RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 EP400Q96L91 3159 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 POLEQ07864 2286 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 TRBV6-6A0A0A6YYG2 114 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 RBAKDNA6NC62 111 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 SMIM9A6NGZ8 99 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 IGHV1-46P01743 117 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 COA6Q5JTJ3 125 aaKnown RBP5.71□□□□□ -1.5
CTNND1-216ENST00000527467 TMEM14CQ9P0S9 112 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 CACNA1EQ15878 2313 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 CEP250Q9BV73 2442 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 IGKV1-12A0A0C4DH73 117 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 TRBV27A0A0K0K1C4 114 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 LYNX1G3V0Z9 82 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 IGKV1D-12P01611 117 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 LYNX1P0DP58 116 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 FAM19A3Q7Z5A8 133 aa5.71□□□□□ -1.5
CTNND1-216ENST00000527467 LINC00473A8K010 186 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 BUB1B-PAK6H3BSN5 160 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 MLANAQ16655 118 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 ZNF837Q96EG3 531 aaPredicted RBP5.7□□□□□ -1.5
CTNND1-216ENST00000527467 GPR179Q6PRD1 2367 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 NCR3O14931 201 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 NDUFA1O15239 70 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 C10orf91Q5T1B1 145 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 Q6P435 159 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 FAM110DQ8TAY7 271 aaPredicted RBP5.7□□□□□ -1.5
CTNND1-216ENST00000527467 TEX49A0A1B0GTD5 131 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 BLCAPP62952 87 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 DEFB112Q30KQ8 113 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 FAM222AQ5U5X8 452 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 ENHOQ6UWT2 76 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 VOPP1Q96AW1 172 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 TM2D2Q9BX73 214 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 COX7BP24311 80 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 MRPS36P82909 103 aaKnown RBP5.7□□□□□ -1.5
CTNND1-216ENST00000527467 LINC00114Q6XXX2 140 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 ZC2HC1AQ96GY0 325 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 ZMAT4Q9H898 229 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 Q9HAA7 133 aa5.7□□□□□ -1.5
CTNND1-216ENST00000527467 LINC01619G3V211 115 aa5.69□□□□□ -1.5
CTNND1-216ENST00000527467 ABCA4P78363 2273 aa5.69□□□□□ -1.5
CTNND1-216ENST00000527467 A0A0J9YXV3 536 aa5.69□□□□□ -1.5
CTNND1-216ENST00000527467 Q6ZQT7 251 aa5.69□□□□□ -1.5
CTNND1-216ENST00000527467 GFI1Q99684 422 aa5.69□□□□□ -1.5
CTNND1-216ENST00000527467 WDR86Q86TI4 376 aa5.69□□□□□ -1.5
CTNND1-216ENST00000527467 ZNF491Q8N8L2 437 aa5.69□□□□□ -1.5
CTNND1-216ENST00000527467 PIFOQ8TCI5 191 aa5.69□□□□□ -1.5
CTNND1-216ENST00000527467 SCN8AQ9UQD0 1980 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 TMEM178BH3BS89 294 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 K7EM74 188 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 MSMBP08118 114 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 B9D2Q9BPU9 175 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 DOCK6Q96HP0 2047 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 SCN3AQ9NY46 2000 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 C4orf51C9J302 202 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 H3BRN7 92 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 NANOS2P60321 138 aaKnown RBP5.68□□□□□ -1.5
CTNND1-216ENST00000527467 PRR20EP86478 221 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 PRR20CP86479 221 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 PRR20DP86480 221 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 PRR20BP86481 221 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 PRR20AP86496 221 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 FAM120AOSQ5T036 256 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 TEX36Q5VZQ5 186 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 Q6ZS49 121 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 MBD6Q96DN6 1003 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 CREBBPQ92793 2442 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 IGHV1-18A0A0C4DH31 117 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 A0A0G2JRQ6 117 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 NDUFA4O00483 81 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 CDPF1Q6NVV7 123 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 Q6ZRM9 215 aa5.68□□□□□ -1.5
CTNND1-216ENST00000527467 E9PLD3 99 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 COX7CP15954 63 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 ASPHD1Q5U4P2 390 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 DAND5Q8N907 189 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 SNURFQ9Y675 71 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 TGFBR3LH3BV60 316 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 SPAG11BQ08648 103 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 BRD3OSQ6XYD6 125 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 CD177Q8N6Q3 437 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 SPRR3Q9UBC9 169 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 ANK1P16157 1881 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 C5orf63A6NC05 138 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 WFDC10BQ8IUB3 73 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 LCTP09848 1927 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 TCL1BO95988 128 aa5.67□□□□□ -1.5
CTNND1-216ENST00000527467 PI4KAP42356 2102 aa5.66□□□□□ -1.5
CTNND1-216ENST00000527467 GBF1Q92538 1859 aa5.66□□□□□ -1.5
CTNND1-216ENST00000527467 INTS1Q8N201 2190 aaKnown RBP5.66□□□□□ -1.5
CTNND1-216ENST00000527467 A0A0J9YY99 117 aa5.66□□□□□ -1.5
CTNND1-216ENST00000527467 J3QRE1 110 aa5.66□□□□□ -1.5
CTNND1-216ENST00000527467 SCXQ7RTU7 201 aa5.66□□□□□ -1.5
CTNND1-216ENST00000527467 NDUFA11Q86Y39 141 aa5.66□□□□□ -1.5
CTNND1-216ENST00000527467 ZNF726P1Q15940 193 aa5.66□□□□□ -1.5
CTNND1-216ENST00000527467 FBXL19-AS1Q494R0 122 aa5.66□□□□□ -1.5
CTNND1-216ENST00000527467 LENEPQ9Y5L5 61 aa5.66□□□□□ -1.5
CTNND1-216ENST00000527467 IGLV10-54A0A075B6I4 117 aa5.65□□□□□ -1.5
CTNND1-216ENST00000527467 ADORA2A-AS1P86434 159 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms