RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	SPINK9	Q5DT21	86 aa		10.52	□□□□□ -0.72
POLE-208	ENST00000535934	FAM110A	Q9BQ89	295 aa		10.52	□□□□□ -0.72
POLE-208	ENST00000535934	C21orf62	Q9NYP8	219 aa		10.52	□□□□□ -0.72
POLE-208	ENST00000535934		A0A1W2PPM0	123 aa		10.52	□□□□□ -0.73
POLE-208	ENST00000535934	IGHV3-48	P01763	117 aa		10.52	□□□□□ -0.73
POLE-208	ENST00000535934	CTSG	P08311	255 aa		10.52	□□□□□ -0.73
POLE-208	ENST00000535934	CT45A10	P0DMU9	189 aa		10.52	□□□□□ -0.73
POLE-208	ENST00000535934	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.52	□□□□□ -0.73
POLE-208	ENST00000535934	C2orf91	Q6ZV80	131 aa		10.52	□□□□□ -0.73
POLE-208	ENST00000535934	RPP21	Q9H633	154 aa	Known RBP	10.52	□□□□□ -0.73
POLE-208	ENST00000535934	SPCS1	Q9Y6A9	102 aa		10.52	□□□□□ -0.73
POLE-208	ENST00000535934	RYR2	Q92736	4967 aa		10.51	□□□□□ -0.73
POLE-208	ENST00000535934	GDF5OS	Q5U4N7	250 aa		10.51	□□□□□ -0.73
POLE-208	ENST00000535934	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.51	□□□□□ -0.73
POLE-208	ENST00000535934	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.5	□□□□□ -0.73
POLE-208	ENST00000535934		I3L2K1	104 aa		10.5	□□□□□ -0.73
POLE-208	ENST00000535934	CHEK1	O14757	476 aa		10.5	□□□□□ -0.73
POLE-208	ENST00000535934	CAMP	P49913	170 aa		10.5	□□□□□ -0.73
POLE-208	ENST00000535934	UBE2L3	P68036	154 aa	Known RBP	10.5	□□□□□ -0.73
POLE-208	ENST00000535934	PRCD	Q00LT1	54 aa		10.5	□□□□□ -0.73
POLE-208	ENST00000535934	BOD1L2	Q8IYS8	172 aa		10.5	□□□□□ -0.73
POLE-208	ENST00000535934	URB1-AS1	Q96HZ7	61 aa		10.5	□□□□□ -0.73
POLE-208	ENST00000535934	LYST	Q99698	3801 aa		10.5	□□□□□ -0.73
POLE-208	ENST00000535934	UFC1	Q9Y3C8	167 aa		10.5	□□□□□ -0.73
POLE-208	ENST00000535934		H3BUT2	72 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	KIR3DS1	Q14943	382 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	LGALS9B	Q3B8N2	356 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	C2orf83	Q53S99	150 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	LGALS9C	Q6DKI2	356 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	ERAS	Q7Z444	233 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	BLNK	Q8WV28	456 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	ZNF503	Q96F45	646 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	GPR82	Q96P67	336 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	KLF12	Q9Y4X4	402 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	SACS	Q9NZJ4	4579 aa		10.49	□□□□□ -0.73
POLE-208	ENST00000535934	PRSS47	A8MTI9	375 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934		F8W1H4	67 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934	NDUFA4	O00483	81 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934	FOXI2	Q6ZQN5	318 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934	GATD1	Q8NB37	220 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934	DAZAP1	Q96EP5	407 aa	Known RBP	10.48	□□□□□ -0.73
POLE-208	ENST00000535934	FMC1	Q96HJ9	113 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934	DAZ1	Q9NQZ3	744 aa	Known RBP	10.48	□□□□□ -0.73
POLE-208	ENST00000535934	AP5S1	Q9NUS5	200 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934	TRAV25	A0A0B4J276	109 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934	SMIM13	P0DJ93	91 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934	AZU1	P20160	251 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934	LINC01559	Q495D7	138 aa		10.48	□□□□□ -0.73
POLE-208	ENST00000535934		P01737	135 aa		10.47	□□□□□ -0.73
POLE-208	ENST00000535934	PAXX	Q9BUH6	204 aa		10.47	□□□□□ -0.73
POLE-208	ENST00000535934	HIGD1B	Q9P298	99 aa		10.47	□□□□□ -0.73
POLE-208	ENST00000535934	IGHV3-49	A0A0A0MS15	119 aa		10.46	□□□□□ -0.74
POLE-208	ENST00000535934		K7EMT4	169 aa		10.46	□□□□□ -0.74
POLE-208	ENST00000535934	GNG7	O60262	68 aa		10.46	□□□□□ -0.74
POLE-208	ENST00000535934	CA1	P00915	261 aa	Predicted RBP	10.46	□□□□□ -0.74
POLE-208	ENST00000535934	FGF6	P10767	208 aa		10.46	□□□□□ -0.74
POLE-208	ENST00000535934	FCGR2B	P31994	310 aa	Predicted RBP	10.46	□□□□□ -0.74
POLE-208	ENST00000535934	RIG	Q13278	110 aa		10.46	□□□□□ -0.74
POLE-208	ENST00000535934		Q6AWC8	147 aa		10.46	□□□□□ -0.74
POLE-208	ENST00000535934	MFAP4	P55083	255 aa		10.45	□□□□□ -0.74
POLE-208	ENST00000535934	ODF3L2	Q3SX64	289 aa		10.45	□□□□□ -0.74
POLE-208	ENST00000535934	FAM167A-AS1	Q96KT0	104 aa		10.45	□□□□□ -0.74
POLE-208	ENST00000535934	SPAG8	Q99932	426 aa	Predicted RBP	10.45	□□□□□ -0.74
POLE-208	ENST00000535934	MRPL36	Q9P0J6	103 aa	Known RBP	10.45	□□□□□ -0.74
POLE-208	ENST00000535934	RABAC1	Q9UI14	185 aa		10.45	□□□□□ -0.74
POLE-208	ENST00000535934	IGHV3OR16-13	A0A075B7E8	117 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	IGHV3-74	A0A0B4J1X5	117 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	GAGE12H	A6NDE8	117 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	INS-IGF2	F8WCM5	200 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	COX7A2P2	O60397	106 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	FOXA3	P55318	350 aa	Predicted RBP	10.44	□□□□□ -0.74
POLE-208	ENST00000535934	RPL24	P83731	157 aa	Known RBP	10.44	□□□□□ -0.74
POLE-208	ENST00000535934	ERH	P84090	104 aa	Known RBP	10.44	□□□□□ -0.74
POLE-208	ENST00000535934	MLANA	Q16655	118 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	PVRIG	Q6DKI7	326 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	MRAP2	Q96G30	205 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	OVOL2	Q9BRP0	275 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	MLST8	Q9BVC4	326 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	RHPN1-AS1	Q9BWJ2	59 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	SLC25A2	Q9BXI2	301 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	EPDR1	Q9UM22	224 aa		10.44	□□□□□ -0.74
POLE-208	ENST00000535934	TRBV6-1	A0A0K0K1D8	114 aa		10.43	□□□□□ -0.74
POLE-208	ENST00000535934	LCE6A	A0A183	80 aa		10.43	□□□□□ -0.74
POLE-208	ENST00000535934	RNASE2	P10153	161 aa	Known RBP	10.43	□□□□□ -0.74
POLE-208	ENST00000535934	SUB1	P53999	127 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
POLE-208	ENST00000535934	C10orf113	Q5VZT2	155 aa		10.43	□□□□□ -0.74
POLE-208	ENST00000535934	VGLL1	Q99990	258 aa		10.43	□□□□□ -0.74
POLE-208	ENST00000535934	IGHV7-4-1	A0A0J9YVY3	117 aa		10.43	□□□□□ -0.74
POLE-208	ENST00000535934	C19orf71	A6NCJ1	209 aa		10.43	□□□□□ -0.74
POLE-208	ENST00000535934	NPIPB6	E9PJ23	425 aa		10.43	□□□□□ -0.74
POLE-208	ENST00000535934	APOH	P02749	345 aa	Predicted RBP	10.43	□□□□□ -0.74
POLE-208	ENST00000535934	CKS1B	P61024	79 aa		10.43	□□□□□ -0.74
POLE-208	ENST00000535934	VCX2	Q9H322	139 aa		10.43	□□□□□ -0.74
POLE-208	ENST00000535934	HLA-DRB4	P13762	266 aa		10.42	□□□□□ -0.74
POLE-208	ENST00000535934	LINC00173	Q6ZV60	143 aa		10.42	□□□□□ -0.74
POLE-208	ENST00000535934	TMEM116	Q8NCL8	245 aa		10.42	□□□□□ -0.74
POLE-208	ENST00000535934	PRSS3P2	Q8NHM4	247 aa		10.42	□□□□□ -0.74
POLE-208	ENST00000535934	HLA-DRB4	X5D2U9	266 aa		10.42	□□□□□ -0.74
POLE-208	ENST00000535934	LTA	P01374	205 aa		10.41	□□□□□ -0.74
POLE-208	ENST00000535934	C16orf54	Q6UWD8	224 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms