RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TVP23CQ96ET8 276 aa8.59□□□□□ -1.03
TNFRSF1A-207ENST00000535958 A8MWV9 139 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 HMGB3O15347 200 aaKnown RBP8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 SSNA1O43805 119 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 RPL12P30050 165 aaKnown RBP8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 RAB2AP61019 212 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 LGALSLQ3ZCW2 172 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 SMUG1Q53HV7 270 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 SCXQ7RTU7 201 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 DAZ4Q86SG3 579 aaKnown RBP8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 Q8N976 141 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 C5orf17Q8NAS9 161 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 OR10G9Q8NGN4 311 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 OR10G7Q8NGN6 311 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 BAALCQ8WXS3 180 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 C9orf85Q96MD7 179 aa8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 DAZ3Q9NR90 486 aaKnown RBP8.58□□□□□ -1.04
TNFRSF1A-207ENST00000535958 IGKV2D-24A0A075B6R9 120 aa8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 PGPEP1LA6NFU8 196 aa8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 ARL14EPLP0DKL9 152 aa8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 CDC34P49427 236 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 FGF8P55075 233 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 ZFP2Q6ZN57 461 aa8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 PRNTQ86SH4 94 aa8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 Q8N3U1 123 aa8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 TMEM75Q8N9X5 138 aa8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 NDUFA13Q9P0J0 144 aa8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 PSG8Q9UQ74 426 aa8.57□□□□□ -1.04
TNFRSF1A-207ENST00000535958 MPC2O95563 127 aa8.56□□□□□ -1.04
TNFRSF1A-207ENST00000535958 TCRAP04437 139 aa8.56□□□□□ -1.04
TNFRSF1A-207ENST00000535958 FLI1Q01543 452 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF1A-207ENST00000535958 LINC01620Q4KN68 170 aa8.56□□□□□ -1.04
TNFRSF1A-207ENST00000535958 CYB561D1Q8N8Q1 229 aa8.56□□□□□ -1.04
TNFRSF1A-207ENST00000535958 OR2T35Q8NGX2 323 aa8.56□□□□□ -1.04
TNFRSF1A-207ENST00000535958 S100ZQ8WXG8 99 aa8.56□□□□□ -1.04
TNFRSF1A-207ENST00000535958 PTH2Q96A98 100 aa8.56□□□□□ -1.04
TNFRSF1A-207ENST00000535958 PARLQ9H300 379 aa8.56□□□□□ -1.04
TNFRSF1A-207ENST00000535958 A0A087WX48 190 aa8.55□□□□□ -1.04
TNFRSF1A-207ENST00000535958 INMT-MINDY4F8WBC2 141 aa8.55□□□□□ -1.04
TNFRSF1A-207ENST00000535958 ASIPP42127 132 aa8.55□□□□□ -1.04
TNFRSF1A-207ENST00000535958 ZNF80P51504 273 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF1A-207ENST00000535958 ELOBQ15370 118 aa8.55□□□□□ -1.04
TNFRSF1A-207ENST00000535958 SAPCD1Q5SSQ6 148 aa8.55□□□□□ -1.04
TNFRSF1A-207ENST00000535958 C11orf21Q9P2W6 132 aa8.55□□□□□ -1.04
TNFRSF1A-207ENST00000535958 RHODO00212 210 aa8.54□□□□□ -1.04
TNFRSF1A-207ENST00000535958 RNASE3P12724 160 aaKnown RBP8.54□□□□□ -1.04
TNFRSF1A-207ENST00000535958 H2BFSP57053 126 aa8.54□□□□□ -1.04
TNFRSF1A-207ENST00000535958 UBE2WQ96B02 151 aa8.54□□□□□ -1.04
TNFRSF1A-207ENST00000535958 CHAC1Q9BUX1 264 aa8.54□□□□□ -1.04
TNFRSF1A-207ENST00000535958 OXTP01178 125 aa8.53□□□□□ -1.04
TNFRSF1A-207ENST00000535958 C14orf177Q52M58 125 aa8.53□□□□□ -1.04
TNFRSF1A-207ENST00000535958 PIK3CD-AS1Q5SR53 167 aa8.53□□□□□ -1.04
TNFRSF1A-207ENST00000535958 FAM74A4Q5TZK3 123 aa8.53□□□□□ -1.04
TNFRSF1A-207ENST00000535958 TMEM167BQ9NRX6 74 aa8.53□□□□□ -1.04
TNFRSF1A-207ENST00000535958 KLK12Q9UKR0 248 aa8.53□□□□□ -1.04
TNFRSF1A-207ENST00000535958 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
TNFRSF1A-207ENST00000535958 CRPP02741 224 aa8.52□□□□□ -1.05
TNFRSF1A-207ENST00000535958 STAG3L2P0CL84 134 aa8.52□□□□□ -1.05
TNFRSF1A-207ENST00000535958 STAG3L3P0CL85 134 aa8.52□□□□□ -1.05
TNFRSF1A-207ENST00000535958 LINC00694P0DN24 101 aa8.52□□□□□ -1.05
TNFRSF1A-207ENST00000535958 GCHFRP30047 84 aa8.52□□□□□ -1.05
TNFRSF1A-207ENST00000535958 SUMO1P63165 101 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-207ENST00000535958 OR2G3Q8NGZ4 309 aa8.52□□□□□ -1.05
TNFRSF1A-207ENST00000535958 EPDR1Q9UM22 224 aa8.52□□□□□ -1.05
TNFRSF1A-207ENST00000535958 H3BVH4 76 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 UPK1BO75841 260 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 MBP02144 154 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 Q0VG73 95 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 DMRTA1Q5VZB9 504 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 LINC00299Q6ZSB3 139 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 NIT1Q86X76 327 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 C14orf178Q8N769 122 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 HSD17B11Q8NBQ5 300 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 OR11H4Q8NGC9 324 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 CIRBP-AS1Q8TBR5 109 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 RAB24Q969Q5 203 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 CHCHD7Q9BUK0 85 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 SAMD10Q9BYL1 202 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 WFDC1Q9HC57 220 aa8.51□□□□□ -1.05
TNFRSF1A-207ENST00000535958 RNF222A6NCQ9 220 aa8.5□□□□□ -1.05
TNFRSF1A-207ENST00000535958 FABP5P3A8MUU1 101 aa8.5□□□□□ -1.05
TNFRSF1A-207ENST00000535958 B4DEV8 164 aa8.5□□□□□ -1.05
TNFRSF1A-207ENST00000535958 CXorf1O96002 111 aa8.5□□□□□ -1.05
TNFRSF1A-207ENST00000535958 IFNA7P01567 189 aa8.5□□□□□ -1.05
TNFRSF1A-207ENST00000535958 IGLV2-8P01709 118 aa8.5□□□□□ -1.05
TNFRSF1A-207ENST00000535958 LINC00479Q96M42 142 aa8.5□□□□□ -1.05
TNFRSF1A-207ENST00000535958 C1orf43Q9BWL3 253 aa8.5□□□□□ -1.05
TNFRSF1A-207ENST00000535958 IL36BQ9NZH7 164 aa8.5□□□□□ -1.05
TNFRSF1A-207ENST00000535958 IGKV3D-20A0A0C4DH25 116 aa8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 DEFA1P59665 94 aa8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 DEFA3P59666 94 aa8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 RPL37AP61513 92 aaKnown RBP8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 RPL36AP83881 106 aaKnown RBP8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 RPL36ALQ969Q0 106 aaKnown RBP8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 PSMG3Q9BT73 122 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 ACTR3CQ9C0K3 210 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 JPT2Q9H910 190 aa8.49□□□□□ -1.05
TNFRSF1A-207ENST00000535958 PHLDA3Q9Y5J5 127 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms