RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 Q6ZR54 194 aa10.98□□□□□ -0.65
TSKU-204ENST00000533752 LINC00336Q6ZUF6 198 aa10.98□□□□□ -0.65
TSKU-204ENST00000533752 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
TSKU-204ENST00000533752 UPK3BQ9BT76 320 aa10.98□□□□□ -0.65
TSKU-204ENST00000533752 MRPS16Q9Y3D3 137 aaKnown RBP10.98□□□□□ -0.65
TSKU-204ENST00000533752 M0R036 132 aa10.97□□□□□ -0.65
TSKU-204ENST00000533752 BCL2P10415 239 aa10.97□□□□□ -0.65
TSKU-204ENST00000533752 RPL35P42766 123 aaKnown RBP10.97□□□□□ -0.65
TSKU-204ENST00000533752 SOHLH1Q5JUK2 328 aa10.97□□□□□ -0.65
TSKU-204ENST00000533752 ZNF506Q5JVG8 444 aa10.97□□□□□ -0.65
TSKU-204ENST00000533752 NHLRC2Q8NBF2 726 aa10.97□□□□□ -0.65
TSKU-204ENST00000533752 SYT8Q8NBV8 401 aa10.97□□□□□ -0.65
TSKU-204ENST00000533752 A8MWV9 139 aa10.96□□□□□ -0.65
TSKU-204ENST00000533752 H3BVH4 76 aa10.96□□□□□ -0.65
TSKU-204ENST00000533752 RS1O15537 224 aa10.96□□□□□ -0.65
TSKU-204ENST00000533752 SRIP30626 198 aa10.96□□□□□ -0.65
TSKU-204ENST00000533752 BLOC1S1P78537 153 aa10.96□□□□□ -0.65
TSKU-204ENST00000533752 ESRGQ1W209 222 aa10.96□□□□□ -0.65
TSKU-204ENST00000533752 CFAP126Q5VTH2 177 aa10.96□□□□□ -0.65
TSKU-204ENST00000533752 MLST8Q9BVC4 326 aa10.96□□□□□ -0.65
TSKU-204ENST00000533752 VAX2Q9UIW0 290 aa10.96□□□□□ -0.65
TSKU-204ENST00000533752 NBDYA0A0U1RRE5 68 aa10.95□□□□□ -0.66
TSKU-204ENST00000533752 PGPEP1LA6NFU8 196 aa10.95□□□□□ -0.66
TSKU-204ENST00000533752 GYPEP15421 78 aa10.95□□□□□ -0.66
TSKU-204ENST00000533752 GATA1P15976 413 aaPredicted RBP10.95□□□□□ -0.66
TSKU-204ENST00000533752 TTC32Q5I0X7 151 aa10.95□□□□□ -0.66
TSKU-204ENST00000533752 ALKAL2Q6UX46 152 aa10.95□□□□□ -0.66
TSKU-204ENST00000533752 NEGR1Q7Z3B1 354 aa10.95□□□□□ -0.66
TSKU-204ENST00000533752 SH2D6Q7Z4S9 175 aa10.95□□□□□ -0.66
TSKU-204ENST00000533752 SMIM12Q96EX1 92 aa10.95□□□□□ -0.66
TSKU-204ENST00000533752 K7EQD1 137 aa10.94□□□□□ -0.66
TSKU-204ENST00000533752 CXCL1P09341 107 aa10.94□□□□□ -0.66
TSKU-204ENST00000533752 MGST1P10620 155 aaKnown RBP10.94□□□□□ -0.66
TSKU-204ENST00000533752 RHOHQ15669 191 aa10.94□□□□□ -0.66
TSKU-204ENST00000533752 CENPWQ5EE01 88 aa10.94□□□□□ -0.66
TSKU-204ENST00000533752 Q9H8V8 135 aa10.94□□□□□ -0.66
TSKU-204ENST00000533752 PHLDA3Q9Y5J5 127 aa10.94□□□□□ -0.66
TSKU-204ENST00000533752 TRBV6-4A0A1B0GX49 114 aa10.93□□□□□ -0.66
TSKU-204ENST00000533752 ARMS2P0C7Q2 107 aa10.93□□□□□ -0.66
TSKU-204ENST00000533752 MED14OSP0DP75 135 aa10.93□□□□□ -0.66
TSKU-204ENST00000533752 NKX2-5P52952 324 aaPredicted RBP10.93□□□□□ -0.66
TSKU-204ENST00000533752 ZFP2Q6ZN57 461 aa10.93□□□□□ -0.66
TSKU-204ENST00000533752 ZFP82Q8N141 532 aa10.93□□□□□ -0.66
TSKU-204ENST00000533752 PRADC1Q9BSG0 188 aa10.93□□□□□ -0.66
TSKU-204ENST00000533752 DERL1Q9BUN8 251 aa10.93□□□□□ -0.66
TSKU-204ENST00000533752 TMSB15BA0A087X1C1 80 aa10.92□□□□□ -0.66
TSKU-204ENST00000533752 GRIFINA4D1Z8 144 aa10.92□□□□□ -0.66
TSKU-204ENST00000533752 RHODO00212 210 aa10.92□□□□□ -0.66
TSKU-204ENST00000533752 GNG4P50150 75 aa10.92□□□□□ -0.66
TSKU-204ENST00000533752 C1orf134Q5TEV5 83 aa10.92□□□□□ -0.66
TSKU-204ENST00000533752 PRR27Q6MZM9 219 aa10.92□□□□□ -0.66
TSKU-204ENST00000533752 PARLQ9H300 379 aa10.92□□□□□ -0.66
TSKU-204ENST00000533752 SCRT2Q9NQ03 307 aa10.92□□□□□ -0.66
TSKU-204ENST00000533752 BIN3Q9NQY0 253 aa10.92□□□□□ -0.66
TSKU-204ENST00000533752 MED9Q9NWA0 146 aa10.92□□□□□ -0.66
TSKU-204ENST00000533752 A0A1W2PPQ1 181 aa10.91□□□□□ -0.66
TSKU-204ENST00000533752 DNAH10Q8IVF4 4471 aa10.9□□□□□ -0.66
TSKU-204ENST00000533752 NXPH4O95158 308 aa10.9□□□□□ -0.66
TSKU-204ENST00000533752 LYPD5Q6UWN5 251 aa10.9□□□□□ -0.66
TSKU-204ENST00000533752 SLC25A29Q8N8R3 303 aa10.9□□□□□ -0.66
TSKU-204ENST00000533752 LYPD6BQ8NI32 183 aa10.9□□□□□ -0.66
TSKU-204ENST00000533752 FRAS1Q86XX4 4008 aa10.89□□□□□ -0.67
TSKU-204ENST00000533752 IGHV3-73A0A0B4J1V6 119 aa10.89□□□□□ -0.67
TSKU-204ENST00000533752 RTL8CO15255 209 aa10.89□□□□□ -0.67
TSKU-204ENST00000533752 SIVA1O15304 175 aa10.89□□□□□ -0.67
TSKU-204ENST00000533752 BTF3P20290 206 aaKnown RBP10.89□□□□□ -0.67
TSKU-204ENST00000533752 DMRTA1Q5VZB9 504 aa10.89□□□□□ -0.67
TSKU-204ENST00000533752 DAZAP1Q96EP5 407 aaKnown RBP10.89□□□□□ -0.67
TSKU-204ENST00000533752 BOLA1Q9Y3E2 137 aa10.89□□□□□ -0.67
TSKU-204ENST00000533752 PRSS29PA6NIE9 313 aa10.88□□□□□ -0.67
TSKU-204ENST00000533752 M0R381 172 aa10.88□□□□□ -0.67
TSKU-204ENST00000533752 TIRAPP58753 221 aa10.88□□□□□ -0.67
TSKU-204ENST00000533752 RPL19P84098 196 aaKnown RBP10.88□□□□□ -0.67
TSKU-204ENST00000533752 ZNF575Q86XF7 245 aa10.88□□□□□ -0.67
TSKU-204ENST00000533752 C6orf223Q8N319 242 aa10.88□□□□□ -0.67
TSKU-204ENST00000533752 LOC100131303A0A0U1RQF7 123 aa10.87□□□□□ -0.67
TSKU-204ENST00000533752 XKRY2A2RUG3 117 aa10.87□□□□□ -0.67
TSKU-204ENST00000533752 RAB19A4D1S5 217 aa10.87□□□□□ -0.67
TSKU-204ENST00000533752 RBFOX3A6NFN3 312 aa10.87□□□□□ -0.67
TSKU-204ENST00000533752 TMEM250H0YL14 139 aa10.87□□□□□ -0.67
TSKU-204ENST00000533752 IGLV2-8P01709 118 aa10.87□□□□□ -0.67
TSKU-204ENST00000533752 OR5AL1P0C617 328 aa10.87□□□□□ -0.67
TSKU-204ENST00000533752 RPS20P60866 119 aaKnown RBP10.87□□□□□ -0.67
TSKU-204ENST00000533752 SFRP2Q96HF1 295 aa10.87□□□□□ -0.67
TSKU-204ENST00000533752 TRBV20OR9-2A0A075B6H5 130 aa10.86□□□□□ -0.67
TSKU-204ENST00000533752 K7EP13 123 aa10.86□□□□□ -0.67
TSKU-204ENST00000533752 SNAI2O43623 268 aa10.86□□□□□ -0.67
TSKU-204ENST00000533752 NDUFS6O75380 124 aaKnown RBP10.86□□□□□ -0.67
TSKU-204ENST00000533752 FAM74A4Q5TZK3 123 aa10.86□□□□□ -0.67
TSKU-204ENST00000533752 UFSP1Q6NVU6 142 aa10.86□□□□□ -0.67
TSKU-204ENST00000533752 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
TSKU-204ENST00000533752 C19orf71A6NCJ1 209 aa10.85□□□□□ -0.67
TSKU-204ENST00000533752 P01737 135 aa10.85□□□□□ -0.67
TSKU-204ENST00000533752 SPANXN1Q5VSR9 72 aa10.85□□□□□ -0.67
TSKU-204ENST00000533752 JPT2Q9H910 190 aa10.85□□□□□ -0.67
TSKU-204ENST00000533752 HECTD4Q9Y4D8 3996 aa10.85□□□□□ -0.67
TSKU-204ENST00000533752 EPPK1P58107 5090 aaKnown RBP10.84□□□□□ -0.67
TSKU-204ENST00000533752 TRAV9-2A0A087WT02 112 aa10.84□□□□□ -0.67
TSKU-204ENST00000533752 OR2D3Q8NGH3 330 aa10.84□□□□□ -0.67
TSKU-204ENST00000533752 OR10AG1Q8NH19 301 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms