RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 EDF1O60869 148 aaKnown RBP3.85□□□□□ -1.79
NEDD8-203ENST00000524927 MT-ND6P03923 174 aa3.85□□□□□ -1.79
NEDD8-203ENST00000524927 DTYMKP23919 212 aa3.85□□□□□ -1.79
NEDD8-203ENST00000524927 SPANXN2Q5MJ10 180 aa3.85□□□□□ -1.79
NEDD8-203ENST00000524927 LINC00173Q6ZV60 143 aa3.85□□□□□ -1.79
NEDD8-203ENST00000524927 OR4C5Q8NGB2 326 aa3.85□□□□□ -1.79
NEDD8-203ENST00000524927 IGLV10-54A0A075B6I4 117 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 PNMA8CA0A1B0GUJ8 204 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 C7orf71A4D174 169 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 SNRPGP15A8MWD9 76 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 MPDU1O75352 247 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 CRPP02741 224 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 IGLV7-43P04211 117 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 SLC25A5P05141 298 aaKnown RBP3.84□□□□□ -1.79
NEDD8-203ENST00000524927 HTR2BP41595 481 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 TSPAN5P62079 268 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 SS18Q15532 418 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 RHOHQ15669 191 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 C1orf137Q5JT78 98 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 ENHOQ6UWT2 76 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 SLC25A29Q8N8R3 303 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 RNASEH2CQ8TDP1 164 aaKnown RBP3.84□□□□□ -1.79
NEDD8-203ENST00000524927 BORCS5Q969J3 196 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 SAMD10Q9BYL1 202 aa3.84□□□□□ -1.79
NEDD8-203ENST00000524927 A0A087WX48 190 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 TRBV6-4A0A1B0GX49 114 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 CRYM-AS1A6NIL9 109 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 MRPS12O15235 138 aaKnown RBP3.83□□□□□ -1.8
NEDD8-203ENST00000524927 FABP1P07148 127 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 CXCL5P42830 114 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 BTN1A1Q13410 526 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 RAB31Q13636 194 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 ZNF818PQ6ZRF7 136 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 OR10R2Q8NGX6 335 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 MARCH1Q8TCQ1 289 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 ACY3Q96HD9 319 aa3.83□□□□□ -1.8
NEDD8-203ENST00000524927 NAA50Q9GZZ1 169 aaKnown RBP3.83□□□□□ -1.8
NEDD8-203ENST00000524927 PPYP01298 95 aa3.82□□□□□ -1.8
NEDD8-203ENST00000524927 LIMS3P0CW19 117 aa3.82□□□□□ -1.8
NEDD8-203ENST00000524927 LIMS4P0CW20 117 aa3.82□□□□□ -1.8
NEDD8-203ENST00000524927 HIST1H1DP16402 221 aaKnown RBP3.82□□□□□ -1.8
NEDD8-203ENST00000524927 GADD45AP24522 165 aa3.82□□□□□ -1.8
NEDD8-203ENST00000524927 MIAQ16674 131 aa3.82□□□□□ -1.8
NEDD8-203ENST00000524927 KRTAP13-3Q3SY46 172 aa3.82□□□□□ -1.8
NEDD8-203ENST00000524927 C22orf42Q6IC83 251 aa3.82□□□□□ -1.8
NEDD8-203ENST00000524927 FAM3DQ96BQ1 224 aa3.82□□□□□ -1.8
NEDD8-203ENST00000524927 RPP21Q9H633 154 aaKnown RBP3.82□□□□□ -1.8
NEDD8-203ENST00000524927 ENY2Q9NPA8 101 aa3.82□□□□□ -1.8
NEDD8-203ENST00000524927 A0A096LNI7 61 aa3.81□□□□□ -1.8
NEDD8-203ENST00000524927 LINC00854A0A1B0GVQ3 168 aa3.81□□□□□ -1.8
NEDD8-203ENST00000524927 HLA-DMAP28067 261 aa3.81□□□□□ -1.8
NEDD8-203ENST00000524927 S100A7P31151 101 aa3.81□□□□□ -1.8
NEDD8-203ENST00000524927 ZNF90Q03938 601 aa3.81□□□□□ -1.8
NEDD8-203ENST00000524927 TMPRSS11AQ6ZMR5 421 aa3.81□□□□□ -1.8
NEDD8-203ENST00000524927 CYB561D1Q8N8Q1 229 aa3.81□□□□□ -1.8
NEDD8-203ENST00000524927 CENPNQ96H22 339 aaPredicted RBP3.81□□□□□ -1.8
NEDD8-203ENST00000524927 TMBIM4Q9HC24 238 aa3.81□□□□□ -1.8
NEDD8-203ENST00000524927 ANXA10Q9UJ72 324 aa3.81□□□□□ -1.8
NEDD8-203ENST00000524927 PGLYRP1O75594 196 aaPredicted RBP3.8□□□□□ -1.8
NEDD8-203ENST00000524927 CFDP00746 253 aaPredicted RBP3.8□□□□□ -1.8
NEDD8-203ENST00000524927 UBE2AP49459 152 aa3.8□□□□□ -1.8
NEDD8-203ENST00000524927 CTAG1AP78358 180 aa3.8□□□□□ -1.8
NEDD8-203ENST00000524927 KRTAP26-1Q6PEX3 210 aa3.8□□□□□ -1.8
NEDD8-203ENST00000524927 LGI3Q8N145 548 aa3.8□□□□□ -1.8
NEDD8-203ENST00000524927 ARRDC1Q8N5I2 433 aa3.8□□□□□ -1.8
NEDD8-203ENST00000524927 LRRC20Q8TCA0 184 aa3.8□□□□□ -1.8
NEDD8-203ENST00000524927 PDCD10Q9BUL8 212 aa3.8□□□□□ -1.8
NEDD8-203ENST00000524927 PKIGQ9Y2B9 76 aa3.8□□□□□ -1.8
NEDD8-203ENST00000524927 A0A1B0GVG6 124 aa3.79□□□□□ -1.8
NEDD8-203ENST00000524927 WRBO00258 174 aa3.79□□□□□ -1.8
NEDD8-203ENST00000524927 LINC00694P0DN24 101 aa3.79□□□□□ -1.8
NEDD8-203ENST00000524927 RPL7P18124 248 aaKnown RBP3.79□□□□□ -1.8
NEDD8-203ENST00000524927 POLR2IP36954 125 aaKnown RBP3.79□□□□□ -1.8
NEDD8-203ENST00000524927 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
NEDD8-203ENST00000524927 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
NEDD8-203ENST00000524927 FAM210AQ96ND0 272 aa3.79□□□□□ -1.8
NEDD8-203ENST00000524927 CIB1Q99828 191 aa3.79□□□□□ -1.8
NEDD8-203ENST00000524927 GEMIN7Q9H840 131 aaKnown RBP3.79□□□□□ -1.8
NEDD8-203ENST00000524927 SSR3Q9UNL2 185 aa3.79□□□□□ -1.8
NEDD8-203ENST00000524927 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 IGKV1D-37A0A075B6S9 117 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 SERTM2A0A1B0GWG4 89 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 ANKRD65E5RJM6 399 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 RAB3DO95716 219 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 RANBP1P43487 201 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 FXYD4P59646 89 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 RPS25P62851 125 aaKnown RBP3.78□□□□□ -1.8
NEDD8-203ENST00000524927 FP248Q71RG6 208 aaPredicted RBP3.78□□□□□ -1.8
NEDD8-203ENST00000524927 LINC00167Q96N53 147 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 MIXL1Q9H2W2 232 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 RABL2AQ9UBK7 228 aaPredicted RBP3.78□□□□□ -1.8
NEDD8-203ENST00000524927 RAB22AQ9UL26 194 aa3.78□□□□□ -1.8
NEDD8-203ENST00000524927 GNAO1P09471 354 aa3.77□□□□□ -1.81
NEDD8-203ENST00000524927 CXCL2P19875 107 aa3.77□□□□□ -1.81
NEDD8-203ENST00000524927 RNASE4P34096 147 aaKnown RBP3.77□□□□□ -1.81
NEDD8-203ENST00000524927 IL18Q14116 193 aa3.77□□□□□ -1.81
NEDD8-203ENST00000524927 TEX43Q6ZNM6 134 aa3.77□□□□□ -1.81
NEDD8-203ENST00000524927 PCP2Q8IVA1 136 aa3.77□□□□□ -1.81
NEDD8-203ENST00000524927 SDHCQ99643 169 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms