RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 TSSC4Q9Y5U2 329 aaPredicted RBP8.71□□□□□ -1.02
NXF1-211ENST00000531709 TRBV12-3P01733 135 aa8.7□□□□□ -1.02
NXF1-211ENST00000531709 UNQ9165/PRO28630Q6UXU0 137 aa8.7□□□□□ -1.02
NXF1-211ENST00000531709 C1orf122Q6ZSJ8 110 aa8.7□□□□□ -1.02
NXF1-211ENST00000531709 MAPKAPK5-AS1Q8N8E1 139 aa8.7□□□□□ -1.02
NXF1-211ENST00000531709 KLHL30-AS1Q8NEE0 82 aa8.7□□□□□ -1.02
NXF1-211ENST00000531709 ZNF48Q96MX3 618 aaPredicted RBP8.7□□□□□ -1.02
NXF1-211ENST00000531709 AGRNO00468 2067 aa8.7□□□□□ -1.02
NXF1-211ENST00000531709 MYMXA0A1B0GTQ4 84 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 LINC01549A6NIU2 74 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 LYRM7Q5U5X0 104 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 MRAP2Q96G30 205 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 PIMREGQ9BSJ6 248 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 TP53TG1Q9Y2A0 90 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 COL27A1Q8IZC6 1860 aaPredicted RBP8.69□□□□□ -1.02
NXF1-211ENST00000531709 RBAKDNA6NC62 111 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 PRSS29PA6NIE9 313 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 IGLL5B9A064 214 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 PPP1R17O96001 155 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 DUX5Q96PT3 197 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 HLA-DRB4P13762 266 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 HLA-DRB4X5D2U9 266 aa8.69□□□□□ -1.02
NXF1-211ENST00000531709 TRAV12-2A0A075B6T6 113 aa8.68□□□□□ -1.02
NXF1-211ENST00000531709 IGHV3-73A0A0B4J1V6 119 aa8.68□□□□□ -1.02
NXF1-211ENST00000531709 PIP4P2Q8N4L2 257 aa8.68□□□□□ -1.02
NXF1-211ENST00000531709 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
NXF1-211ENST00000531709 G3V4G9 280 aa8.68□□□□□ -1.02
NXF1-211ENST00000531709 BLCAPP62952 87 aa8.68□□□□□ -1.02
NXF1-211ENST00000531709 CCL19Q99731 98 aa8.68□□□□□ -1.02
NXF1-211ENST00000531709 SIRPDQ9H106 197 aa8.68□□□□□ -1.02
NXF1-211ENST00000531709 SNRPD3P62318 126 aaKnown RBP8.67□□□□□ -1.02
NXF1-211ENST00000531709 SYT8Q8NBV8 401 aa8.67□□□□□ -1.02
NXF1-211ENST00000531709 MYO18BQ8IUG5 2567 aa8.67□□□□□ -1.02
NXF1-211ENST00000531709 TRAV2A0A0B4J234 112 aa8.67□□□□□ -1.02
NXF1-211ENST00000531709 IGHG4P01861 327 aa8.67□□□□□ -1.02
NXF1-211ENST00000531709 TMEM238C9JI98 176 aa8.67□□□□□ -1.02
NXF1-211ENST00000531709 HHLA3Q9XRX5 114 aa8.67□□□□□ -1.02
NXF1-211ENST00000531709 FAM223BA6NKX1 122 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 DUSP14O95147 198 aaKnown RBP8.66□□□□□ -1.02
NXF1-211ENST00000531709 AZU1P20160 251 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 FAM223AQ8IWN6 122 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 GATD1Q8NB37 220 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 RAX2Q96IS3 184 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 JPT2Q9H910 190 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 POLQO75417 2590 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 SONP18583 2426 aaKnown RBP8.66□□□□□ -1.02
NXF1-211ENST00000531709 TRAV8-2A0A0B4J237 113 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 FOXI2Q6ZQN5 318 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 C5orf56Q8N8D9 126 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 HIGD1BQ9P298 99 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 KLK9Q9UKQ9 250 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 CCDC168Q8NDH2 2452 aa8.66□□□□□ -1.02
NXF1-211ENST00000531709 SDHAF1A6NFY7 115 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 DGAT2L7PQ6IED9 249 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 C9orf47Q6ZRZ4 202 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 F8W1H4 67 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 TMEM95Q3KNT9 176 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 PRR9Q5T870 116 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 C20orf173Q96LM9 149 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 DAZ1Q9NQZ3 744 aaKnown RBP8.65□□□□□ -1.02
NXF1-211ENST00000531709 IGHV1-69DA0A0B4J2H0 117 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 NDUFS8O00217 210 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 VCYO14598 125 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 IGHV1-69P01742 117 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 GNLYP22749 145 aa8.65□□□□□ -1.02
NXF1-211ENST00000531709 RPL39P62891 51 aaKnown RBP8.65□□□□□ -1.02
NXF1-211ENST00000531709 GAGE12HA6NDE8 117 aa8.65□□□□□ -1.03
NXF1-211ENST00000531709 Q5PR19 223 aa8.65□□□□□ -1.03
NXF1-211ENST00000531709 Q8N6K4 173 aa8.65□□□□□ -1.03
NXF1-211ENST00000531709 ZZEF1O43149 2961 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 IGHV3OR16-12A0A075B7B8 117 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 SPINK13Q1W4C9 94 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 RRN3P1Q2M238 152 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 FBXL19-AS1Q494R0 122 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 DLX4Q92988 240 aaPredicted RBP8.64□□□□□ -1.03
NXF1-211ENST00000531709 NDUFA4O00483 81 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 IGHV4-38-2P0DP08 117 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 NBL1P41271 181 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 VCX2Q9H322 139 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 IGHV7-4-1A0A0J9YVY3 117 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 CLPSL1A2RUU4 121 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 ZNF876PQ49A33 203 aa8.64□□□□□ -1.03
NXF1-211ENST00000531709 NPC2P61916 151 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 EBI3Q14213 229 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 PAPPA-AS1Q5QFB9 102 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 UFSP1Q6NVU6 142 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 NRACQ8N912 160 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 C20orf78Q9BR46 151 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 MAPK1IP1LQ8NDC0 245 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 BAALCQ8WXS3 180 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 RASL10AQ92737 203 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 USMG5Q96IX5 58 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 PIEZO1Q92508 2521 aa8.63□□□□□ -1.03
NXF1-211ENST00000531709 SRSF2Q01130 221 aaKnown RBP8.62□□□□□ -1.03
NXF1-211ENST00000531709 MRPL53Q96EL3 112 aaKnown RBP8.62□□□□□ -1.03
NXF1-211ENST00000531709 IGHV4-61A0A0C4DH41 118 aa8.62□□□□□ -1.03
NXF1-211ENST00000531709 A0A1W2PPR1 153 aa8.62□□□□□ -1.03
NXF1-211ENST00000531709 KNCNA6PVL3 124 aa8.62□□□□□ -1.03
NXF1-211ENST00000531709 IGHV4-39P01824 125 aa8.62□□□□□ -1.03
NXF1-211ENST00000531709 LMO4P61968 165 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 210.2 ms