RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 Q6ZR54 194 aa10.01□□□□□ -0.81
FOXR1-202ENST00000531539 DNAH6Q9C0G6 4158 aa10□□□□□ -0.81
FOXR1-202ENST00000531539 IFNA1P01562 189 aa10□□□□□ -0.81
FOXR1-202ENST00000531539 ARMS2P0C7Q2 107 aa10□□□□□ -0.81
FOXR1-202ENST00000531539 GYPEP15421 78 aa10□□□□□ -0.81
FOXR1-202ENST00000531539 CFAP126Q5VTH2 177 aa10□□□□□ -0.81
FOXR1-202ENST00000531539 PTH2Q96A98 100 aa10□□□□□ -0.81
FOXR1-202ENST00000531539 TXNDC17Q9BRA2 123 aa10□□□□□ -0.81
FOXR1-202ENST00000531539 BOLA1Q9Y3E2 137 aa10□□□□□ -0.81
FOXR1-202ENST00000531539 NBDYA0A0U1RRE5 68 aa9.99□□□□□ -0.81
FOXR1-202ENST00000531539 H3BVH4 76 aa9.99□□□□□ -0.81
FOXR1-202ENST00000531539 RPL35P42766 123 aaKnown RBP9.99□□□□□ -0.81
FOXR1-202ENST00000531539 BLOC1S1P78537 153 aa9.99□□□□□ -0.81
FOXR1-202ENST00000531539 LYPD5Q6UWN5 251 aa9.99□□□□□ -0.81
FOXR1-202ENST00000531539 PCNPQ8WW12 178 aaKnown RBP9.99□□□□□ -0.81
FOXR1-202ENST00000531539 MED9Q9NWA0 146 aa9.99□□□□□ -0.81
FOXR1-202ENST00000531539 RAB19A4D1S5 217 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 K7EQD1 137 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 GATA1P15976 413 aaPredicted RBP9.98□□□□□ -0.81
FOXR1-202ENST00000531539 SRIP30626 198 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 MEF2BQ02080 365 aaPredicted RBP9.98□□□□□ -0.81
FOXR1-202ENST00000531539 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 DNLZQ5SXM8 178 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 C1orf134Q5TEV5 83 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 PRR27Q6MZM9 219 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 NEGR1Q7Z3B1 354 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 ZNF575Q86XF7 245 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 DERL1Q9BUN8 251 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 MLST8Q9BVC4 326 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 IL36BQ9NZH7 164 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 MRPS16Q9Y3D3 137 aaKnown RBP9.98□□□□□ -0.81
FOXR1-202ENST00000531539 DNAH10Q8IVF4 4471 aa9.98□□□□□ -0.81
FOXR1-202ENST00000531539 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
FOXR1-202ENST00000531539 RTL8CO15255 209 aa9.97□□□□□ -0.81
FOXR1-202ENST00000531539 CIDEAO60543 219 aa9.97□□□□□ -0.81
FOXR1-202ENST00000531539 DMRTA1Q5VZB9 504 aa9.97□□□□□ -0.81
FOXR1-202ENST00000531539 C11orf52Q96A22 123 aa9.97□□□□□ -0.81
FOXR1-202ENST00000531539 JPT2Q9H910 190 aa9.97□□□□□ -0.81
FOXR1-202ENST00000531539 VAX2Q9UIW0 290 aa9.97□□□□□ -0.81
FOXR1-202ENST00000531539 PDE6DO43924 150 aa9.96□□□□□ -0.82
FOXR1-202ENST00000531539 BCL2P10415 239 aa9.96□□□□□ -0.82
FOXR1-202ENST00000531539 MGST1P10620 155 aaKnown RBP9.96□□□□□ -0.82
FOXR1-202ENST00000531539 RPL19P84098 196 aaKnown RBP9.96□□□□□ -0.82
FOXR1-202ENST00000531539 SOHLH1Q5JUK2 328 aa9.96□□□□□ -0.82
FOXR1-202ENST00000531539 LINC00336Q6ZUF6 198 aa9.96□□□□□ -0.82
FOXR1-202ENST00000531539 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.82
FOXR1-202ENST00000531539 SYT8Q8NBV8 401 aa9.96□□□□□ -0.82
FOXR1-202ENST00000531539 UPK3BQ9BT76 320 aa9.96□□□□□ -0.82
FOXR1-202ENST00000531539 PHLDA3Q9Y5J5 127 aa9.96□□□□□ -0.82
FOXR1-202ENST00000531539 PRSS29PA6NIE9 313 aa9.95□□□□□ -0.82
FOXR1-202ENST00000531539 A8MWV9 139 aa9.95□□□□□ -0.82
FOXR1-202ENST00000531539 DAZAP1Q96EP5 407 aaKnown RBP9.95□□□□□ -0.82
FOXR1-202ENST00000531539 PRADC1Q9BSG0 188 aa9.95□□□□□ -0.82
FOXR1-202ENST00000531539 M0R381 172 aa9.94□□□□□ -0.82
FOXR1-202ENST00000531539 NXPH4O95158 308 aa9.94□□□□□ -0.82
FOXR1-202ENST00000531539 TAGLN2P37802 199 aaKnown RBP9.94□□□□□ -0.82
FOXR1-202ENST00000531539 GNG4P50150 75 aa9.94□□□□□ -0.82
FOXR1-202ENST00000531539 CENPWQ5EE01 88 aa9.94□□□□□ -0.82
FOXR1-202ENST00000531539 PIK3CD-AS1Q5SR53 167 aa9.94□□□□□ -0.82
FOXR1-202ENST00000531539 Q6ZSN1 163 aa9.94□□□□□ -0.82
FOXR1-202ENST00000531539 SAMD10Q9BYL1 202 aa9.94□□□□□ -0.82
FOXR1-202ENST00000531539 PARLQ9H300 379 aa9.94□□□□□ -0.82
FOXR1-202ENST00000531539 BIRC6Q9NR09 4857 aa9.94□□□□□ -0.82
FOXR1-202ENST00000531539 TRBV6-4A0A1B0GX49 114 aa9.93□□□□□ -0.82
FOXR1-202ENST00000531539 RBFOX3A6NFN3 312 aa9.93□□□□□ -0.82
FOXR1-202ENST00000531539 SIVA1O15304 175 aa9.93□□□□□ -0.82
FOXR1-202ENST00000531539 IGLV2-8P01709 118 aa9.93□□□□□ -0.82
FOXR1-202ENST00000531539 ZFP2Q6ZN57 461 aa9.93□□□□□ -0.82
FOXR1-202ENST00000531539 SCRT2Q9NQ03 307 aa9.93□□□□□ -0.82
FOXR1-202ENST00000531539 A0A087WWL8 130 aa9.92□□□□□ -0.82
FOXR1-202ENST00000531539 MUC21A0A0G2JKD1 596 aa9.92□□□□□ -0.82
FOXR1-202ENST00000531539 MUC21A0A140T8X8 626 aa9.92□□□□□ -0.82
FOXR1-202ENST00000531539 SSTP61278 116 aa9.92□□□□□ -0.82
FOXR1-202ENST00000531539 RHOHQ15669 191 aa9.92□□□□□ -0.82
FOXR1-202ENST00000531539 SH2D6Q7Z4S9 175 aa9.92□□□□□ -0.82
FOXR1-202ENST00000531539 C6orf223Q8N319 242 aa9.92□□□□□ -0.82
FOXR1-202ENST00000531539 SFRP2Q96HF1 295 aa9.92□□□□□ -0.82
FOXR1-202ENST00000531539 TTC32Q5I0X7 151 aa9.91□□□□□ -0.82
FOXR1-202ENST00000531539 FAM74A4Q5TZK3 123 aa9.91□□□□□ -0.82
FOXR1-202ENST00000531539 ZFP82Q8N141 532 aa9.91□□□□□ -0.82
FOXR1-202ENST00000531539 GAGE12JA6NER3 117 aa9.9□□□□□ -0.82
FOXR1-202ENST00000531539 MED14OSP0DP75 135 aa9.9□□□□□ -0.82
FOXR1-202ENST00000531539 GAGE1Q13065 139 aa9.9□□□□□ -0.82
FOXR1-202ENST00000531539 GAGE4Q13068 117 aa9.9□□□□□ -0.82
FOXR1-202ENST00000531539 GAGE5Q13069 117 aa9.9□□□□□ -0.82
FOXR1-202ENST00000531539 GAGE13Q4V321 117 aa9.9□□□□□ -0.82
FOXR1-202ENST00000531539 UFSP1Q6NVU6 142 aa9.9□□□□□ -0.82
FOXR1-202ENST00000531539 OR2D3Q8NGH3 330 aa9.9□□□□□ -0.82
FOXR1-202ENST00000531539 LYPD6BQ8NI32 183 aa9.9□□□□□ -0.82
FOXR1-202ENST00000531539 KRTAP1-5Q9BYS1 174 aa9.9□□□□□ -0.82
FOXR1-202ENST00000531539 TRBV20OR9-2A0A075B6H5 130 aa9.89□□□□□ -0.83
FOXR1-202ENST00000531539 A0A1W2PPQ1 181 aa9.89□□□□□ -0.83
FOXR1-202ENST00000531539 CRYGDP07320 174 aa9.89□□□□□ -0.83
FOXR1-202ENST00000531539 CXCL1P09341 107 aa9.89□□□□□ -0.83
FOXR1-202ENST00000531539 GZMBP10144 247 aa9.89□□□□□ -0.83
FOXR1-202ENST00000531539 CEBPGP53567 150 aa9.89□□□□□ -0.83
FOXR1-202ENST00000531539 SPANXN1Q5VSR9 72 aa9.89□□□□□ -0.83
FOXR1-202ENST00000531539 C14orf178Q8N769 122 aaPredicted RBP9.89□□□□□ -0.83
FOXR1-202ENST00000531539 OR10AG1Q8NH19 301 aa9.89□□□□□ -0.83
FOXR1-202ENST00000531539 ATP6V0E2Q8NHE4 81 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms