RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 IGHV4-4A0A075B6R2 117 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 H3BMM0 161 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 EVI2AP22794 236 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 CKS2P33552 79 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 ORMDL3Q8N138 153 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 SIGLEC8Q9NYZ4 499 aa16.62■□□□□ 0.25
HOMER3-204ENST00000539827 M0R381 172 aa16.61■□□□□ 0.25
HOMER3-204ENST00000539827 RNASE3P12724 160 aaKnown RBP16.61■□□□□ 0.25
HOMER3-204ENST00000539827 C14orf144Q96I85 54 aa16.61■□□□□ 0.25
HOMER3-204ENST00000539827 RBMY1BA6NDE4 496 aaKnown RBP16.6■□□□□ 0.25
HOMER3-204ENST00000539827 RBMY1EA6NEQ0 496 aaKnown RBP16.6■□□□□ 0.25
HOMER3-204ENST00000539827 SAP30O75446 220 aa16.6■□□□□ 0.25
HOMER3-204ENST00000539827 RBMY1DP0C7P1 496 aaKnown RBP16.6■□□□□ 0.25
HOMER3-204ENST00000539827 LINC00614P0C842 121 aa16.6■□□□□ 0.25
HOMER3-204ENST00000539827 PMCHL1Q16048 86 aa16.6■□□□□ 0.25
HOMER3-204ENST00000539827 NDUFAF3Q9BU61 184 aa16.6■□□□□ 0.25
HOMER3-204ENST00000539827 PHLDA3Q9Y5J5 127 aa16.6■□□□□ 0.25
HOMER3-204ENST00000539827 KIR2DL5BA0A0G2JN68 375 aa16.59■□□□□ 0.25
HOMER3-204ENST00000539827 KIR2DL5BA0A0G2JPC4 375 aa16.59■□□□□ 0.25
HOMER3-204ENST00000539827 LOC389332A0A1B0GUA5 103 aa16.59■□□□□ 0.25
HOMER3-204ENST00000539827 CD7P09564 240 aa16.59■□□□□ 0.25
HOMER3-204ENST00000539827 MED14OSP0DP75 135 aa16.59■□□□□ 0.25
HOMER3-204ENST00000539827 SMIM15Q7Z3B0 74 aa16.59■□□□□ 0.25
HOMER3-204ENST00000539827 NDUFA11Q86Y39 141 aa16.59■□□□□ 0.25
HOMER3-204ENST00000539827 KIR2DL5AQ8N109 375 aa16.59■□□□□ 0.25
HOMER3-204ENST00000539827 CHCHD1Q96BP2 118 aaKnown RBP16.59■□□□□ 0.25
HOMER3-204ENST00000539827 SCRT2Q9NQ03 307 aa16.59■□□□□ 0.25
HOMER3-204ENST00000539827 GAS8-AS1O95177 125 aa16.58■□□□□ 0.25
HOMER3-204ENST00000539827 LURAP1LQ8IV03 231 aa16.58■□□□□ 0.25
HOMER3-204ENST00000539827 A8MTW9 85 aa16.58■□□□□ 0.24
HOMER3-204ENST00000539827 NPYP01303 97 aa16.58■□□□□ 0.24
HOMER3-204ENST00000539827 TEX43Q6ZNM6 134 aa16.58■□□□□ 0.24
HOMER3-204ENST00000539827 ODF3L2Q3SX64 289 aa16.57■□□□□ 0.24
HOMER3-204ENST00000539827 PRSS3P2Q8NHM4 247 aa16.57■□□□□ 0.24
HOMER3-204ENST00000539827 TEP1Q99973 2627 aaKnown RBP16.57■□□□□ 0.24
HOMER3-204ENST00000539827 KRTDAPP60985 99 aa16.57■□□□□ 0.24
HOMER3-204ENST00000539827 LBHQ53QV2 105 aaPredicted RBP16.57■□□□□ 0.24
HOMER3-204ENST00000539827 IGHV1OR15-1A0A075B7D0 117 aa16.56■□□□□ 0.24
HOMER3-204ENST00000539827 GATA1P15976 413 aaPredicted RBP16.56■□□□□ 0.24
HOMER3-204ENST00000539827 IFI27P40305 119 aaPredicted RBP16.56■□□□□ 0.24
HOMER3-204ENST00000539827 CRXO43186 299 aaPredicted RBP16.55■□□□□ 0.24
HOMER3-204ENST00000539827 RBMY1A1P0DJD3 496 aaKnown RBP16.55■□□□□ 0.24
HOMER3-204ENST00000539827 RBMY1CP0DJD4 496 aa16.55■□□□□ 0.24
HOMER3-204ENST00000539827 RBMY1FQ15415 496 aaKnown RBP16.55■□□□□ 0.24
HOMER3-204ENST00000539827 TDRG1Q3Y452 100 aa16.55■□□□□ 0.24
HOMER3-204ENST00000539827 NSD1Q96L73 2696 aaPredicted RBP16.55■□□□□ 0.24
HOMER3-204ENST00000539827 IGHV1-24A0A0C4DH33 117 aa16.55■□□□□ 0.24
HOMER3-204ENST00000539827 FA2HQ7L5A8 372 aa16.55■□□□□ 0.24
HOMER3-204ENST00000539827 F8P00451 2351 aa16.53■□□□□ 0.24
HOMER3-204ENST00000539827 IGHV3-16A0A0C4DH30 117 aa16.53■□□□□ 0.24
HOMER3-204ENST00000539827 PPBPP02775 128 aa16.53■□□□□ 0.24
HOMER3-204ENST00000539827 Q8N1Y9 231 aa16.53■□□□□ 0.24
HOMER3-204ENST00000539827 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.53■□□□□ 0.24
HOMER3-204ENST00000539827 MDFICQ9P1T7 246 aa16.53■□□□□ 0.24
HOMER3-204ENST00000539827 TRAV26-2A0A0B4J265 109 aa16.53■□□□□ 0.24
HOMER3-204ENST00000539827 PF4P02776 101 aa16.53■□□□□ 0.24
HOMER3-204ENST00000539827 C14orf178Q8N769 122 aaPredicted RBP16.53■□□□□ 0.24
HOMER3-204ENST00000539827 C20orf144Q9BQM9 153 aa16.53■□□□□ 0.24
HOMER3-204ENST00000539827 VAMP8Q9BV40 100 aa16.52■□□□□ 0.24
HOMER3-204ENST00000539827 MUC4Q99102 2169 aa16.52■□□□□ 0.23
HOMER3-204ENST00000539827 OR11H12B2RN74 326 aa16.51■□□□□ 0.23
HOMER3-204ENST00000539827 TNFRSF6BO95407 300 aa16.51■□□□□ 0.23
HOMER3-204ENST00000539827 IGLV1-51P01701 117 aa16.51■□□□□ 0.23
HOMER3-204ENST00000539827 C3orf79P0CE67 100 aa16.51■□□□□ 0.23
HOMER3-204ENST00000539827 AP5S1Q9NUS5 200 aa16.51■□□□□ 0.23
HOMER3-204ENST00000539827 C9orf85Q96MD7 179 aa16.5■□□□□ 0.23
HOMER3-204ENST00000539827 NXPH4O95158 308 aa16.49■□□□□ 0.23
HOMER3-204ENST00000539827 LINC00173Q6ZV60 143 aa16.49■□□□□ 0.23
HOMER3-204ENST00000539827 MAP1LC3AQ9H492 121 aa16.49■□□□□ 0.23
HOMER3-204ENST00000539827 DPH3P1Q9H4G8 78 aa16.49■□□□□ 0.23
HOMER3-204ENST00000539827 C2CD3Q4AC94 2353 aa16.49■□□□□ 0.23
HOMER3-204ENST00000539827 HTN1P15515 57 aa16.49■□□□□ 0.23
HOMER3-204ENST00000539827 STHQ8IWL8 128 aa16.49■□□□□ 0.23
HOMER3-204ENST00000539827 OR2K2Q8NGT1 345 aa16.49■□□□□ 0.23
HOMER3-204ENST00000539827 CBY3A6NI87 242 aa16.48■□□□□ 0.23
HOMER3-204ENST00000539827 MGPP08493 103 aa16.48■□□□□ 0.23
HOMER3-204ENST00000539827 LINC00482Q8N8I6 264 aa16.48■□□□□ 0.23
HOMER3-204ENST00000539827 Q8N976 141 aa16.48■□□□□ 0.23
HOMER3-204ENST00000539827 AP1S3Q96PC3 154 aa16.48■□□□□ 0.23
HOMER3-204ENST00000539827 JPT2Q9H910 190 aa16.48■□□□□ 0.23
HOMER3-204ENST00000539827 MRPL52Q86TS9 123 aaKnown RBP16.47■□□□□ 0.23
HOMER3-204ENST00000539827 LAMTOR2Q9Y2Q5 125 aa16.47■□□□□ 0.23
HOMER3-204ENST00000539827 PRM2P04554 102 aa16.47■□□□□ 0.23
HOMER3-204ENST00000539827 TRGV11A0A075B6L2 103 aa16.46■□□□□ 0.23
HOMER3-204ENST00000539827 LEPROTL1O95214 131 aa16.46■□□□□ 0.23
HOMER3-204ENST00000539827 NRACQ8N912 160 aa16.46■□□□□ 0.23
HOMER3-204ENST00000539827 C2orf88Q9BSF0 95 aa16.46■□□□□ 0.23
HOMER3-204ENST00000539827 MRAP2Q96G30 205 aa16.46■□□□□ 0.22
HOMER3-204ENST00000539827 TRPT1Q86TN4 253 aaKnown RBP16.44■□□□□ 0.22
HOMER3-204ENST00000539827 CLUHP3Q96NS8 147 aa16.44■□□□□ 0.22
HOMER3-204ENST00000539827 WFDC10AQ9H1F0 79 aa16.44■□□□□ 0.22
HOMER3-204ENST00000539827 CMC4P56277 68 aaPredicted RBP16.44■□□□□ 0.22
HOMER3-204ENST00000539827 BEAN1Q3B7T3 259 aa16.44■□□□□ 0.22
HOMER3-204ENST00000539827 LINC01587Q99440 93 aa16.44■□□□□ 0.22
HOMER3-204ENST00000539827 XCL2Q9UBD3 114 aa16.44■□□□□ 0.22
HOMER3-204ENST00000539827 KIF25-AS1Q9Y6Z4 181 aa16.44■□□□□ 0.22
HOMER3-204ENST00000539827 INSP01308 110 aa16.43■□□□□ 0.22
HOMER3-204ENST00000539827 BTF3P20290 206 aaKnown RBP16.43■□□□□ 0.22
HOMER3-204ENST00000539827 MIEN1Q9BRT3 115 aa16.43■□□□□ 0.22
HOMER3-204ENST00000539827 PAM16Q9Y3D7 125 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms