RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ZNF674Q2M3X9 581 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 SOHLH1Q5JUK2 328 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 ZNF506Q5JVG8 444 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 KMT2AQ03164 3969 aa9.3□□□□□ -0.92
CAPN1-227ENST00000533909 VPS13DQ5THJ4 4388 aa9.29□□□□□ -0.92
CAPN1-227ENST00000533909 CIDEAO60543 219 aa9.29□□□□□ -0.92
CAPN1-227ENST00000533909 RNASE3P12724 160 aaKnown RBP9.29□□□□□ -0.92
CAPN1-227ENST00000533909 GYPEP15421 78 aa9.29□□□□□ -0.92
CAPN1-227ENST00000533909 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
CAPN1-227ENST00000533909 MED9Q9NWA0 146 aa9.29□□□□□ -0.92
CAPN1-227ENST00000533909 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
CAPN1-227ENST00000533909 VAX2Q9UIW0 290 aa9.29□□□□□ -0.92
CAPN1-227ENST00000533909 PHLDA3Q9Y5J5 127 aa9.29□□□□□ -0.92
CAPN1-227ENST00000533909 NACAE9PAV3 2078 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 IGHV3-73A0A0B4J1V6 119 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 PGPEP1LA6NFU8 196 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 RS1O15537 224 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 ARMS2P0C7Q2 107 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 MGST1P10620 155 aaKnown RBP9.28□□□□□ -0.92
CAPN1-227ENST00000533909 GNG4P50150 75 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 ESRGQ1W209 222 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 CENPWQ5EE01 88 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 CFAP126Q5VTH2 177 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 NEGR1Q7Z3B1 354 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 ZNRF2Q8NHG8 242 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 PTH2Q96A98 100 aa9.28□□□□□ -0.92
CAPN1-227ENST00000533909 MRPS16Q9Y3D3 137 aaKnown RBP9.28□□□□□ -0.92
CAPN1-227ENST00000533909 NBDYA0A0U1RRE5 68 aa9.27□□□□□ -0.93
CAPN1-227ENST00000533909 A8MWV9 139 aa9.27□□□□□ -0.93
CAPN1-227ENST00000533909 DAZAP1Q96EP5 407 aaKnown RBP9.27□□□□□ -0.93
CAPN1-227ENST00000533909 PRADC1Q9BSG0 188 aa9.27□□□□□ -0.93
CAPN1-227ENST00000533909 DERL1Q9BUN8 251 aa9.27□□□□□ -0.93
CAPN1-227ENST00000533909 Q9H8V8 135 aa9.27□□□□□ -0.93
CAPN1-227ENST00000533909 K7EQD1 137 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 M0R381 172 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 GATA1P15976 413 aaPredicted RBP9.26□□□□□ -0.93
CAPN1-227ENST00000533909 RHOHQ15669 191 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 TTC32Q5I0X7 151 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 PIK3CD-AS1Q5SR53 167 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 C1orf134Q5TEV5 83 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 SH2D6Q7Z4S9 175 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 ZFP82Q8N141 532 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 MLST8Q9BVC4 326 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 BOLA1Q9Y3E2 137 aa9.26□□□□□ -0.93
CAPN1-227ENST00000533909 DNLZQ5SXM8 178 aa9.25□□□□□ -0.93
CAPN1-227ENST00000533909 Q6ZR54 194 aa9.25□□□□□ -0.93
CAPN1-227ENST00000533909 UPK3BQ9BT76 320 aa9.25□□□□□ -0.93
CAPN1-227ENST00000533909 BIN3Q9NQY0 253 aa9.25□□□□□ -0.93
CAPN1-227ENST00000533909 TRBV6-4A0A1B0GX49 114 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 RAB19A4D1S5 217 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 RHODO00212 210 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 NXPH4O95158 308 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 RPL19P84098 196 aaKnown RBP9.24□□□□□ -0.93
CAPN1-227ENST00000533909 FAM74A4Q5TZK3 123 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 DMRTA1Q5VZB9 504 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 LYPD5Q6UWN5 251 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 ZFP2Q6ZN57 461 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 SLC25A29Q8N8R3 303 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 SMIM12Q96EX1 92 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 PARLQ9H300 379 aa9.24□□□□□ -0.93
CAPN1-227ENST00000533909 RBFOX3A6NFN3 312 aa9.23□□□□□ -0.93
CAPN1-227ENST00000533909 SIVA1O15304 175 aa9.23□□□□□ -0.93
CAPN1-227ENST00000533909 CEBPGP53567 150 aa9.23□□□□□ -0.93
CAPN1-227ENST00000533909 LOC100131303A0A0U1RQF7 123 aa9.22□□□□□ -0.93
CAPN1-227ENST00000533909 XKRY2A2RUG3 117 aa9.22□□□□□ -0.93
CAPN1-227ENST00000533909 PRSS29PA6NIE9 313 aa9.22□□□□□ -0.93
CAPN1-227ENST00000533909 CXCL1P09341 107 aa9.22□□□□□ -0.93
CAPN1-227ENST00000533909 MED14OSP0DP75 135 aa9.22□□□□□ -0.93
CAPN1-227ENST00000533909 RPS20P60866 119 aaKnown RBP9.22□□□□□ -0.93
CAPN1-227ENST00000533909 SPANXN1Q5VSR9 72 aa9.22□□□□□ -0.93
CAPN1-227ENST00000533909 C6orf223Q8N319 242 aa9.22□□□□□ -0.93
CAPN1-227ENST00000533909 TPPP3Q9BW30 176 aa9.22□□□□□ -0.93
CAPN1-227ENST00000533909 EIF5A2Q9GZV4 153 aaKnown RBP9.22□□□□□ -0.93
CAPN1-227ENST00000533909 SCRT2Q9NQ03 307 aa9.22□□□□□ -0.93
CAPN1-227ENST00000533909 DNAH6Q9C0G6 4158 aa9.22□□□□□ -0.93
CAPN1-227ENST00000533909 A0A087WWL8 130 aa9.21□□□□□ -0.94
CAPN1-227ENST00000533909 P01737 135 aa9.21□□□□□ -0.94
CAPN1-227ENST00000533909 SSTP61278 116 aa9.21□□□□□ -0.94
CAPN1-227ENST00000533909 OR2D3Q8NGH3 330 aa9.21□□□□□ -0.94
CAPN1-227ENST00000533909 SFRP2Q96HF1 295 aa9.21□□□□□ -0.94
CAPN1-227ENST00000533909 JPT2Q9H910 190 aa9.21□□□□□ -0.94
CAPN1-227ENST00000533909 TRAV9-2A0A087WT02 112 aa9.2□□□□□ -0.94
CAPN1-227ENST00000533909 A0A1W2PPQ1 181 aa9.2□□□□□ -0.94
CAPN1-227ENST00000533909 TMEM250H0YL14 139 aa9.2□□□□□ -0.94
CAPN1-227ENST00000533909 RTL8CO15255 209 aa9.2□□□□□ -0.94
CAPN1-227ENST00000533909 TOR2AQ5JU69 321 aa9.2□□□□□ -0.94
CAPN1-227ENST00000533909 EPPK1P58107 5090 aaKnown RBP9.2□□□□□ -0.94
CAPN1-227ENST00000533909 TRAV8-6A0A0B4J262 113 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 MUC21A0A0G2JKD1 596 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 MUC21A0A140T8X8 626 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 GAGE12JA6NER3 117 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 IGLV2-8P01709 118 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 SMIM17P0DL12 118 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 GAGE1Q13065 139 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 GAGE4Q13068 117 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 GAGE5Q13069 117 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 GAGE13Q4V321 117 aa9.19□□□□□ -0.94
CAPN1-227ENST00000533909 OR10AG1Q8NH19 301 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms