7 123 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 RBFOX3A6NFN3 312 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 A8MWV9 139 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 SRIP30626 198 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 PIK3CD-AS1Q5SR53 167 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 Q6ZR54 194 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 NEGR1Q7Z3B1 354 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 Q8N3U1 123 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 SLC25A29Q8N8R3 303 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 LYPD6BQ8NI32 183 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 DAZAP1Q96EP5 407 aaKnown RBP6.37□□□□□ -1.39
SNHG1-215ENST00000540904 Q9H8V8 135 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 JPT2Q9H910 190 aa6.37□□□□□ -1.39
SNHG1-215ENST00000540904 MRPS16Q9Y3D3 137 aaKnown RBP6.37□□□□□ -1.39
SNHG1-215ENST00000540904 NBDYA0A0U1RRE5 68 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 TRBV6-4A0A1B0GX49 114 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 CIDEAO60543 219 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 IGLV2-8P01709 118 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 LYPD5Q6UWN5 251 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 ZFP82Q8N141 532 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 SMIM12Q96EX1 92 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 PRADC1Q9BSG0 188 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 SAMD10Q9BYL1 202 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 PARLQ9H300 379 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 SCRT2Q9NQ03 307 aa6.36□□□□□ -1.39
SNHG1-215ENST00000540904 A0A087WWL8 130 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 CXCL1P09341 107 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 CEBPGP53567 150 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 SSTP61278 116 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 RHOHQ15669 191 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 TOR2AQ5JU69 321 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 FAM74A4Q5TZK3 123 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 ZFP2Q6ZN57 461 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 Q6ZSN1 163 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 EIF5A2Q9GZV4 153 aaKnown RBP6.35□□□□□ -1.39
SNHG1-215ENST00000540904 DNAH1Q9P2D7 4330 aa6.35□□□□□ -1.39
SNHG1-215ENST00000540904 MUC21A0A0G2JKD1 596 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 MUC21A0A140T8X8 626 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 C19orf71A6NCJ1 209 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 TMEM250H0YL14 139 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 RHODO00212 210 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 RTL8CO15255 209 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 NXPH4O95158 308 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 P01737 135 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 MED14OSP0DP75 135 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 GZMBP10144 247 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 C1orf134Q5TEV5 83 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 TEX261Q6UWH6 196 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 SH2D6Q7Z4S9 175 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 OR2D3Q8NGH3 330 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 OR10AG1Q8NH19 301 aa6.34□□□□□ -1.39
SNHG1-215ENST00000540904 SFRP2Q96HF1 295 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms