RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 CIDEAO60543 219 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 GCGP01275 180 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 ATP6V0CP27449 155 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 DEFA1P59665 94 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 DEFA3P59666 94 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 FLI1Q01543 452 aaPredicted RBP5.64□□□□□ -1.51
USP28-203ENST00000537490 RHOHQ15669 191 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 ZNF506Q5JVG8 444 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 LELP1Q5T871 98 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 PRNTQ86SH4 94 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 Q8N814 137 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 OR2G3Q8NGZ4 309 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 ATP6V0E2Q8NHE4 81 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 NTN5Q8WTR8 489 aaPredicted RBP5.64□□□□□ -1.51
USP28-203ENST00000537490 PTH2Q96A98 100 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 FAM30AQ9NZY2 134 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 EPDR1Q9UM22 224 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 ALG5Q9Y673 324 aa5.64□□□□□ -1.51
USP28-203ENST00000537490 FLG2Q5D862 2391 aaPredicted RBP5.63□□□□□ -1.51
USP28-203ENST00000537490 GGTLC3B5MD39 225 aa5.63□□□□□ -1.51
USP28-203ENST00000537490 WFDC2Q14508 124 aa5.63□□□□□ -1.51
USP28-203ENST00000537490 SMUG1Q53HV7 270 aa5.63□□□□□ -1.51
USP28-203ENST00000537490 Q8N3U1 123 aa5.63□□□□□ -1.51
USP28-203ENST00000537490 LINC00479Q96M42 142 aa5.63□□□□□ -1.51
USP28-203ENST00000537490 PSMG3Q9BT73 122 aaPredicted RBP5.63□□□□□ -1.51
USP28-203ENST00000537490 TMEM70Q9BUB7 260 aa5.63□□□□□ -1.51
USP28-203ENST00000537490 GTSF1LQ9H1H1 148 aa5.63□□□□□ -1.51
USP28-203ENST00000537490 SH3BGRL3Q9H299 93 aa5.63□□□□□ -1.51
USP28-203ENST00000537490 Q9UF83 564 aa5.63□□□□□ -1.51
USP28-203ENST00000537490 TRAV34A0A0B4J273 112 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 IGKV3D-20A0A0C4DH25 116 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 GAGE12JA6NER3 117 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 FAM229AH3BQW9 127 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 K7EQM0 130 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 MGST1P10620 155 aaKnown RBP5.62□□□□□ -1.51
USP28-203ENST00000537490 SERF2P84101 59 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 GAGE1Q13065 139 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 GAGE4Q13068 117 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 GAGE5Q13069 117 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 GAGE13Q4V321 117 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 Q5BKY6 102 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 CYB561D1Q8N8Q1 229 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 AQP10Q96PS8 301 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 PARLQ9H300 379 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 JPT2Q9H910 190 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 TMEM167BQ9NRX6 74 aa5.62□□□□□ -1.51
USP28-203ENST00000537490 DMBT1Q9UGM3 2413 aaPredicted RBP5.62□□□□□ -1.51
USP28-203ENST00000537490 CXorf1O96002 111 aa5.61□□□□□ -1.51
USP28-203ENST00000537490 MBP02144 154 aa5.61□□□□□ -1.51
USP28-203ENST00000537490 LINC00694P0DN24 101 aa5.61□□□□□ -1.51
USP28-203ENST00000537490 LGALSLQ3ZCW2 172 aaPredicted RBP5.61□□□□□ -1.51
USP28-203ENST00000537490 ZFP69Q49AA0 526 aa5.61□□□□□ -1.51
USP28-203ENST00000537490 SAPCD1Q5SSQ6 148 aa5.61□□□□□ -1.51
USP28-203ENST00000537490 OR2T35Q8NGX2 323 aa5.61□□□□□ -1.51
USP28-203ENST00000537490 SAMD10Q9BYL1 202 aa5.61□□□□□ -1.51
USP28-203ENST00000537490 ACTR3CQ9C0K3 210 aaPredicted RBP5.61□□□□□ -1.51
USP28-203ENST00000537490 TNFSF18Q9UNG2 199 aa5.61□□□□□ -1.51
USP28-203ENST00000537490 A0A1W2PRE2 83 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 FABP5P3A8MUU1 101 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 A8MWV9 139 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 LECT2O14960 151 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 S100A4P26447 101 aaKnown RBP5.6□□□□□ -1.51
USP28-203ENST00000537490 CRIP1P50238 77 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 LAGE3Q14657 143 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 ZNF726P1Q15940 193 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 RPL7L1Q6DKI1 246 aaKnown RBP5.6□□□□□ -1.51
USP28-203ENST00000537490 UFSP1Q6NVU6 142 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 ZFP2Q6ZN57 461 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 DAZ4Q86SG3 579 aaKnown RBP5.6□□□□□ -1.51
USP28-203ENST00000537490 C14orf178Q8N769 122 aaPredicted RBP5.6□□□□□ -1.51
USP28-203ENST00000537490 TM2D2Q9BX73 214 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 DAZ3Q9NR90 486 aaKnown RBP5.6□□□□□ -1.51
USP28-203ENST00000537490 ARL2-SNX15V9GYD0 113 aa5.6□□□□□ -1.51
USP28-203ENST00000537490 C1QBP02746 253 aa5.59□□□□□ -1.51
USP28-203ENST00000537490 ASIPP42127 132 aa5.59□□□□□ -1.51
USP28-203ENST00000537490 UBE2G2P60604 165 aa5.59□□□□□ -1.51
USP28-203ENST00000537490 PIK3CD-AS1Q5SR53 167 aa5.59□□□□□ -1.51
USP28-203ENST00000537490 MED28Q9H204 178 aa5.59□□□□□ -1.51
USP28-203ENST00000537490 IL36BQ9NZH7 164 aa5.59□□□□□ -1.51
USP28-203ENST00000537490 HERC1Q15751 4861 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.58□□□□□ -1.52
USP28-203ENST00000537490 TRAV8-3A0A0A6YYJ7 113 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 CTXND1A0A1B0GTU2 59 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 GRIFINA4D1Z8 144 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 RNF222A6NCQ9 220 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 B4DEV8 164 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 KRBOX1C9JBD0 128 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 H3BVH4 76 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 M0R036 132 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 PEX7O00628 323 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 IFNA7P01567 189 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 ARMS2P0C7Q2 107 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 FGF8P55075 233 aaPredicted RBP5.58□□□□□ -1.52
USP28-203ENST00000537490 BAALCQ8WXS3 180 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 ZC2HC1AQ96GY0 325 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 DNAJC30Q96LL9 226 aa5.58□□□□□ -1.52
USP28-203ENST00000537490 A0A087WWC5 75 aa5.57□□□□□ -1.52
USP28-203ENST00000537490 FAM74A7A6NL05 159 aa5.57□□□□□ -1.52
USP28-203ENST00000537490 SH2D1AO60880 128 aa5.57□□□□□ -1.52
USP28-203ENST00000537490 GIPP09681 153 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms