RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 ZNF506Q5JVG8 444 aa9.67□□□□□ -0.86
PDGFRB-202ENST00000517488 CFAP126Q5VTH2 177 aa9.67□□□□□ -0.86
PDGFRB-202ENST00000517488 NEGR1Q7Z3B1 354 aa9.67□□□□□ -0.86
PDGFRB-202ENST00000517488 SCO2A0A1W2PP80 73 aa9.66□□□□□ -0.86
PDGFRB-202ENST00000517488 B4DEV8 164 aa9.66□□□□□ -0.86
PDGFRB-202ENST00000517488 SH2D1AO60880 128 aa9.66□□□□□ -0.86
PDGFRB-202ENST00000517488 NXPH4O95158 308 aa9.66□□□□□ -0.86
PDGFRB-202ENST00000517488 ORM1P02763 201 aa9.66□□□□□ -0.86
PDGFRB-202ENST00000517488 SRIP30626 198 aa9.66□□□□□ -0.86
PDGFRB-202ENST00000517488 TNP2Q05952 138 aa9.66□□□□□ -0.86
PDGFRB-202ENST00000517488 PCNPQ8WW12 178 aaKnown RBP9.66□□□□□ -0.86
PDGFRB-202ENST00000517488 PTH2Q96A98 100 aa9.66□□□□□ -0.86
PDGFRB-202ENST00000517488 hCG_2014768A0A024R1R8 64 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 IGHV3-73A0A0B4J1V6 119 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 KRBOX1C9JBD0 128 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 M0R036 132 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 C1QBP02746 253 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 S100A4P26447 101 aaKnown RBP9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 ASIPP42127 132 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 TTC32Q5I0X7 151 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 FAM162BQ5T6X4 162 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 ZNF575Q86XF7 245 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 NHLRC2Q8NBF2 726 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 RYR1P21817 5038 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 DNAH5Q8TE73 4624 aa9.65□□□□□ -0.86
PDGFRB-202ENST00000517488 A0A1W2PPQ1 181 aa9.64□□□□□ -0.87
PDGFRB-202ENST00000517488 GRIFINA4D1Z8 144 aa9.64□□□□□ -0.87
PDGFRB-202ENST00000517488 SIVA1O15304 175 aa9.64□□□□□ -0.87
PDGFRB-202ENST00000517488 SLC25A29Q8N8R3 303 aa9.64□□□□□ -0.87
PDGFRB-202ENST00000517488 TMSB15BA0A087X1C1 80 aa9.63□□□□□ -0.87
PDGFRB-202ENST00000517488 TRAV1-1A0A0B4J248 108 aa9.63□□□□□ -0.87
PDGFRB-202ENST00000517488 H3BVH4 76 aa9.63□□□□□ -0.87
PDGFRB-202ENST00000517488 RAB5CP51148 216 aa9.63□□□□□ -0.87
PDGFRB-202ENST00000517488 EIF5AL1Q6IS14 154 aaKnown RBP9.63□□□□□ -0.87
PDGFRB-202ENST00000517488 TXNDC17Q9BRA2 123 aa9.63□□□□□ -0.87
PDGFRB-202ENST00000517488 IL36BQ9NZH7 164 aa9.63□□□□□ -0.87
PDGFRB-202ENST00000517488 GNG13Q9P2W3 67 aa9.63□□□□□ -0.87
PDGFRB-202ENST00000517488 S100A9P06702 114 aaKnown RBP9.62□□□□□ -0.87
PDGFRB-202ENST00000517488 ARMS2P0C7Q2 107 aa9.62□□□□□ -0.87
PDGFRB-202ENST00000517488 SULT1A2P50226 295 aa9.62□□□□□ -0.87
PDGFRB-202ENST00000517488 LINC01559Q495D7 138 aa9.62□□□□□ -0.87
PDGFRB-202ENST00000517488 DNLZQ5SXM8 178 aa9.62□□□□□ -0.87
PDGFRB-202ENST00000517488 DMRTA1Q5VZB9 504 aa9.62□□□□□ -0.87
PDGFRB-202ENST00000517488 Q6ZSN1 163 aa9.62□□□□□ -0.87
PDGFRB-202ENST00000517488 AKAP14Q86UN6 197 aa9.62□□□□□ -0.87
PDGFRB-202ENST00000517488 SLC51BQ86UW2 128 aa9.62□□□□□ -0.87
PDGFRB-202ENST00000517488 JPT2Q9H910 190 aa9.62□□□□□ -0.87
PDGFRB-202ENST00000517488 CIDEAO60543 219 aa9.61□□□□□ -0.87
PDGFRB-202ENST00000517488 PIK3CD-AS1Q5SR53 167 aa9.61□□□□□ -0.87
PDGFRB-202ENST00000517488 BAGE2Q86Y30 109 aa9.61□□□□□ -0.87
PDGFRB-202ENST00000517488 WFDC10BQ8IUB3 73 aa9.61□□□□□ -0.87
PDGFRB-202ENST00000517488 C9orf62Q8N4C0 152 aa9.61□□□□□ -0.87
PDGFRB-202ENST00000517488 MLST8Q9BVC4 326 aa9.61□□□□□ -0.87
PDGFRB-202ENST00000517488 SAMD10Q9BYL1 202 aa9.61□□□□□ -0.87
PDGFRB-202ENST00000517488 PARLQ9H300 379 aa9.61□□□□□ -0.87
PDGFRB-202ENST00000517488 TRBV6-4A0A1B0GX49 114 aa9.6□□□□□ -0.87
PDGFRB-202ENST00000517488 A8MWV9 139 aa9.6□□□□□ -0.87
PDGFRB-202ENST00000517488 LINC00315P59091 139 aa9.6□□□□□ -0.87
PDGFRB-202ENST00000517488 RHOHQ15669 191 aa9.6□□□□□ -0.87
PDGFRB-202ENST00000517488 UFSP1Q6NVU6 142 aa9.6□□□□□ -0.87
PDGFRB-202ENST00000517488 PRADC1Q9BSG0 188 aa9.6□□□□□ -0.87
PDGFRB-202ENST00000517488 SCRT2Q9NQ03 307 aa9.6□□□□□ -0.87
PDGFRB-202ENST00000517488 MANBALQ9NQG1 85 aa9.6□□□□□ -0.87
PDGFRB-202ENST00000517488 HSPG2P98160 4391 aa9.59□□□□□ -0.87
PDGFRB-202ENST00000517488 MGST1P10620 155 aaKnown RBP9.59□□□□□ -0.87
PDGFRB-202ENST00000517488 RPL35P42766 123 aaKnown RBP9.59□□□□□ -0.87
PDGFRB-202ENST00000517488 RPL19P84098 196 aaKnown RBP9.59□□□□□ -0.87
PDGFRB-202ENST00000517488 ZFP2Q6ZN57 461 aa9.59□□□□□ -0.87
PDGFRB-202ENST00000517488 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
PDGFRB-202ENST00000517488 C11orf52Q96A22 123 aa9.59□□□□□ -0.87
PDGFRB-202ENST00000517488 DERL1Q9BUN8 251 aa9.59□□□□□ -0.87
PDGFRB-202ENST00000517488 TNFRSF18Q9Y5U5 241 aa9.59□□□□□ -0.87
PDGFRB-202ENST00000517488 APOBP04114 4563 aaKnown RBP9.58□□□□□ -0.88
PDGFRB-202ENST00000517488 BTF3P20290 206 aaKnown RBP9.58□□□□□ -0.88
PDGFRB-202ENST00000517488 TIRAPP58753 221 aa9.58□□□□□ -0.88
PDGFRB-202ENST00000517488 SYT8Q8NBV8 401 aa9.58□□□□□ -0.88
PDGFRB-202ENST00000517488 Q9UF83 564 aa9.58□□□□□ -0.88
PDGFRB-202ENST00000517488 PHLDA3Q9Y5J5 127 aa9.58□□□□□ -0.88
PDGFRB-202ENST00000517488 LY96Q9Y6Y9 160 aa9.58□□□□□ -0.88
PDGFRB-202ENST00000517488 TEX46H3BTG2 121 aa9.57□□□□□ -0.88
PDGFRB-202ENST00000517488 M0R381 172 aa9.57□□□□□ -0.88
PDGFRB-202ENST00000517488 PRR27Q6MZM9 219 aa9.57□□□□□ -0.88
PDGFRB-202ENST00000517488 Q6ZRN7 208 aaPredicted RBP9.57□□□□□ -0.88
PDGFRB-202ENST00000517488 C14orf178Q8N769 122 aaPredicted RBP9.57□□□□□ -0.88
PDGFRB-202ENST00000517488 A0A087WWL8 130 aa9.56□□□□□ -0.88
PDGFRB-202ENST00000517488 A0A1B0GVG6 124 aa9.56□□□□□ -0.88
PDGFRB-202ENST00000517488 GAGE12JA6NER3 117 aa9.56□□□□□ -0.88
PDGFRB-202ENST00000517488 DNAH10OSP0CZ25 163 aa9.56□□□□□ -0.88
PDGFRB-202ENST00000517488 GAGE1Q13065 139 aa9.56□□□□□ -0.88
PDGFRB-202ENST00000517488 GAGE4Q13068 117 aa9.56□□□□□ -0.88
PDGFRB-202ENST00000517488 GAGE5Q13069 117 aa9.56□□□□□ -0.88
PDGFRB-202ENST00000517488 GAGE13Q4V321 117 aa9.56□□□□□ -0.88
PDGFRB-202ENST00000517488 CENPWQ5EE01 88 aa9.56□□□□□ -0.88
PDGFRB-202ENST00000517488 SFRP2Q96HF1 295 aa9.56□□□□□ -0.88
PDGFRB-202ENST00000517488 RAB19A4D1S5 217 aa9.55□□□□□ -0.88
PDGFRB-202ENST00000517488 CRYGDP07320 174 aa9.55□□□□□ -0.88
PDGFRB-202ENST00000517488 LINC00694P0DN24 101 aa9.55□□□□□ -0.88
PDGFRB-202ENST00000517488 MEF2BQ02080 365 aaPredicted RBP9.55□□□□□ -0.88
PDGFRB-202ENST00000517488 FAM74A4Q5TZK3 123 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms