RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CCL18P55774 89 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 FAM3BP58499 235 aaPredicted RBP8.81□□□□□ -1
CCDC90B-216ENST00000529856 LINC01559Q495D7 138 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 DNLZQ5SXM8 178 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 ZNF575Q86XF7 245 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 OR4C5Q8NGB2 326 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 DERL1Q9BUN8 251 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 NACAE9PAV3 2078 aa8.81□□□□□ -1
CCDC90B-216ENST00000529856 TAGLN2P37802 199 aaKnown RBP8.8□□□□□ -1
CCDC90B-216ENST00000529856 ASIPP42127 132 aa8.8□□□□□ -1
CCDC90B-216ENST00000529856 LYPD6BQ8NI32 183 aa8.8□□□□□ -1
CCDC90B-216ENST00000529856 IL36BQ9NZH7 164 aa8.8□□□□□ -1
CCDC90B-216ENST00000529856 A0A096LPF7 62 aa8.79□□□□□ -1
CCDC90B-216ENST00000529856 GRIFINA4D1Z8 144 aa8.79□□□□□ -1
CCDC90B-216ENST00000529856 RS1O15537 224 aa8.79□□□□□ -1
CCDC90B-216ENST00000529856 ESRGQ1W209 222 aa8.79□□□□□ -1
CCDC90B-216ENST00000529856 ZNF506Q5JVG8 444 aa8.79□□□□□ -1
CCDC90B-216ENST00000529856 MED9Q9NWA0 146 aa8.79□□□□□ -1
CCDC90B-216ENST00000529856 LINC00588Q9Y4M8 146 aa8.79□□□□□ -1
CCDC90B-216ENST00000529856 TMSB15BA0A087X1C1 80 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 RAB19A4D1S5 217 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 J3QL48 77 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 CIDEAO60543 219 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 IGLV2-8P01709 118 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 ARMS2P0C7Q2 107 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 CENPWQ5EE01 88 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 PIK3CD-AS1Q5SR53 167 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 CFAP126Q5VTH2 177 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 ZNRF2Q8NHG8 242 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 ICOSQ9Y6W8 199 aa8.78□□□□□ -1
CCDC90B-216ENST00000529856 DNAH10Q8IVF4 4471 aa8.77□□□□□ -1.01
CCDC90B-216ENST00000529856 IGLV2-18A0A075B6J9 118 aa8.77□□□□□ -1.01
CCDC90B-216ENST00000529856 RBFOX3A6NFN3 312 aa8.77□□□□□ -1.01
CCDC90B-216ENST00000529856 H3BVH4 76 aa8.77□□□□□ -1.01
CCDC90B-216ENST00000529856 GNG4P50150 75 aa8.77□□□□□ -1.01
CCDC90B-216ENST00000529856 SCRT2Q9NQ03 307 aa8.77□□□□□ -1.01
CCDC90B-216ENST00000529856 M0R2N4 97 aa8.76□□□□□ -1.01
CCDC90B-216ENST00000529856 CXCL1P09341 107 aa8.76□□□□□ -1.01
CCDC90B-216ENST00000529856 GATA1P15976 413 aaPredicted RBP8.76□□□□□ -1.01
CCDC90B-216ENST00000529856 MRPL23Q16540 153 aaKnown RBP8.76□□□□□ -1.01
CCDC90B-216ENST00000529856 PRR27Q6MZM9 219 aa8.76□□□□□ -1.01
CCDC90B-216ENST00000529856 SMIM12Q96EX1 92 aa8.76□□□□□ -1.01
CCDC90B-216ENST00000529856 TRBV20OR9-2A0A075B6H5 130 aa8.75□□□□□ -1.01
CCDC90B-216ENST00000529856 A8MWV9 139 aa8.75□□□□□ -1.01
CCDC90B-216ENST00000529856 K7EQD1 137 aa8.75□□□□□ -1.01
CCDC90B-216ENST00000529856 MGST1P10620 155 aaKnown RBP8.75□□□□□ -1.01
CCDC90B-216ENST00000529856 GYPEP15421 78 aa8.75□□□□□ -1.01
CCDC90B-216ENST00000529856 RPL19P84098 196 aaKnown RBP8.75□□□□□ -1.01
CCDC90B-216ENST00000529856 Q6ZR54 194 aa8.75□□□□□ -1.01
CCDC90B-216ENST00000529856 PHLDA3Q9Y5J5 127 aa8.75□□□□□ -1.01
CCDC90B-216ENST00000529856 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 TRBV6-4A0A1B0GX49 114 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 C19orf71A6NCJ1 209 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 MED14OSP0DP75 135 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 TEX261Q6UWH6 196 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 ZFP2Q6ZN57 461 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 NEGR1Q7Z3B1 354 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 SLC25A29Q8N8R3 303 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 SYT8Q8NBV8 401 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 PCNPQ8WW12 178 aaKnown RBP8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 UPK3BQ9BT76 320 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 PARLQ9H300 379 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 JPT2Q9H910 190 aa8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 MRPS16Q9Y3D3 137 aaKnown RBP8.74□□□□□ -1.01
CCDC90B-216ENST00000529856 TMEM250H0YL14 139 aa8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 SRIP30626 198 aa8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 LCE2CQ5TA81 110 aa8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 UFSP1Q6NVU6 142 aa8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 LYPD5Q6UWN5 251 aa8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 ZFP82Q8N141 532 aa8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 DAZAP1Q96EP5 407 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 SSBP4Q9BWG4 385 aaPredicted RBP8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 SAMD10Q9BYL1 202 aa8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 Q9H8V8 135 aa8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 BIN3Q9NQY0 253 aa8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 EPPK1P58107 5090 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-216ENST00000529856 DNAH2Q9P225 4427 aa8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 LOC100131303A0A0U1RQF7 123 aa8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 NBDYA0A0U1RRE5 68 aa8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 M0R381 172 aa8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 NDUFS6O75380 124 aaKnown RBP8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 TOR2AQ5JU69 321 aa8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 Q6ZSN1 163 aa8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 SFRP2Q96HF1 295 aa8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 FAM210AQ96ND0 272 aa8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 PRADC1Q9BSG0 188 aa8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 EIF5A2Q9GZV4 153 aaKnown RBP8.72□□□□□ -1.01
CCDC90B-216ENST00000529856 SNAI2O43623 268 aa8.71□□□□□ -1.02
CCDC90B-216ENST00000529856 OR5AL1P0C617 328 aa8.71□□□□□ -1.02
CCDC90B-216ENST00000529856 RPS20P60866 119 aaKnown RBP8.71□□□□□ -1.02
CCDC90B-216ENST00000529856 RHOHQ15669 191 aa8.71□□□□□ -1.02
CCDC90B-216ENST00000529856 SH2D6Q7Z4S9 175 aa8.71□□□□□ -1.02
CCDC90B-216ENST00000529856 OR2D3Q8NGH3 330 aa8.71□□□□□ -1.02
CCDC90B-216ENST00000529856 OCC1Q8TAD7 63 aa8.71□□□□□ -1.02
CCDC90B-216ENST00000529856 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
CCDC90B-216ENST00000529856 RHODO00212 210 aa8.7□□□□□ -1.02
CCDC90B-216ENST00000529856 NXPH4O95158 308 aa8.7□□□□□ -1.02
CCDC90B-216ENST00000529856 P01737 135 aa8.7□□□□□ -1.02
CCDC90B-216ENST00000529856 CRYGDP07320 174 aa8.7□□□□□ -1.02
CCDC90B-216ENST00000529856 OR10AG1Q8NH19 301 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms