RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 SH3BGRL3Q9H299 93 aa11.21□□□□□ -0.61
CAPRIN1-216ENST00000534042 STAG3L2P0CL84 134 aa11.2□□□□□ -0.62
CAPRIN1-216ENST00000534042 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
CAPRIN1-216ENST00000534042 RNASE3P12724 160 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-216ENST00000534042 FLI1Q01543 452 aaPredicted RBP11.2□□□□□ -0.62
CAPRIN1-216ENST00000534042 PRNTQ86SH4 94 aa11.2□□□□□ -0.62
CAPRIN1-216ENST00000534042 MYCBP2O75592 4640 aa11.2□□□□□ -0.62
CAPRIN1-216ENST00000534042 TRAV8-3A0A0A6YYJ7 113 aa11.19□□□□□ -0.62
CAPRIN1-216ENST00000534042 PLA2G1BP04054 148 aaKnown RBP11.19□□□□□ -0.62
CAPRIN1-216ENST00000534042 GCHFRP30047 84 aa11.19□□□□□ -0.62
CAPRIN1-216ENST00000534042 SUMO1P63165 101 aaKnown RBP11.19□□□□□ -0.62
CAPRIN1-216ENST00000534042 WFDC2Q14508 124 aa11.19□□□□□ -0.62
CAPRIN1-216ENST00000534042 RAB24Q969Q5 203 aa11.19□□□□□ -0.62
CAPRIN1-216ENST00000534042 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 IGLV2-11P01706 119 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 DEFA1P59665 94 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 DEFA3P59666 94 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 GAGE1Q13065 139 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 GAGE4Q13068 117 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 GAGE5Q13069 117 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 GAGE13Q4V321 117 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 Q8N3U1 123 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 CYB561D1Q8N8Q1 229 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 HSD17B11Q8NBQ5 300 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 OR2G3Q8NGZ4 309 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 SUN5Q8TC36 379 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 PARLQ9H300 379 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 EPDR1Q9UM22 224 aa11.18□□□□□ -0.62
CAPRIN1-216ENST00000534042 A8MWV9 139 aa11.17□□□□□ -0.62
CAPRIN1-216ENST00000534042 S100A4P26447 101 aaKnown RBP11.17□□□□□ -0.62
CAPRIN1-216ENST00000534042 LGALSLQ3ZCW2 172 aaPredicted RBP11.17□□□□□ -0.62
CAPRIN1-216ENST00000534042 TOR2AQ5JU69 321 aa11.17□□□□□ -0.62
CAPRIN1-216ENST00000534042 SAPCD1Q5SSQ6 148 aa11.17□□□□□ -0.62
CAPRIN1-216ENST00000534042 ZFP2Q6ZN57 461 aa11.17□□□□□ -0.62
CAPRIN1-216ENST00000534042 TMEM167BQ9NRX6 74 aa11.17□□□□□ -0.62
CAPRIN1-216ENST00000534042 GGTLC3B5MD39 225 aa11.16□□□□□ -0.62
CAPRIN1-216ENST00000534042 LECT2O14960 151 aa11.16□□□□□ -0.62
CAPRIN1-216ENST00000534042 DAZ4Q86SG3 579 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-216ENST00000534042 PSMG3Q9BT73 122 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-216ENST00000534042 DAZ3Q9NR90 486 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-216ENST00000534042 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.15□□□□□ -0.62
CAPRIN1-216ENST00000534042 CXorf1O96002 111 aa11.15□□□□□ -0.62
CAPRIN1-216ENST00000534042 MBP02144 154 aa11.15□□□□□ -0.62
CAPRIN1-216ENST00000534042 LINC00694P0DN24 101 aa11.15□□□□□ -0.62
CAPRIN1-216ENST00000534042 PIK3CD-AS1Q5SR53 167 aa11.15□□□□□ -0.62
CAPRIN1-216ENST00000534042 Q6ZSA8 131 aa11.15□□□□□ -0.62
CAPRIN1-216ENST00000534042 LINC00528Q8N1L1 170 aa11.15□□□□□ -0.62
CAPRIN1-216ENST00000534042 OR2T35Q8NGX2 323 aa11.15□□□□□ -0.62
CAPRIN1-216ENST00000534042 A0A087WWC5 75 aa11.14□□□□□ -0.63
CAPRIN1-216ENST00000534042 IGKV3D-20A0A0C4DH25 116 aa11.14□□□□□ -0.63
CAPRIN1-216ENST00000534042 ATP6V0CP27449 155 aa11.14□□□□□ -0.63
CAPRIN1-216ENST00000534042 ASIPP42127 132 aa11.14□□□□□ -0.63
CAPRIN1-216ENST00000534042 FGF8P55075 233 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-216ENST00000534042 SERF2P84101 59 aa11.14□□□□□ -0.63
CAPRIN1-216ENST00000534042 ACTR3CQ9C0K3 210 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-216ENST00000534042 COX11Q9Y6N1 276 aa11.14□□□□□ -0.63
CAPRIN1-216ENST00000534042 TRAV34A0A0B4J273 112 aa11.13□□□□□ -0.63
CAPRIN1-216ENST00000534042 FABP5P3A8MUU1 101 aa11.13□□□□□ -0.63
CAPRIN1-216ENST00000534042 BAALCQ8WXS3 180 aa11.13□□□□□ -0.63
CAPRIN1-216ENST00000534042 RMI2Q96E14 147 aa11.13□□□□□ -0.63
CAPRIN1-216ENST00000534042 SAMD10Q9BYL1 202 aa11.13□□□□□ -0.63
CAPRIN1-216ENST00000534042 JPT2Q9H910 190 aa11.13□□□□□ -0.63
CAPRIN1-216ENST00000534042 A0A1W2PRE2 83 aa11.12□□□□□ -0.63
CAPRIN1-216ENST00000534042 C14orf178Q8N769 122 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-216ENST00000534042 DEFB104AQ8WTQ1 72 aa11.12□□□□□ -0.63
CAPRIN1-216ENST00000534042 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
CAPRIN1-216ENST00000534042 IL36BQ9NZH7 164 aa11.12□□□□□ -0.63
CAPRIN1-216ENST00000534042 Q9UF83 564 aa11.12□□□□□ -0.63
CAPRIN1-216ENST00000534042 TNFSF18Q9UNG2 199 aa11.12□□□□□ -0.63
CAPRIN1-216ENST00000534042 URGCP-MRPS24S4R325 110 aa11.12□□□□□ -0.63
CAPRIN1-216ENST00000534042 ARL2-SNX15V9GYD0 113 aa11.12□□□□□ -0.63
CAPRIN1-216ENST00000534042 SEC11BP0C7V7 166 aa11.11□□□□□ -0.63
CAPRIN1-216ENST00000534042 UFSP1Q6NVU6 142 aa11.11□□□□□ -0.63
CAPRIN1-216ENST00000534042 AQP10Q96PS8 301 aa11.11□□□□□ -0.63
CAPRIN1-216ENST00000534042 RBFOX3A6NFN3 312 aa11.1□□□□□ -0.63
CAPRIN1-216ENST00000534042 KRTAP29-1A8MX34 341 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-216ENST00000534042 H3BVH4 76 aa11.1□□□□□ -0.63
CAPRIN1-216ENST00000534042 RHODO00212 210 aa11.1□□□□□ -0.63
CAPRIN1-216ENST00000534042 IFNA7P01567 189 aa11.1□□□□□ -0.63
CAPRIN1-216ENST00000534042 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
CAPRIN1-216ENST00000534042 DMRTA1Q5VZB9 504 aa11.1□□□□□ -0.63
CAPRIN1-216ENST00000534042 Q8N976 141 aa11.1□□□□□ -0.63
CAPRIN1-216ENST00000534042 SYT8Q8NBV8 401 aa11.1□□□□□ -0.63
CAPRIN1-216ENST00000534042 ALG5Q9Y673 324 aa11.1□□□□□ -0.63
CAPRIN1-216ENST00000534042 IGKV2D-24A0A075B6R9 120 aa11.09□□□□□ -0.63
CAPRIN1-216ENST00000534042 B4DEV8 164 aa11.09□□□□□ -0.63
CAPRIN1-216ENST00000534042 NIT1Q86X76 327 aa11.09□□□□□ -0.63
CAPRIN1-216ENST00000534042 ARMS2P0C7Q2 107 aa11.08□□□□□ -0.64
CAPRIN1-216ENST00000534042 FAM74A4Q5TZK3 123 aa11.08□□□□□ -0.64
CAPRIN1-216ENST00000534042 SCXQ7RTU7 201 aa11.08□□□□□ -0.64
CAPRIN1-216ENST00000534042 OR11H4Q8NGC9 324 aa11.08□□□□□ -0.64
CAPRIN1-216ENST00000534042 KLK12Q9UKR0 248 aa11.08□□□□□ -0.64
CAPRIN1-216ENST00000534042 RNF222A6NCQ9 220 aa11.07□□□□□ -0.64
CAPRIN1-216ENST00000534042 A6NHS1 94 aa11.07□□□□□ -0.64
CAPRIN1-216ENST00000534042 M0R036 132 aa11.07□□□□□ -0.64
CAPRIN1-216ENST00000534042 PEX7O00628 323 aa11.07□□□□□ -0.64
CAPRIN1-216ENST00000534042 UBE2G2P60604 165 aa11.07□□□□□ -0.64
CAPRIN1-216ENST00000534042 DNLZQ5SXM8 178 aa11.07□□□□□ -0.64
CAPRIN1-216ENST00000534042 Q86TA4 180 aa11.07□□□□□ -0.64
CAPRIN1-216ENST00000534042 DNAJC30Q96LL9 226 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms