RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PDE6DO43924 150 aa10.99□□□□□ -0.65
RPAIN-206ENST00000539417 NUDT3O95989 172 aa10.99□□□□□ -0.65
RPAIN-206ENST00000539417 FHL2Q14192 279 aa10.99□□□□□ -0.65
RPAIN-206ENST00000539417 DNAH2Q9P225 4427 aa10.99□□□□□ -0.65
RPAIN-206ENST00000539417 NACAE9PAV3 2078 aa10.98□□□□□ -0.65
RPAIN-206ENST00000539417 LINC01559Q495D7 138 aa10.98□□□□□ -0.65
RPAIN-206ENST00000539417 ZNF506Q5JVG8 444 aa10.98□□□□□ -0.65
RPAIN-206ENST00000539417 PRR27Q6MZM9 219 aa10.98□□□□□ -0.65
RPAIN-206ENST00000539417 H3BVH4 76 aa10.97□□□□□ -0.65
RPAIN-206ENST00000539417 ASIPP42127 132 aa10.96□□□□□ -0.65
RPAIN-206ENST00000539417 ZNF876PQ49A33 203 aa10.96□□□□□ -0.65
RPAIN-206ENST00000539417 ARMS2P0C7Q2 107 aa10.95□□□□□ -0.66
RPAIN-206ENST00000539417 S100A4P26447 101 aaKnown RBP10.95□□□□□ -0.66
RPAIN-206ENST00000539417 DNLZQ5SXM8 178 aa10.95□□□□□ -0.66
RPAIN-206ENST00000539417 C15orf53Q8NAA6 179 aa10.95□□□□□ -0.66
RPAIN-206ENST00000539417 TRAV4A0A0B4J268 109 aa10.94□□□□□ -0.66
RPAIN-206ENST00000539417 MGST1P10620 155 aaKnown RBP10.94□□□□□ -0.66
RPAIN-206ENST00000539417 TAGLN2P37802 199 aaKnown RBP10.94□□□□□ -0.66
RPAIN-206ENST00000539417 GNG4P50150 75 aa10.94□□□□□ -0.66
RPAIN-206ENST00000539417 CRYBA4P53673 196 aa10.94□□□□□ -0.66
RPAIN-206ENST00000539417 CFAP126Q5VTH2 177 aa10.94□□□□□ -0.66
RPAIN-206ENST00000539417 OR4C5Q8NGB2 326 aa10.94□□□□□ -0.66
RPAIN-206ENST00000539417 PARLQ9H300 379 aa10.94□□□□□ -0.66
RPAIN-206ENST00000539417 JPT2Q9H910 190 aa10.94□□□□□ -0.66
RPAIN-206ENST00000539417 IL36BQ9NZH7 164 aa10.94□□□□□ -0.66
RPAIN-206ENST00000539417 IGHV3-73A0A0B4J1V6 119 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 RS1O15537 224 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 P0DMU3 169 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 FAM231AP0DMU4 169 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 FAM231CP0DMU5 169 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 DMRTA1Q5VZB9 504 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 SCRT2Q9NQ03 307 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 HHLA3Q9XRX5 114 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 FRAS1Q86XX4 4008 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 A0A096LPF7 62 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 TRGV4A0A0C4DH28 118 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 C19orf71A6NCJ1 209 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 C9JQL5 133 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 K7EN84 100 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 SRSF3P84103 164 aaKnown RBP10.93□□□□□ -0.66
RPAIN-206ENST00000539417 OCC1Q8TAD7 63 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 PTH2Q96A98 100 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 SAMD10Q9BYL1 202 aa10.93□□□□□ -0.66
RPAIN-206ENST00000539417 EIF5A2Q9GZV4 153 aaKnown RBP10.93□□□□□ -0.66
RPAIN-206ENST00000539417 EPPK1P58107 5090 aaKnown RBP10.92□□□□□ -0.66
RPAIN-206ENST00000539417 LOC100131303A0A0U1RQF7 123 aa10.92□□□□□ -0.66
RPAIN-206ENST00000539417 PAX4O43316 350 aa10.92□□□□□ -0.66
RPAIN-206ENST00000539417 GZMBP10144 247 aa10.92□□□□□ -0.66
RPAIN-206ENST00000539417 CEBPGP53567 150 aa10.92□□□□□ -0.66
RPAIN-206ENST00000539417 PRO0255Q9UI72 69 aa10.92□□□□□ -0.66
RPAIN-206ENST00000539417 MUC21A0A0G2JKD1 596 aa10.91□□□□□ -0.66
RPAIN-206ENST00000539417 MUC21A0A140T8X8 626 aa10.91□□□□□ -0.66
RPAIN-206ENST00000539417 TMEM250H0YL14 139 aa10.91□□□□□ -0.66
RPAIN-206ENST00000539417 H3BNG1 76 aa10.91□□□□□ -0.66
RPAIN-206ENST00000539417 SRP19P09132 144 aaKnown RBP10.91□□□□□ -0.66
RPAIN-206ENST00000539417 ESRGQ1W209 222 aa10.91□□□□□ -0.66
RPAIN-206ENST00000539417 Q6ZSN1 163 aa10.91□□□□□ -0.66
RPAIN-206ENST00000539417 UBE2DNLQ8IWF7 75 aa10.91□□□□□ -0.66
RPAIN-206ENST00000539417 LINC00588Q9Y4M8 146 aa10.91□□□□□ -0.66
RPAIN-206ENST00000539417 TMEM218A2RU14 115 aa10.9□□□□□ -0.66
RPAIN-206ENST00000539417 IGLV2-18A0A075B6J9 118 aa10.89□□□□□ -0.67
RPAIN-206ENST00000539417 M0R381 172 aa10.89□□□□□ -0.67
RPAIN-206ENST00000539417 GATA1P15976 413 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-206ENST00000539417 OR10AG1Q8NH19 301 aa10.89□□□□□ -0.67
RPAIN-206ENST00000539417 SMIM12Q96EX1 92 aa10.89□□□□□ -0.67
RPAIN-206ENST00000539417 DNAH17Q9UFH2 4485 aa10.89□□□□□ -0.67
RPAIN-206ENST00000539417 APOC3P02656 99 aa10.88□□□□□ -0.67
RPAIN-206ENST00000539417 CXCL1P09341 107 aa10.88□□□□□ -0.67
RPAIN-206ENST00000539417 RNF212Q495C1 297 aa10.88□□□□□ -0.67
RPAIN-206ENST00000539417 UFSP1Q6NVU6 142 aa10.88□□□□□ -0.67
RPAIN-206ENST00000539417 NUDT10Q8NFP7 164 aa10.88□□□□□ -0.67
RPAIN-206ENST00000539417 OR2D3Q8NGH3 330 aa10.88□□□□□ -0.67
RPAIN-206ENST00000539417 NUDT11Q96G61 164 aa10.88□□□□□ -0.67
RPAIN-206ENST00000539417 RNASE7Q9H1E1 156 aaKnown RBP10.88□□□□□ -0.67
RPAIN-206ENST00000539417 Q9UF83 564 aa10.88□□□□□ -0.67
RPAIN-206ENST00000539417 PHLDA3Q9Y5J5 127 aa10.88□□□□□ -0.67
RPAIN-206ENST00000539417 K7EQD1 137 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 M0R2N4 97 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 SNAI2O43623 268 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 GYPEP15421 78 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 SSTP61278 116 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 SLC25A29Q8N8R3 303 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 ZNRF2Q8NHG8 242 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 SSBP4Q9BWG4 385 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-206ENST00000539417 FAT2Q9NYQ8 4349 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 A0A087WWL8 130 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 SLAQ13239 276 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 PEA15Q15121 130 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 C10orf91Q5T1B1 145 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 SVBPQ8N300 66 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 DAZAP1Q96EP5 407 aaKnown RBP10.87□□□□□ -0.67
RPAIN-206ENST00000539417 SEC11CQ9BY50 192 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 CARHSP1Q9Y2V2 147 aaKnown RBP10.87□□□□□ -0.67
RPAIN-206ENST00000539417 ICOSQ9Y6W8 199 aa10.87□□□□□ -0.67
RPAIN-206ENST00000539417 F8W036 122 aa10.86□□□□□ -0.67
RPAIN-206ENST00000539417 NXPH4O95158 308 aa10.86□□□□□ -0.67
RPAIN-206ENST00000539417 P01737 135 aa10.86□□□□□ -0.67
RPAIN-206ENST00000539417 CRYGDP07320 174 aa10.86□□□□□ -0.67
RPAIN-206ENST00000539417 IGLC6P0CF74 106 aa10.86□□□□□ -0.67
RPAIN-206ENST00000539417 MED14OSP0DP75 135 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms