RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 GNG13Q9P2W3 67 aa10.37□□□□□ -0.75
UBE3B-212ENST00000540230 A0A1B0GVY2 172 aa10.36□□□□□ -0.75
UBE3B-212ENST00000540230 B4DEV8 164 aa10.36□□□□□ -0.75
UBE3B-212ENST00000540230 KRBOX1C9JBD0 128 aa10.36□□□□□ -0.75
UBE3B-212ENST00000540230 K7EQD1 137 aa10.36□□□□□ -0.75
UBE3B-212ENST00000540230 ORM1P02763 201 aa10.36□□□□□ -0.75
UBE3B-212ENST00000540230 RAB5CP51148 216 aa10.36□□□□□ -0.75
UBE3B-212ENST00000540230 ZNF674Q2M3X9 581 aa10.36□□□□□ -0.75
UBE3B-212ENST00000540230 CFAP126Q5VTH2 177 aa10.36□□□□□ -0.75
UBE3B-212ENST00000540230 IGHV3-73A0A0B4J1V6 119 aa10.35□□□□□ -0.75
UBE3B-212ENST00000540230 TRAV1-1A0A0B4J248 108 aa10.35□□□□□ -0.75
UBE3B-212ENST00000540230 GRIFINA4D1Z8 144 aa10.35□□□□□ -0.75
UBE3B-212ENST00000540230 PRSS29PA6NIE9 313 aa10.35□□□□□ -0.75
UBE3B-212ENST00000540230 RS1O15537 224 aa10.35□□□□□ -0.75
UBE3B-212ENST00000540230 GYPEP15421 78 aa10.35□□□□□ -0.75
UBE3B-212ENST00000540230 GATA1P15976 413 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-212ENST00000540230 MRPL23Q16540 153 aaKnown RBP10.35□□□□□ -0.75
UBE3B-212ENST00000540230 FAM162BQ5T6X4 162 aa10.35□□□□□ -0.75
UBE3B-212ENST00000540230 C1orf134Q5TEV5 83 aa10.35□□□□□ -0.75
UBE3B-212ENST00000540230 EIF5AL1Q6IS14 154 aaKnown RBP10.35□□□□□ -0.75
UBE3B-212ENST00000540230 TMSB15BA0A087X1C1 80 aa10.34□□□□□ -0.75
UBE3B-212ENST00000540230 H3BVH4 76 aa10.34□□□□□ -0.75
UBE3B-212ENST00000540230 S100A4P26447 101 aaKnown RBP10.34□□□□□ -0.75
UBE3B-212ENST00000540230 ASIPP42127 132 aa10.34□□□□□ -0.75
UBE3B-212ENST00000540230 DERL1Q9BUN8 251 aa10.34□□□□□ -0.75
UBE3B-212ENST00000540230 MANBALQ9NQG1 85 aa10.34□□□□□ -0.75
UBE3B-212ENST00000540230 LYPD5Q6UWN5 251 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 PTH2Q96A98 100 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 MLST8Q9BVC4 326 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 JPT2Q9H910 190 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 IL36BQ9NZH7 164 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 ARMS2P0C7Q2 107 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 SRIP30626 198 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 NKX2-5P52952 324 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-212ENST00000540230 LINC01559Q495D7 138 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 DNLZQ5SXM8 178 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 NEGR1Q7Z3B1 354 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 SLC25A29Q8N8R3 303 aa10.33□□□□□ -0.76
UBE3B-212ENST00000540230 NXPH4O95158 308 aa10.32□□□□□ -0.76
UBE3B-212ENST00000540230 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
UBE3B-212ENST00000540230 RPL19P84098 196 aaKnown RBP10.32□□□□□ -0.76
UBE3B-212ENST00000540230 DMRTA1Q5VZB9 504 aa10.32□□□□□ -0.76
UBE3B-212ENST00000540230 BAGE2Q86Y30 109 aa10.32□□□□□ -0.76
UBE3B-212ENST00000540230 C6orf223Q8N319 242 aa10.32□□□□□ -0.76
UBE3B-212ENST00000540230 PCNPQ8WW12 178 aaKnown RBP10.32□□□□□ -0.76
UBE3B-212ENST00000540230 C11orf52Q96A22 123 aa10.32□□□□□ -0.76
UBE3B-212ENST00000540230 S100A9P06702 114 aaKnown RBP10.31□□□□□ -0.76
UBE3B-212ENST00000540230 Q6ZSN1 163 aa10.31□□□□□ -0.76
UBE3B-212ENST00000540230 SAMD10Q9BYL1 202 aa10.31□□□□□ -0.76
UBE3B-212ENST00000540230 PARLQ9H300 379 aa10.31□□□□□ -0.76
UBE3B-212ENST00000540230 TNP2Q05952 138 aa10.3□□□□□ -0.76
UBE3B-212ENST00000540230 SOHLH1Q5JUK2 328 aa10.3□□□□□ -0.76
UBE3B-212ENST00000540230 ALKAL2Q6UX46 152 aa10.3□□□□□ -0.76
UBE3B-212ENST00000540230 SCRT2Q9NQ03 307 aa10.3□□□□□ -0.76
UBE3B-212ENST00000540230 TEX46H3BTG2 121 aa10.29□□□□□ -0.76
UBE3B-212ENST00000540230 SIVA1O15304 175 aa10.29□□□□□ -0.76
UBE3B-212ENST00000540230 PRR27Q6MZM9 219 aa10.29□□□□□ -0.76
UBE3B-212ENST00000540230 UFSP1Q6NVU6 142 aa10.29□□□□□ -0.76
UBE3B-212ENST00000540230 WFDC10BQ8IUB3 73 aa10.29□□□□□ -0.76
UBE3B-212ENST00000540230 KIAA1109Q2LD37 5005 aa10.29□□□□□ -0.76
UBE3B-212ENST00000540230 TRBV6-4A0A1B0GX49 114 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 IGLV2-8P01709 118 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 BCL2P10415 239 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 MEF2BQ02080 365 aaPredicted RBP10.28□□□□□ -0.76
UBE3B-212ENST00000540230 TTC32Q5I0X7 151 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 PIK3CD-AS1Q5SR53 167 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 TXNDC17Q9BRA2 123 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 Q9UF83 564 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 RAB19A4D1S5 217 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 A8MWV9 139 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 CIDEAO60543 219 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 RHOHQ15669 191 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 CENPWQ5EE01 88 aa10.28□□□□□ -0.76
UBE3B-212ENST00000540230 DNAH5Q8TE73 4624 aa10.27□□□□□ -0.76
UBE3B-212ENST00000540230 HERC2O95714 4834 aa10.27□□□□□ -0.77
UBE3B-212ENST00000540230 TRBV20OR9-2A0A075B6H5 130 aa10.27□□□□□ -0.77
UBE3B-212ENST00000540230 A0A1W2PPQ1 181 aa10.27□□□□□ -0.77
UBE3B-212ENST00000540230 M0R381 172 aa10.27□□□□□ -0.77
UBE3B-212ENST00000540230 MGST1P10620 155 aaKnown RBP10.27□□□□□ -0.77
UBE3B-212ENST00000540230 PHLDA3Q9Y5J5 127 aa10.27□□□□□ -0.77
UBE3B-212ENST00000540230 LRP1BQ9NZR2 4599 aa10.27□□□□□ -0.77
UBE3B-212ENST00000540230 IFNA1P01562 189 aa10.26□□□□□ -0.77
UBE3B-212ENST00000540230 LINC00315P59091 139 aa10.26□□□□□ -0.77
UBE3B-212ENST00000540230 ZFP2Q6ZN57 461 aa10.26□□□□□ -0.77
UBE3B-212ENST00000540230 C14orf178Q8N769 122 aaPredicted RBP10.26□□□□□ -0.77
UBE3B-212ENST00000540230 PRADC1Q9BSG0 188 aa10.26□□□□□ -0.77
UBE3B-212ENST00000540230 A0A087WWL8 130 aa10.25□□□□□ -0.77
UBE3B-212ENST00000540230 FAM74A4Q5TZK3 123 aa10.25□□□□□ -0.77
UBE3B-212ENST00000540230 SYT8Q8NBV8 401 aa10.25□□□□□ -0.77
UBE3B-212ENST00000540230 OR10AG1Q8NH19 301 aa10.25□□□□□ -0.77
UBE3B-212ENST00000540230 MED9Q9NWA0 146 aa10.25□□□□□ -0.77
UBE3B-212ENST00000540230 VAX2Q9UIW0 290 aa10.25□□□□□ -0.77
UBE3B-212ENST00000540230 TNFRSF18Q9Y5U5 241 aa10.25□□□□□ -0.77
UBE3B-212ENST00000540230 MUC21A0A0G2JKD1 596 aa10.24□□□□□ -0.77
UBE3B-212ENST00000540230 MUC21A0A140T8X8 626 aa10.24□□□□□ -0.77
UBE3B-212ENST00000540230 PDE6DO43924 150 aa10.24□□□□□ -0.77
UBE3B-212ENST00000540230 CRYGDP07320 174 aa10.24□□□□□ -0.77
UBE3B-212ENST00000540230 CXCL1P09341 107 aa10.24□□□□□ -0.77
UBE3B-212ENST00000540230 SFRP2Q96HF1 295 aa10.24□□□□□ -0.77
UBE3B-212ENST00000540230 GAGE12JA6NER3 117 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms