RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ZFP30Q9Y2G7 519 aa9.14□□□□□ -0.95
VEGFA-219ENST00000518824 TMSB15BA0A087X1C1 80 aa9.13□□□□□ -0.95
VEGFA-219ENST00000518824 B4DEV8 164 aa9.13□□□□□ -0.95
VEGFA-219ENST00000518824 ZNF674Q2M3X9 581 aa9.13□□□□□ -0.95
VEGFA-219ENST00000518824 C1orf134Q5TEV5 83 aa9.13□□□□□ -0.95
VEGFA-219ENST00000518824 LYPD5Q6UWN5 251 aa9.13□□□□□ -0.95
VEGFA-219ENST00000518824 UPK3BQ9BT76 320 aa9.13□□□□□ -0.95
VEGFA-219ENST00000518824 DERL1Q9BUN8 251 aa9.13□□□□□ -0.95
VEGFA-219ENST00000518824 TRAV1-1A0A0B4J248 108 aa9.12□□□□□ -0.95
VEGFA-219ENST00000518824 H3BVH4 76 aa9.12□□□□□ -0.95
VEGFA-219ENST00000518824 GATA1P15976 413 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-219ENST00000518824 NKX2-5P52952 324 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-219ENST00000518824 RPL19P84098 196 aaKnown RBP9.12□□□□□ -0.95
VEGFA-219ENST00000518824 SLAQ13239 276 aa9.12□□□□□ -0.95
VEGFA-219ENST00000518824 Q6ZSN1 163 aa9.12□□□□□ -0.95
VEGFA-219ENST00000518824 LINC00336Q6ZUF6 198 aa9.12□□□□□ -0.95
VEGFA-219ENST00000518824 SLC51BQ86UW2 128 aa9.12□□□□□ -0.95
VEGFA-219ENST00000518824 PKD1P98161 4303 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 NXPH4O95158 308 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 ASIPP42127 132 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 TNP2Q05952 138 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 MRPL23Q16540 153 aaKnown RBP9.11□□□□□ -0.95
VEGFA-219ENST00000518824 FAM162BQ5T6X4 162 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 TCEAL7Q9BRU2 100 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 MLST8Q9BVC4 326 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 SAMD10Q9BYL1 202 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 Q9UF83 564 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 BOLA1Q9Y3E2 137 aa9.11□□□□□ -0.95
VEGFA-219ENST00000518824 ARMS2P0C7Q2 107 aa9.1□□□□□ -0.95
VEGFA-219ENST00000518824 S100A4P26447 101 aaKnown RBP9.1□□□□□ -0.95
VEGFA-219ENST00000518824 RAB5CP51148 216 aa9.1□□□□□ -0.95
VEGFA-219ENST00000518824 NEGR1Q7Z3B1 354 aa9.1□□□□□ -0.95
VEGFA-219ENST00000518824 C6orf223Q8N319 242 aa9.1□□□□□ -0.95
VEGFA-219ENST00000518824 SLC25A29Q8N8R3 303 aa9.1□□□□□ -0.95
VEGFA-219ENST00000518824 PTH2Q96A98 100 aa9.1□□□□□ -0.95
VEGFA-219ENST00000518824 SRIP30626 198 aa9.09□□□□□ -0.95
VEGFA-219ENST00000518824 RPL35P42766 123 aaKnown RBP9.09□□□□□ -0.95
VEGFA-219ENST00000518824 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
VEGFA-219ENST00000518824 DNLZQ5SXM8 178 aa9.09□□□□□ -0.95
VEGFA-219ENST00000518824 BAGE2Q86Y30 109 aa9.09□□□□□ -0.95
VEGFA-219ENST00000518824 C11orf52Q96A22 123 aa9.09□□□□□ -0.95
VEGFA-219ENST00000518824 PARLQ9H300 379 aa9.09□□□□□ -0.95
VEGFA-219ENST00000518824 MANBALQ9NQG1 85 aa9.09□□□□□ -0.95
VEGFA-219ENST00000518824 IL36BQ9NZH7 164 aa9.09□□□□□ -0.95
VEGFA-219ENST00000518824 TNFRSF18Q9Y5U5 241 aa9.09□□□□□ -0.95
VEGFA-219ENST00000518824 RAB19A4D1S5 217 aa9.08□□□□□ -0.96
VEGFA-219ENST00000518824 IGLV2-8P01709 118 aa9.08□□□□□ -0.96
VEGFA-219ENST00000518824 EIF5AL1Q6IS14 154 aaKnown RBP9.08□□□□□ -0.96
VEGFA-219ENST00000518824 PRR27Q6MZM9 219 aa9.08□□□□□ -0.96
VEGFA-219ENST00000518824 UFSP1Q6NVU6 142 aa9.08□□□□□ -0.96
VEGFA-219ENST00000518824 ALKAL2Q6UX46 152 aa9.08□□□□□ -0.96
VEGFA-219ENST00000518824 WFDC10BQ8IUB3 73 aa9.08□□□□□ -0.96
VEGFA-219ENST00000518824 SCRT2Q9NQ03 307 aa9.08□□□□□ -0.96
VEGFA-219ENST00000518824 SIVA1O15304 175 aa9.07□□□□□ -0.96
VEGFA-219ENST00000518824 S100A9P06702 114 aaKnown RBP9.07□□□□□ -0.96
VEGFA-219ENST00000518824 PCNPQ8WW12 178 aaKnown RBP9.07□□□□□ -0.96
VEGFA-219ENST00000518824 MUC21A0A0G2JKD1 596 aa9.06□□□□□ -0.96
VEGFA-219ENST00000518824 MUC21A0A140T8X8 626 aa9.06□□□□□ -0.96
VEGFA-219ENST00000518824 CENPWQ5EE01 88 aa9.06□□□□□ -0.96
VEGFA-219ENST00000518824 C14orf178Q8N769 122 aaPredicted RBP9.06□□□□□ -0.96
VEGFA-219ENST00000518824 TRBV20OR9-2A0A075B6H5 130 aa9.05□□□□□ -0.96
VEGFA-219ENST00000518824 A0A087WWL8 130 aa9.05□□□□□ -0.96
VEGFA-219ENST00000518824 TRBV6-4A0A1B0GX49 114 aa9.05□□□□□ -0.96
VEGFA-219ENST00000518824 M0R381 172 aa9.05□□□□□ -0.96
VEGFA-219ENST00000518824 BCL2P10415 239 aa9.05□□□□□ -0.96
VEGFA-219ENST00000518824 LINC00315P59091 139 aa9.05□□□□□ -0.96
VEGFA-219ENST00000518824 MEF2BQ02080 365 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-219ENST00000518824 SOHLH1Q5JUK2 328 aa9.05□□□□□ -0.96
VEGFA-219ENST00000518824 TXNDC17Q9BRA2 123 aa9.05□□□□□ -0.96
VEGFA-219ENST00000518824 DNAH11Q96DT5 4516 aa9.05□□□□□ -0.96
VEGFA-219ENST00000518824 PKHD1P08F94 4074 aa9.05□□□□□ -0.96
VEGFA-219ENST00000518824 A8MWV9 139 aa9.04□□□□□ -0.96
VEGFA-219ENST00000518824 CRYGDP07320 174 aa9.04□□□□□ -0.96
VEGFA-219ENST00000518824 GZMBP10144 247 aa9.04□□□□□ -0.96
VEGFA-219ENST00000518824 RHOHQ15669 191 aa9.04□□□□□ -0.96
VEGFA-219ENST00000518824 TTC32Q5I0X7 151 aa9.04□□□□□ -0.96
VEGFA-219ENST00000518824 Q6ZRN7 208 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-219ENST00000518824 OR10AG1Q8NH19 301 aa9.04□□□□□ -0.96
VEGFA-219ENST00000518824 PHLDA3Q9Y5J5 127 aa9.04□□□□□ -0.96
VEGFA-219ENST00000518824 A0A1W2PPQ1 181 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 GAGE12JA6NER3 117 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 TEX46H3BTG2 121 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 LINC00694P0DN24 101 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 MGST1P10620 155 aaKnown RBP9.03□□□□□ -0.96
VEGFA-219ENST00000518824 SSTP61278 116 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 GAGE1Q13065 139 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 GAGE4Q13068 117 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 GAGE5Q13069 117 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 GAGE13Q4V321 117 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 PIK3CD-AS1Q5SR53 167 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 FAM74A4Q5TZK3 123 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 ZFP2Q6ZN57 461 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 SFRP2Q96HF1 295 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 PRADC1Q9BSG0 188 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 MED9Q9NWA0 146 aa9.03□□□□□ -0.96
VEGFA-219ENST00000518824 DYNC1H1Q14204 4646 aaKnown RBP9.02□□□□□ -0.97
VEGFA-219ENST00000518824 CIDEAO60543 219 aa9.02□□□□□ -0.97
VEGFA-219ENST00000518824 Q8N3U1 123 aa9.02□□□□□ -0.97
VEGFA-219ENST00000518824 SYT8Q8NBV8 401 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms