RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 GNRH2O43555 120 aa12.7□□□□□ -0.38
LTBR-207ENST00000539925 EVI2AP22794 236 aa12.7□□□□□ -0.38
LTBR-207ENST00000539925 SYT8Q8NBV8 401 aa12.7□□□□□ -0.38
LTBR-207ENST00000539925 OR11H12B2RN74 326 aa12.7□□□□□ -0.38
LTBR-207ENST00000539925 M0R381 172 aa12.7□□□□□ -0.38
LTBR-207ENST00000539925 KRTDAPP60985 99 aa12.7□□□□□ -0.38
LTBR-207ENST00000539925 NSUN5P1Q3KNT7 163 aa12.7□□□□□ -0.38
LTBR-207ENST00000539925 GSN-AS1Q9NRJ2 163 aa12.7□□□□□ -0.38
LTBR-207ENST00000539925 TIMM8BQ9Y5J9 83 aaPredicted RBP12.7□□□□□ -0.38
LTBR-207ENST00000539925 IGHV1-24A0A0C4DH33 117 aa12.69□□□□□ -0.38
LTBR-207ENST00000539925 PCP4L1A6NKN8 68 aa12.69□□□□□ -0.38
LTBR-207ENST00000539925 PRSS47A8MTI9 375 aa12.69□□□□□ -0.38
LTBR-207ENST00000539925 SAP30O75446 220 aa12.69□□□□□ -0.38
LTBR-207ENST00000539925 PRR31Q5SQ13 230 aa12.69□□□□□ -0.38
LTBR-207ENST00000539925 C9orf85Q96MD7 179 aa12.69□□□□□ -0.38
LTBR-207ENST00000539925 LINC00467Q9BRT7 94 aa12.69□□□□□ -0.38
LTBR-207ENST00000539925 IGHV3-16A0A0C4DH30 117 aa12.68□□□□□ -0.38
LTBR-207ENST00000539925 TSTD3H0UI37 97 aa12.68□□□□□ -0.38
LTBR-207ENST00000539925 LEPROTL1O95214 131 aa12.68□□□□□ -0.38
LTBR-207ENST00000539925 TNFRSF6BO95407 300 aa12.68□□□□□ -0.38
LTBR-207ENST00000539925 NPYP01303 97 aa12.68□□□□□ -0.38
LTBR-207ENST00000539925 IGLV1-51P01701 117 aa12.68□□□□□ -0.38
LTBR-207ENST00000539925 BTF3P20290 206 aaKnown RBP12.68□□□□□ -0.38
LTBR-207ENST00000539925 PKIAP61925 76 aa12.68□□□□□ -0.38
LTBR-207ENST00000539925 BAHCC1Q9P281 2608 aa12.68□□□□□ -0.38
LTBR-207ENST00000539925 TRAV12-2A0A075B6T6 113 aa12.67□□□□□ -0.38
LTBR-207ENST00000539925 LINC01546A6NGU7 62 aa12.67□□□□□ -0.38
LTBR-207ENST00000539925 PF4P02776 101 aa12.67□□□□□ -0.38
LTBR-207ENST00000539925 SMIM17P0DL12 118 aa12.67□□□□□ -0.38
LTBR-207ENST00000539925 NUTF2P61970 127 aaKnown RBP12.67□□□□□ -0.38
LTBR-207ENST00000539925 C3orf79P0CE67 100 aa12.67□□□□□ -0.38
LTBR-207ENST00000539925 IFI27P40305 119 aaPredicted RBP12.67□□□□□ -0.38
LTBR-207ENST00000539925 PMCHL1Q16048 86 aa12.67□□□□□ -0.38
LTBR-207ENST00000539925 ODF3L2Q3SX64 289 aa12.67□□□□□ -0.38
LTBR-207ENST00000539925 PIK3CD-AS1Q5SR53 167 aa12.67□□□□□ -0.38
LTBR-207ENST00000539925 STHQ8IWL8 128 aa12.67□□□□□ -0.38
LTBR-207ENST00000539925 C20orf202A1L168 122 aa12.66□□□□□ -0.38
LTBR-207ENST00000539925 TEX43Q6ZNM6 134 aa12.66□□□□□ -0.38
LTBR-207ENST00000539925 Q8N1Y9 231 aa12.66□□□□□ -0.38
LTBR-207ENST00000539925 POM121L12Q8N7R1 296 aa12.66□□□□□ -0.38
LTBR-207ENST00000539925 TMEM70Q9BUB7 260 aa12.66□□□□□ -0.38
LTBR-207ENST00000539925 INSP01308 110 aa12.65□□□□□ -0.38
LTBR-207ENST00000539925 INSL3P51460 131 aa12.65□□□□□ -0.38
LTBR-207ENST00000539925 HIST2H2BDQ6DRA6 164 aa12.65□□□□□ -0.38
LTBR-207ENST00000539925 C20orf78Q9BR46 151 aa12.65□□□□□ -0.38
LTBR-207ENST00000539925 LOC389332A0A1B0GUA5 103 aa12.64□□□□□ -0.39
LTBR-207ENST00000539925 SMKR1H3BMG3 65 aa12.64□□□□□ -0.39
LTBR-207ENST00000539925 K7EMI3 77 aa12.64□□□□□ -0.39
LTBR-207ENST00000539925 CRXO43186 299 aaPredicted RBP12.64□□□□□ -0.39
LTBR-207ENST00000539925 NCR2O95944 276 aa12.64□□□□□ -0.39
LTBR-207ENST00000539925 CDPF1Q6NVV7 123 aa12.64□□□□□ -0.39
LTBR-207ENST00000539925 Q8N8P6 123 aa12.64□□□□□ -0.39
LTBR-207ENST00000539925 MAP1LC3CQ9BXW4 147 aa12.64□□□□□ -0.39
LTBR-207ENST00000539925 CBY3A6NI87 242 aa12.64□□□□□ -0.39
LTBR-207ENST00000539925 PTH2Q96A98 100 aa12.64□□□□□ -0.39
LTBR-207ENST00000539925 OTOGQ6ZRI0 2925 aa12.63□□□□□ -0.39
LTBR-207ENST00000539925 HBDP02042 147 aa12.63□□□□□ -0.39
LTBR-207ENST00000539925 BEAN1Q3B7T3 259 aa12.63□□□□□ -0.39
LTBR-207ENST00000539925 PET117Q6UWS5 81 aa12.63□□□□□ -0.39
LTBR-207ENST00000539925 TRPT1Q86TN4 253 aaKnown RBP12.63□□□□□ -0.39
LTBR-207ENST00000539925 NRACQ8N912 160 aa12.63□□□□□ -0.39
LTBR-207ENST00000539925 SORL1Q92673 2214 aa12.63□□□□□ -0.39
LTBR-207ENST00000539925 RBMY1BA6NDE4 496 aaKnown RBP12.62□□□□□ -0.39
LTBR-207ENST00000539925 RBMY1EA6NEQ0 496 aaKnown RBP12.62□□□□□ -0.39
LTBR-207ENST00000539925 RBMY1DP0C7P1 496 aaKnown RBP12.62□□□□□ -0.39
LTBR-207ENST00000539925 C14orf178Q8N769 122 aaPredicted RBP12.62□□□□□ -0.39
LTBR-207ENST00000539925 LINC00482Q8N8I6 264 aa12.62□□□□□ -0.39
LTBR-207ENST00000539925 KRTAP10-3P60369 221 aa12.61□□□□□ -0.39
LTBR-207ENST00000539925 ZNF415Q09FC8 603 aa12.61□□□□□ -0.39
LTBR-207ENST00000539925 NDUFAF3Q9BU61 184 aa12.61□□□□□ -0.39
LTBR-207ENST00000539925 SPATA12Q7Z6I5 190 aa12.61□□□□□ -0.39
LTBR-207ENST00000539925 SPXQ9BT56 116 aa12.61□□□□□ -0.39
LTBR-207ENST00000539925 VAMP8Q9BV40 100 aa12.61□□□□□ -0.39
LTBR-207ENST00000539925 MDFICQ9P1T7 246 aa12.61□□□□□ -0.39
LTBR-207ENST00000539925 KIF25-AS1Q9Y6Z4 181 aa12.61□□□□□ -0.39
LTBR-207ENST00000539925 SYS1-DBNDD2H3BUS1 97 aa12.6□□□□□ -0.39
LTBR-207ENST00000539925 MGPP08493 103 aa12.6□□□□□ -0.39
LTBR-207ENST00000539925 FXYD7P58549 80 aa12.6□□□□□ -0.39
LTBR-207ENST00000539925 RPL32P62910 135 aaKnown RBP12.6□□□□□ -0.39
LTBR-207ENST00000539925 ZNF664Q8N3J9 261 aa12.6□□□□□ -0.39
LTBR-207ENST00000539925 Q8N976 141 aa12.6□□□□□ -0.39
LTBR-207ENST00000539925 ZNF747Q9BV97 191 aa12.6□□□□□ -0.39
LTBR-207ENST00000539925 FN1P02751 2386 aaKnown RBP12.59□□□□□ -0.39
LTBR-207ENST00000539925 FCER1GP30273 86 aa12.59□□□□□ -0.39
LTBR-207ENST00000539925 ZNF124Q15973 351 aa12.59□□□□□ -0.39
LTBR-207ENST00000539925 LINC01587Q99440 93 aa12.59□□□□□ -0.39
LTBR-207ENST00000539925 NSD1Q96L73 2696 aaPredicted RBP12.59□□□□□ -0.39
LTBR-207ENST00000539925 AGRNO00468 2067 aa12.59□□□□□ -0.39
LTBR-207ENST00000539925 G0S2P27469 103 aa12.58□□□□□ -0.4
LTBR-207ENST00000539925 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
LTBR-207ENST00000539925 MORN3Q6PF18 240 aaPredicted RBP12.58□□□□□ -0.4
LTBR-207ENST00000539925 SMIM2Q9BVW6 85 aa12.58□□□□□ -0.4
LTBR-207ENST00000539925 C1QTNF4Q9BXJ3 329 aa12.58□□□□□ -0.4
LTBR-207ENST00000539925 WNK1Q9H4A3 2382 aa12.58□□□□□ -0.4
LTBR-207ENST00000539925 IGLV2-18A0A075B6J9 118 aa12.57□□□□□ -0.4
LTBR-207ENST00000539925 KIR2DL5BA0A0G2JN68 375 aa12.57□□□□□ -0.4
LTBR-207ENST00000539925 KIR2DL5BA0A0G2JPC4 375 aa12.57□□□□□ -0.4
LTBR-207ENST00000539925 LINC01549A6NIU2 74 aa12.57□□□□□ -0.4
LTBR-207ENST00000539925 M0R2P5 195 aa12.57□□□□□ -0.4
LTBR-207ENST00000539925 RBMY1A1P0DJD3 496 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms