RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 GAGE5Q13069 117 aa15.8■□□□□ 0.12
USP47-205ENST00000525257 GAGE13Q4V321 117 aa15.8■□□□□ 0.12
USP47-205ENST00000525257 OR10G9Q8NGN4 311 aa15.8■□□□□ 0.12
USP47-205ENST00000525257 OR10G7Q8NGN6 311 aa15.8■□□□□ 0.12
USP47-205ENST00000525257 NDUFA13Q9P0J0 144 aa15.8■□□□□ 0.12
USP47-205ENST00000525257 SERTM2A0A1B0GWG4 89 aa15.79■□□□□ 0.12
USP47-205ENST00000525257 INMT-MINDY4F8WBC2 141 aa15.79■□□□□ 0.12
USP47-205ENST00000525257 TCRAP04437 139 aa15.79■□□□□ 0.12
USP47-205ENST00000525257 RNASE3P12724 160 aaKnown RBP15.79■□□□□ 0.12
USP47-205ENST00000525257 BAALCQ8WXS3 180 aa15.79■□□□□ 0.12
USP47-205ENST00000525257 PTH2Q96A98 100 aa15.79■□□□□ 0.12
USP47-205ENST00000525257 PSG8Q9UQ74 426 aa15.79■□□□□ 0.12
USP47-205ENST00000525257 SCXQ7RTU7 201 aa15.78■□□□□ 0.12
USP47-205ENST00000525257 C5orf17Q8NAS9 161 aa15.78■□□□□ 0.12
USP47-205ENST00000525257 PARLQ9H300 379 aa15.78■□□□□ 0.12
USP47-205ENST00000525257 HMCN2Q8NDA2 5059 aa15.77■□□□□ 0.12
USP47-205ENST00000525257 K7EQM0 130 aa15.77■□□□□ 0.12
USP47-205ENST00000525257 LINC00694P0DN24 101 aa15.77■□□□□ 0.12
USP47-205ENST00000525257 ZFP69Q49AA0 526 aa15.77■□□□□ 0.12
USP47-205ENST00000525257 SMUG1Q53HV7 270 aa15.77■□□□□ 0.12
USP47-205ENST00000525257 TOR2AQ5JU69 321 aa15.77■□□□□ 0.12
USP47-205ENST00000525257 SH3BGRL3Q9H299 93 aa15.77■□□□□ 0.12
USP47-205ENST00000525257 GGTLC3B5MD39 225 aa15.76■□□□□ 0.11
USP47-205ENST00000525257 SSNA1O43805 119 aa15.76■□□□□ 0.11
USP47-205ENST00000525257 CDC34P49427 236 aaPredicted RBP15.76■□□□□ 0.11
USP47-205ENST00000525257 PRNTQ86SH4 94 aa15.76■□□□□ 0.11
USP47-205ENST00000525257 S100ZQ8WXG8 99 aa15.76■□□□□ 0.11
USP47-205ENST00000525257 Q9UF83 564 aa15.76■□□□□ 0.11
USP47-205ENST00000525257 FAT3Q8TDW7 4589 aa15.76■□□□□ 0.11
USP47-205ENST00000525257 UPK1BO75841 260 aa15.75■□□□□ 0.11
USP47-205ENST00000525257 IGLV2-11P01706 119 aa15.75■□□□□ 0.11
USP47-205ENST00000525257 FLI1Q01543 452 aaPredicted RBP15.75■□□□□ 0.11
USP47-205ENST00000525257 OR2T35Q8NGX2 323 aa15.75■□□□□ 0.11
USP47-205ENST00000525257 RBFOX3A6NFN3 312 aa15.74■□□□□ 0.11
USP47-205ENST00000525257 STAG3L2P0CL84 134 aa15.74■□□□□ 0.11
USP47-205ENST00000525257 STAG3L3P0CL85 134 aa15.74■□□□□ 0.11
USP47-205ENST00000525257 LGALSLQ3ZCW2 172 aaPredicted RBP15.74■□□□□ 0.11
USP47-205ENST00000525257 ZFP2Q6ZN57 461 aa15.74■□□□□ 0.11
USP47-205ENST00000525257 A8MWV9 139 aa15.73■□□□□ 0.11
USP47-205ENST00000525257 LINC00299Q6ZSB3 139 aa15.73■□□□□ 0.11
USP47-205ENST00000525257 CYB561D1Q8N8Q1 229 aa15.73■□□□□ 0.11
USP47-205ENST00000525257 SAMD10Q9BYL1 202 aa15.73■□□□□ 0.11
USP47-205ENST00000525257 COX11Q9Y6N1 276 aa15.73■□□□□ 0.11
USP47-205ENST00000525257 S100A4P26447 101 aaKnown RBP15.72■□□□□ 0.11
USP47-205ENST00000525257 GCHFRP30047 84 aa15.72■□□□□ 0.11
USP47-205ENST00000525257 IFITM3Q01628 133 aa15.72■□□□□ 0.11
USP47-205ENST00000525257 C14orf178Q8N769 122 aaPredicted RBP15.72■□□□□ 0.11
USP47-205ENST00000525257 DNAJC30Q96LL9 226 aa15.72■□□□□ 0.11
USP47-205ENST00000525257 JPT2Q9H910 190 aa15.72■□□□□ 0.11
USP47-205ENST00000525257 A0A087WWC5 75 aa15.71■□□□□ 0.11
USP47-205ENST00000525257 SUMO1P63165 101 aaKnown RBP15.71■□□□□ 0.11
USP47-205ENST00000525257 SUN5Q8TC36 379 aa15.71■□□□□ 0.11
USP47-205ENST00000525257 RAB24Q969Q5 203 aa15.71■□□□□ 0.11
USP47-205ENST00000525257 RMI2Q96E14 147 aa15.71■□□□□ 0.11
USP47-205ENST00000525257 LINC00479Q96M42 142 aa15.71■□□□□ 0.11
USP47-205ENST00000525257 MARVELD1Q9BSK0 173 aa15.71■□□□□ 0.11
USP47-205ENST00000525257 EPDR1Q9UM22 224 aa15.71■□□□□ 0.11
USP47-205ENST00000525257 IGKV2D-24A0A075B6R9 120 aa15.7■□□□□ 0.1
USP47-205ENST00000525257 IGKV3D-20A0A0C4DH25 116 aa15.7■□□□□ 0.1
USP47-205ENST00000525257 Q8N976 141 aa15.7■□□□□ 0.1
USP47-205ENST00000525257 CHAC1Q9BUX1 264 aa15.7■□□□□ 0.1
USP47-205ENST00000525257 URGCP-MRPS24S4R325 110 aa15.7■□□□□ 0.1
USP47-205ENST00000525257 ASIPP42127 132 aa15.69■□□□□ 0.1
USP47-205ENST00000525257 FGF8P55075 233 aaPredicted RBP15.69■□□□□ 0.1
USP47-205ENST00000525257 KRTAP10-4P60372 401 aaPredicted RBP15.69■□□□□ 0.1
USP47-205ENST00000525257 SERTAD4-AS1Q5TG53 156 aa15.69■□□□□ 0.1
USP47-205ENST00000525257 UFSP1Q6NVU6 142 aa15.69■□□□□ 0.1
USP47-205ENST00000525257 HSD17B11Q8NBQ5 300 aa15.69■□□□□ 0.1
USP47-205ENST00000525257 SYT8Q8NBV8 401 aa15.69■□□□□ 0.1
USP47-205ENST00000525257 PIK3CD-AS1Q5SR53 167 aa15.68■□□□□ 0.1
USP47-205ENST00000525257 SAPCD1Q5SSQ6 148 aa15.68■□□□□ 0.1
USP47-205ENST00000525257 NIT1Q86X76 327 aa15.68■□□□□ 0.1
USP47-205ENST00000525257 OR2G3Q8NGZ4 309 aa15.68■□□□□ 0.1
USP47-205ENST00000525257 KLK12Q9UKR0 248 aa15.68■□□□□ 0.1
USP47-205ENST00000525257 UBR4Q5T4S7 5183 aa15.67■□□□□ 0.1
USP47-205ENST00000525257 RNF222A6NCQ9 220 aa15.67■□□□□ 0.1
USP47-205ENST00000525257 CIRBP-AS1Q8TBR5 109 aa15.67■□□□□ 0.1
USP47-205ENST00000525257 PKHD1L1Q86WI1 4243 aa15.67■□□□□ 0.1
USP47-205ENST00000525257 TRAV34A0A0B4J273 112 aa15.66■□□□□ 0.1
USP47-205ENST00000525257 TMEM167BQ9NRX6 74 aa15.66■□□□□ 0.1
USP47-205ENST00000525257 H3BVH4 76 aa15.65■□□□□ 0.1
USP47-205ENST00000525257 DMRTA1Q5VZB9 504 aa15.65■□□□□ 0.1
USP47-205ENST00000525257 UBE2WQ96B02 151 aa15.65■□□□□ 0.1
USP47-205ENST00000525257 IL36BQ9NZH7 164 aa15.65■□□□□ 0.1
USP47-205ENST00000525257 ARL2-SNX15V9GYD0 113 aa15.65■□□□□ 0.1
USP47-205ENST00000525257 CXorf1O96002 111 aa15.64■□□□□ 0.09
USP47-205ENST00000525257 SEC11BP0C7V7 166 aa15.64■□□□□ 0.09
USP47-205ENST00000525257 FAM74A4Q5TZK3 123 aa15.64■□□□□ 0.09
USP47-205ENST00000525257 PSMG3Q9BT73 122 aaPredicted RBP15.64■□□□□ 0.09
USP47-205ENST00000525257 FABP5P3A8MUU1 101 aa15.63■□□□□ 0.09
USP47-205ENST00000525257 B4DEV8 164 aa15.63■□□□□ 0.09
USP47-205ENST00000525257 RHODO00212 210 aa15.63■□□□□ 0.09
USP47-205ENST00000525257 OXTP01178 125 aa15.63■□□□□ 0.09
USP47-205ENST00000525257 ATP6V0CP27449 155 aa15.63■□□□□ 0.09
USP47-205ENST00000525257 A0A087WX48 190 aa15.62■□□□□ 0.09
USP47-205ENST00000525257 MBP02144 154 aa15.61■□□□□ 0.09
USP47-205ENST00000525257 ACTR3CQ9C0K3 210 aaPredicted RBP15.61■□□□□ 0.09
USP47-205ENST00000525257 A0A087WWL8 130 aa15.6■□□□□ 0.09
USP47-205ENST00000525257 M0R036 132 aa15.6■□□□□ 0.09
USP47-205ENST00000525257 IFNA7P01567 189 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms