RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 TRACP01848 142 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 IL3P08700 152 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 NQO2P16083 231 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 PEX19P40855 299 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 POLR2JP52435 117 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 RPS29P62273 56 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 AKR1C8PQ5T2L2 129 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 FAM151BQ6UXP7 276 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 HEPN1Q6WQI6 88 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SSX6Q7RTT6 188 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 NDUFA11Q86Y39 141 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 FAM216BQ8N7L0 139 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TSEN15Q8WW01 171 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 IFT81Q8WYA0 676 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 PRTFDC1Q9NRG1 225 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 MPC1Q9Y5U8 109 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 FRMPD1Q5SYB0 1578 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 NKTRP30414 1462 aaKnown RBP-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 KIAA0232Q92628 1395 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 IBTKQ9P2D0 1353 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TRAV30A0A087WSZ9 112 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 A0A087WUJ7 227 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 ADAP1O75689 374 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 HLA-DRB1P01911 266 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TFF1P04155 84 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 IFNA4P05014 189 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 DYNLT3P51808 116 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 FLOT2Q14254 428 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 HSP90AA4PQ58FG1 418 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 BCL2L15Q5TBC7 163 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TNFAIP8L2Q6P589 184 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 COMMD1Q8N668 190 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 VSTM2AQ8TAG5 236 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LRRC20Q8TCA0 184 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 BRK1Q8WUW1 75 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 RASD2Q96D21 266 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 MSANTD3Q96H12 275 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 PRELID3AQ96N28 172 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CMSS1Q9BQ75 279 aaKnown RBP-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 MAP1LC3AQ9H492 121 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 HIGD1BQ9P298 99 aa-2.32□□□□□ -2.78
RNU6-1238P-201ENST00000517215 ANKRD31Q8N7Z5 1873 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 YTHDC2Q9H6S0 1430 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 RIMS2Q9UQ26 1411 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 NUP155O75694 1391 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TPD52L2O43399 206 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 GGCTO75223 188 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 HADHBP55084 474 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 ATP5IP56385 69 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 NDUFA6P56556 154 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 BTG2P78543 158 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SLAMF1Q13291 335 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 RRN3P1Q2M238 152 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CST9Q5W186 159 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 BLIDQ8IZY5 108 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LGALS14Q8TCE9 139 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CT55Q8WUE5 264 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 PPDPFLQ8WWR9 84 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 IFI27L1Q96BM0 104 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 EXO5Q9H790 373 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LINC00846Q9NV44 126 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 UQCC1Q9NVA1 299 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 AHSPQ9NZD4 102 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 MAGI2Q86UL8 1455 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CEP164Q9UPV0 1460 aa-2.33□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SYNJ2BP-COX16A0A087WUM0 186 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 hADV38S2A0JD32 116 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CCDC169A6NNP5 214 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 I3L3M4 83 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TMEM256-PLSCR3K7ERE1 68 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CCL22O00626 93 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CXCL11O14625 94 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 EDF1O60869 148 aaKnown RBP-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 HLA-DRAP01903 254 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TNP1P09430 55 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 GTF2A1P52655 376 aaPredicted RBP-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 DAOAP59103 153 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 MRPS36P82909 103 aaKnown RBP-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 MLLT11Q13015 90 aaPredicted RBP-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TMEM170BQ5T4T1 132 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 AHSA2Q719I0 299 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SLC51BQ86UW2 128 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 STX12Q86Y82 276 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TRAPPC5Q8IUR0 188 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CERS2Q96G23 380 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 MAP1LC3BQ9GZQ8 125 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CRIPTQ9P021 101 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 NDUFAF1Q9Y375 327 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 PTPRGP23470 1445 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TRAPPC8Q9Y2L5 1435 aa-2.34□□□□□ -2.78
RNU6-1238P-201ENST00000517215 K7EPI3 171 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 M0R135 149 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 KPNA4O00629 521 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 BIRC5O15392 142 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 SERPINA6P08185 405 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CYBAP13498 195 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 PVALBP20472 110 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 RPS20P60866 119 aaKnown RBP-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 IL18Q14116 193 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 C9orf116Q5BN46 136 aaPredicted RBP-2.35□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms