RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CFHR3Q02985 330 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 ANXA2RQ3ZCQ2 193 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 NEGR1Q7Z3B1 354 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 PCP2Q8IVA1 136 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 SIGMAR1Q99720 223 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 MLST8Q9BVC4 326 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 IGHV4-61A0A0C4DH41 118 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 NRGNQ92686 78 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 GTSF1LQ9H1H1 148 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 A0A1W2PPM0 123 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 IGHV4-59P01825 116 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 TMEM95Q3KNT9 176 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 ZNF625Q96I27 306 aaPredicted RBP8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 BOD1L1Q8NFC6 3051 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 TSPAN13O95857 204 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 LINC01549A6NIU2 74 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 NDUFA4O00483 81 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 C2orf66Q6UXQ4 117 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 DEFB121Q5J5C9 76 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 ADAMTSL5Q6ZMM2 481 aa8.47□□□□□ -1.05
PCDHGA1-202ENST00000517417 BLCAPP62952 87 aa8.46□□□□□ -1.05
PCDHGA1-202ENST00000517417 LINC01559Q495D7 138 aa8.46□□□□□ -1.05
PCDHGA1-202ENST00000517417 VWC2LB2RUY7 222 aa8.46□□□□□ -1.06
PCDHGA1-202ENST00000517417 CMC4P56277 68 aaPredicted RBP8.46□□□□□ -1.06
PCDHGA1-202ENST00000517417 DEFB112Q30KQ8 113 aa8.46□□□□□ -1.06
PCDHGA1-202ENST00000517417 C8orf31Q8N9H6 132 aa8.46□□□□□ -1.06
PCDHGA1-202ENST00000517417 IGKV1-17P01599 117 aa8.46□□□□□ -1.06
PCDHGA1-202ENST00000517417 CRPP02741 224 aa8.46□□□□□ -1.06
PCDHGA1-202ENST00000517417 TP53TG1Q9Y2A0 90 aa8.46□□□□□ -1.06
PCDHGA1-202ENST00000517417 RBMY1BA6NDE4 496 aaKnown RBP8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 RBMY1EA6NEQ0 496 aaKnown RBP8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 K7ERJ3 54 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 CRYGCP07315 174 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 RBMY1DP0C7P1 496 aaKnown RBP8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 RBMY1A1P0DJD3 496 aaKnown RBP8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 RBMY1CP0DJD4 496 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 HOXB4P17483 251 aaPredicted RBP8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 C1QTNF4Q9BXJ3 329 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 LINC00574Q9H8X3 128 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 LINC01619G3V211 115 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 MYCNOSP40205 109 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 MORN3Q6PF18 240 aaPredicted RBP8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 SDHAF1A6NFY7 115 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 TMEM238C9JI98 176 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 SIVA1O15304 175 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 PAX4O43316 350 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 DYNAPQ8N1N2 210 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 CENPVL3A0A0U1RRI6 287 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 I3L2K1 104 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 M0R2P5 195 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 CKS1BP61024 79 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 LOXL1Q08397 574 aaPredicted RBP8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 GAGE13Q4V321 117 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 DTX2Q86UW9 622 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 AGPAT4-IT1Q9H0P7 198 aa8.45□□□□□ -1.06
PCDHGA1-202ENST00000517417 IGHV4-30-2A0A087WSY4 118 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 IGHV4-38-2P0DP08 117 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 ADORA2A-AS1P86434 159 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 C6orf226Q5I0X4 101 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 OR11H6Q8NGC7 330 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 URB1-AS1Q96HZ7 61 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 GAGE12JA6NER3 117 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 GAGE4Q13068 117 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 GAGE5Q13069 117 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 DEFB136Q30KP8 78 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 ZFHX4Q86UP3 3567 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 IGHV7-81A0A0B4J1V7 117 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 IGHV3-38A0A0C4DH36 116 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 EGR2P11161 476 aaPredicted RBP8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 K7EIM0 57 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 FN1P02751 2386 aaKnown RBP8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 LY6G5BQ8NDX9 201 aa8.44□□□□□ -1.06
PCDHGA1-202ENST00000517417 PRIMA1Q86XR5 153 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 TMEM86BQ8N661 226 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 PLEKHB2Q96CS7 222 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 FOXE3Q13461 319 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 C22orf34Q6ZV56 151 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 C10orf126Q8N4M7 172 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 PRORYQ9H606 182 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 ZNF462Q96JM2 2506 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 IGHV7-4-1A0A0J9YVY3 117 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 A8MWV9 139 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 TEX22C9J3V5 150 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 DSCAML1Q8TD84 2053 aa8.43□□□□□ -1.06
PCDHGA1-202ENST00000517417 TRPT1Q86TN4 253 aaKnown RBP8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 BOD1L2Q8IYS8 172 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 Q8NA96 180 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 TIMM21Q9BVV7 248 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 TET2Q6N021 2002 aaPredicted RBP8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 C3orf56Q8N813 242 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 GNRH2O43555 120 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 GAGE7O76087 117 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 GAGE12FP0CL80 117 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 GAGE12GP0CL81 117 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 GAGE12IP0CL82 117 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 TTTY13Q9BZ97 58 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 PGPEP1Q9NXJ5 209 aa8.42□□□□□ -1.06
PCDHGA1-202ENST00000517417 DSPP15924 2871 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms