RNA–Protein interactions for RNA: ENST00000539953.1

SCNN1A-214, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 401 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-214ENST00000539953 C5orf17Q8NAS9 161 aa8.2□□□□□ -1.1
SCNN1A-214ENST00000539953 PSG8Q9UQ74 426 aa8.2□□□□□ -1.1
SCNN1A-214ENST00000539953 SERTM2A0A1B0GWG4 89 aa8.19□□□□□ -1.1
SCNN1A-214ENST00000539953 GGTLC3B5MD39 225 aa8.19□□□□□ -1.1
SCNN1A-214ENST00000539953 SSNA1O43805 119 aa8.19□□□□□ -1.1
SCNN1A-214ENST00000539953 MGST1P10620 155 aaKnown RBP8.19□□□□□ -1.1
SCNN1A-214ENST00000539953 CDC34P49427 236 aaPredicted RBP8.19□□□□□ -1.1
SCNN1A-214ENST00000539953 UFSP1Q6NVU6 142 aa8.19□□□□□ -1.1
SCNN1A-214ENST00000539953 OR2G3Q8NGZ4 309 aa8.19□□□□□ -1.1
SCNN1A-214ENST00000539953 NDFIP1Q9BT67 221 aa8.19□□□□□ -1.1
SCNN1A-214ENST00000539953 PARLQ9H300 379 aa8.19□□□□□ -1.1
SCNN1A-214ENST00000539953 IGKV3D-20A0A0C4DH25 116 aa8.18□□□□□ -1.1
SCNN1A-214ENST00000539953 GCHFRP30047 84 aa8.18□□□□□ -1.1
SCNN1A-214ENST00000539953 DAZ4Q86SG3 579 aaKnown RBP8.18□□□□□ -1.1
SCNN1A-214ENST00000539953 RAB24Q969Q5 203 aa8.18□□□□□ -1.1
SCNN1A-214ENST00000539953 TM2D2Q9BX73 214 aa8.18□□□□□ -1.1
SCNN1A-214ENST00000539953 DAZ3Q9NR90 486 aaKnown RBP8.18□□□□□ -1.1
SCNN1A-214ENST00000539953 J3QL48 77 aa8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 LECT2O14960 151 aa8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 SUMO1P63165 101 aaKnown RBP8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 FLI1Q01543 452 aaPredicted RBP8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 SMUG1Q53HV7 270 aa8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 ZFP2Q6ZN57 461 aa8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 PRNTQ86SH4 94 aa8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 JPT2Q9H910 190 aa8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 EPDR1Q9UM22 224 aa8.17□□□□□ -1.1
SCNN1A-214ENST00000539953 GAGE12JA6NER3 117 aa8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 KRTAP29-1A8MX34 341 aaPredicted RBP8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 KRTAP10-4P60372 401 aaPredicted RBP8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 LRP1Q07954 4544 aaKnown RBP8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 GAGE1Q13065 139 aa8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 GAGE4Q13068 117 aa8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 GAGE5Q13069 117 aa8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 LINC01620Q4KN68 170 aa8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 GAGE13Q4V321 117 aa8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 C14orf178Q8N769 122 aaPredicted RBP8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 CYB561D1Q8N8Q1 229 aa8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 HSD17B11Q8NBQ5 300 aa8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 DNAJC30Q96LL9 226 aa8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 PSMG3Q9BT73 122 aaPredicted RBP8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 SAMD10Q9BYL1 202 aa8.16□□□□□ -1.1
SCNN1A-214ENST00000539953 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.15□□□□□ -1.1
SCNN1A-214ENST00000539953 TRAV8-3A0A0A6YYJ7 113 aa8.15□□□□□ -1.1
SCNN1A-214ENST00000539953 A8MWV9 139 aa8.15□□□□□ -1.1
SCNN1A-214ENST00000539953 K7EQM0 130 aa8.15□□□□□ -1.1
SCNN1A-214ENST00000539953 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.1
SCNN1A-214ENST00000539953 ATP6V0CP27449 155 aa8.15□□□□□ -1.1
SCNN1A-214ENST00000539953 PIK3CD-AS1Q5SR53 167 aa8.15□□□□□ -1.1
SCNN1A-214ENST00000539953 OR2T35Q8NGX2 323 aa8.15□□□□□ -1.1
SCNN1A-214ENST00000539953 BAALCQ8WXS3 180 aa8.15□□□□□ -1.1
SCNN1A-214ENST00000539953 SH3BGRL3Q9H299 93 aa8.15□□□□□ -1.1
SCNN1A-214ENST00000539953 TRAV34A0A0B4J273 112 aa8.14□□□□□ -1.11
SCNN1A-214ENST00000539953 ZFP69Q49AA0 526 aa8.14□□□□□ -1.11
SCNN1A-214ENST00000539953 SAPCD1Q5SSQ6 148 aa8.14□□□□□ -1.11
SCNN1A-214ENST00000539953 SCXQ7RTU7 201 aa8.14□□□□□ -1.11
SCNN1A-214ENST00000539953 ARL2-SNX15V9GYD0 113 aa8.14□□□□□ -1.11
SCNN1A-214ENST00000539953 PKHD1L1Q86WI1 4243 aa8.14□□□□□ -1.11
SCNN1A-214ENST00000539953 A6NHS1 94 aa8.13□□□□□ -1.11
SCNN1A-214ENST00000539953 CXorf1O96002 111 aa8.13□□□□□ -1.11
SCNN1A-214ENST00000539953 SERF2P84101 59 aa8.13□□□□□ -1.11
SCNN1A-214ENST00000539953 LGALSLQ3ZCW2 172 aaPredicted RBP8.13□□□□□ -1.11
SCNN1A-214ENST00000539953 DMRTA1Q5VZB9 504 aa8.13□□□□□ -1.11
SCNN1A-214ENST00000539953 AQP10Q96PS8 301 aa8.13□□□□□ -1.11
SCNN1A-214ENST00000539953 TMEM167BQ9NRX6 74 aa8.13□□□□□ -1.11
SCNN1A-214ENST00000539953 IL36BQ9NZH7 164 aa8.13□□□□□ -1.11
SCNN1A-214ENST00000539953 A0A087WWC5 75 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 A0A1W2PRE2 83 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 RNF222A6NCQ9 220 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 FABP5P3A8MUU1 101 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 MBP02144 154 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 ASIPP42127 132 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 CRIP1P50238 77 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 ZNF726P1Q15940 193 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 Q5BKY6 102 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 TOR2AQ5JU69 321 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 DNLZQ5SXM8 178 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 NIT1Q86X76 327 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 DEFB104AQ8WTQ1 72 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 TNFSF18Q9UNG2 199 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 ALG5Q9Y673 324 aa8.12□□□□□ -1.11
SCNN1A-214ENST00000539953 FAT3Q8TDW7 4589 aa8.11□□□□□ -1.11
SCNN1A-214ENST00000539953 KRBOX1C9JBD0 128 aa8.11□□□□□ -1.11
SCNN1A-214ENST00000539953 H3BVH4 76 aa8.11□□□□□ -1.11
SCNN1A-214ENST00000539953 S100A4P26447 101 aaKnown RBP8.11□□□□□ -1.11
SCNN1A-214ENST00000539953 FGF8P55075 233 aaPredicted RBP8.11□□□□□ -1.11
SCNN1A-214ENST00000539953 DEFA1P59665 94 aa8.11□□□□□ -1.11
SCNN1A-214ENST00000539953 DEFA3P59666 94 aa8.11□□□□□ -1.11
SCNN1A-214ENST00000539953 Q86TA4 180 aa8.11□□□□□ -1.11
SCNN1A-214ENST00000539953 ACTR3CQ9C0K3 210 aaPredicted RBP8.11□□□□□ -1.11
SCNN1A-214ENST00000539953 B4DEV8 164 aa8.1□□□□□ -1.11
SCNN1A-214ENST00000539953 ARMS2P0C7Q2 107 aa8.1□□□□□ -1.11
SCNN1A-214ENST00000539953 COX8CQ7Z4L0 72 aa8.1□□□□□ -1.11
SCNN1A-214ENST00000539953 Q8N976 141 aa8.1□□□□□ -1.11
SCNN1A-214ENST00000539953 ZC2HC1AQ96GY0 325 aa8.1□□□□□ -1.11
SCNN1A-214ENST00000539953 CHAC1Q9BUX1 264 aa8.1□□□□□ -1.11
SCNN1A-214ENST00000539953 KLK12Q9UKR0 248 aa8.1□□□□□ -1.11
SCNN1A-214ENST00000539953 COX11Q9Y6N1 276 aa8.1□□□□□ -1.11
SCNN1A-214ENST00000539953 HMCN2Q8NDA2 5059 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms