RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 PTPRDP23468 1912 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 ALPK3Q96L96 1907 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 MYO18AQ92614 2054 aaKnown RBP0.44□□□□□ -2.34
MDM2-227ENST00000540709 E9PCH4 1651 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 ERCC6Q03468 1493 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 TRAV2A0A0B4J234 112 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 FAM92AA1XBS5 289 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 ZNF670-ZNF695F2Z2N8 137 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 NDUFA2O43678 99 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 NCR2O95944 276 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 TSPAN19P0C672 248 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 PIPP12273 146 aaPredicted RBP0.44□□□□□ -2.34
MDM2-227ENST00000540709 HIST1H1DP16402 221 aaKnown RBP0.44□□□□□ -2.34
MDM2-227ENST00000540709 SELENOWP63302 87 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 FXYD3Q14802 87 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 SPCS2Q15005 226 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 S100A7L2Q5SY68 101 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 SPANXN1Q5VSR9 72 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 CYP2G1PQ6ZSU1 146 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 Q6ZUT4 128 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 PLAC4Q8WY50 150 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 SPTSSAQ969W0 71 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 IFI27L1Q96BM0 104 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 PDCD10Q9BUL8 212 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 RPRMQ9NS64 109 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 TMEM242Q9NWH2 141 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 CCDC167Q9P0B6 97 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 NDUFA12Q9UI09 145 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 TECTAO75443 2155 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 MYH1P12882 1939 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 KDM5CP41229 1560 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 CEP152O94986 1710 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 CDK5RAP2Q96SN8 1893 aa0.44□□□□□ -2.34
MDM2-227ENST00000540709 USP54Q70EL1 1684 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 MCM3APO60318 1980 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 HELZP42694 1942 aaKnown RBP0.43□□□□□ -2.34
MDM2-227ENST00000540709 CCDC179H3BU77 68 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 FXYD6P3P58550 94 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 UBE2G1P62253 170 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 C6orf52Q5T4I8 152 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 LINC01545Q5VT33 79 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 OR2T2Q6IF00 324 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 RPL13AP3Q6NVV1 102 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 SCIMPQ6UWF3 145 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 C5orf56Q8N8D9 126 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 SPTSSBQ8NFR3 76 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 VSTM2AQ8TAG5 236 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 TSKUQ8WUA8 353 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 COPS9Q8WXC6 57 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 SEC11CQ9BY50 192 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 TMEM191AQ9H0A3 160 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.43□□□□□ -2.34
MDM2-227ENST00000540709 ANK1P16157 1881 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 TRPM7Q96QT4 1865 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 CACNA1BQ00975 2339 aa0.43□□□□□ -2.34
MDM2-227ENST00000540709 ZCCHC6Q5VYS8 1495 aaKnown RBP0.42□□□□□ -2.34
MDM2-227ENST00000540709 MED12Q93074 2177 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 PEAK1Q9H792 1746 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 TRAV12-2A0A075B6T6 113 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 TRAV12-3A0A0B4J271 114 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 PIGBOS1A0A0B4J2F0 54 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 NBDYA0A0U1RRE5 68 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 TEX49A0A1B0GTD5 131 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 CXorf51AA0A1B0GTR3 108 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 NDUFB6O95139 128 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 LY6G6CO95867 125 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 ZNF137PP52743 207 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 EMX2Q04743 252 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 C9orf116Q5BN46 136 aaPredicted RBP0.42□□□□□ -2.34
MDM2-227ENST00000540709 SPINK9Q5DT21 86 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 MEIG1Q5JSS6 88 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 FAM74A4Q5TZK3 123 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 C4orf33Q8N1A6 199 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 DPH3Q96FX2 82 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 DSCR8Q96T75 97 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 SDF2Q99470 211 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 LINC00470Q9BZP3 86 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 BET1LQ9NYM9 111 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 NINQ8N4C6 2090 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 KIDINS220Q9ULH0 1771 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 LRP5O75197 1615 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 PHRF1Q9P1Y6 1649 aaKnown RBP0.42□□□□□ -2.34
MDM2-227ENST00000540709 FANCMQ8IYD8 2048 aa0.42□□□□□ -2.34
MDM2-227ENST00000540709 UHRF1BP1LA0JNW5 1464 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 TET1Q8NFU7 2136 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 KIAA1549LQ6ZVL6 1849 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 PTPRGP23470 1445 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 PRG4Q92954 1404 aaPredicted RBP0.41□□□□□ -2.34
MDM2-227ENST00000540709 RBAKDNA6NC62 111 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 EFCAB10A6NFE3 127 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 K7EP13 123 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 SNAPC5O75971 98 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 IFNA17P01571 189 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 SMIM6P0DI80 62 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 CBLN1P23435 193 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 ELOF1P60002 83 aaKnown RBP0.41□□□□□ -2.34
MDM2-227ENST00000540709 RBM3P98179 157 aaKnown RBP0.41□□□□□ -2.34
MDM2-227ENST00000540709 SSBP1Q04837 148 aaKnown RBP0.41□□□□□ -2.34
MDM2-227ENST00000540709 KLKP1Q107X0 134 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 SPINK13Q1W4C9 94 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms