RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 NPIPB3Q92617 1050 aa4.43□□□□□ -1.7
CPSF7-219ENST00000539952 TRAV5A0A0B4J249 113 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 TRAV25A0A0B4J276 109 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 A0A1B0GUT8 65 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 H3BRM9 83 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 TCRAP04437 139 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 COX8AP10176 69 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 GATA2P23769 480 aaPredicted RBP4.42□□□□□ -1.7
CPSF7-219ENST00000539952 GPR183P32249 361 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 FAM106AQ4KMX7 169 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 BVES-AS1Q5T3Y7 98 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 LINC01545Q5VT33 79 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 ZNF493Q6ZR52 646 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 BPIFA4PQ86YQ2 179 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 GPHB5Q86YW7 130 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 TMEM75Q8N9X5 138 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 RNF183Q96D59 192 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 SCRT2Q9NQ03 307 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 HIGD1AQ9Y241 93 aa4.42□□□□□ -1.7
CPSF7-219ENST00000539952 IGKV1D-37A0A075B6S9 117 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 TRAV34A0A0B4J273 112 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 IGHV1-24A0A0C4DH33 117 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 GAGE10A6NGK3 116 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 FAM223BA6NKX1 122 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 ZNF561-AS1K7EIQ3 104 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 TAX1BP3O14907 124 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 SCGB2A1O75556 95 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 TRBV12-3P01733 135 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 CT45A10P0DMU9 189 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 PYYP10082 97 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 RPL27AP46776 148 aaKnown RBP4.41□□□□□ -1.7
CPSF7-219ENST00000539952 MLANAQ16655 118 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 LGALS9BQ3B8N2 356 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 MPV17L2Q567V2 206 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 TMEM97Q5BJF2 176 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 GDF5OSQ5U4N7 250 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 C16orf54Q6UWD8 224 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 FA2HQ7L5A8 372 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 FAM223AQ8IWN6 122 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 KIR2DL5BQ8NHK3 375 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 PRSS3P2Q8NHM4 247 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 RNASE8Q8TDE3 154 aaKnown RBP4.41□□□□□ -1.7
CPSF7-219ENST00000539952 PGLYRP4Q96LB8 373 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 VPS25Q9BRG1 176 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 WFDC10AQ9H1F0 79 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 Q9H3A6 140 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 CST9LQ9H4G1 147 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 KIAA1109Q2LD37 5005 aa4.41□□□□□ -1.7
CPSF7-219ENST00000539952 ALMS1Q8TCU4 4167 aa4.4□□□□□ -1.7
CPSF7-219ENST00000539952 GAGE12BA1L429 117 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 CA1P00915 261 aaPredicted RBP4.4□□□□□ -1.71
CPSF7-219ENST00000539952 IGKV1-16P04430 117 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 CRYGBP07316 175 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 SMIM17P0DL12 118 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 ORM2P19652 201 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 PSG9Q00887 426 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 WT1-ASQ06250 92 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 PDE6HQ13956 83 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 OCIAD2Q56VL3 154 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 TCF24Q7RTU0 167 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 OR10W1Q8NGF6 305 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 OR5A1Q8NGJ0 315 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 OR1B1Q8NGR6 318 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 C11orf45Q8TAV5 145 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 BLNKQ8WV28 456 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 LINC00479Q96M42 142 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 FNDC4Q9H6D8 234 aaPredicted RBP4.4□□□□□ -1.71
CPSF7-219ENST00000539952 SMPXQ9UHP9 88 aa4.4□□□□□ -1.71
CPSF7-219ENST00000539952 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.4□□□□□ -1.71
CPSF7-219ENST00000539952 A0A1B0GVY2 172 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 C9orf118A6NHY6 69 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 IGLV2-23P01705 113 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 APOHP02749 345 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-219ENST00000539952 MYOD1P15172 320 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 CMC4P56277 68 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-219ENST00000539952 SSBP2P81877 361 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-219ENST00000539952 HSD52Q0P140 79 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 DEFB135Q30KP9 77 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 AMMECR1LQ6DCA0 310 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 COX8CQ7Z4L0 72 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 TMEM61Q8N0U2 210 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 TTC9CQ8N5M4 171 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 GTSF1Q8WW33 167 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 SLC25A39Q9BZJ4 359 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-219ENST00000539952 AAMDCQ9H7C9 122 aa4.39□□□□□ -1.71
CPSF7-219ENST00000539952 F11RQ9Y624 299 aaKnown RBP4.39□□□□□ -1.71
CPSF7-219ENST00000539952 FRAS1Q86XX4 4008 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 C7orf71A4D174 169 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 PRSS29PA6NIE9 313 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 CGB1A6NKQ9 187 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 IGLC1P0CG04 106 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 GNG5P63218 68 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 PSG3Q16557 428 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 MAJINQ3KP22 176 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 MORN5Q5VZ52 161 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 Q86TA4 180 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 BOD1L2Q8IYS8 172 aa4.38□□□□□ -1.71
CPSF7-219ENST00000539952 ORMDL3Q8N138 153 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms