RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 CCL7P80098 99 aa-0.46□□□□□ -2.48
SCARNA1-201ENST00000517138 HIST2H3PS2Q5TEC6 136 aa-0.46□□□□□ -2.48
SCARNA1-201ENST00000517138 PSMF1Q92530 271 aa-0.46□□□□□ -2.48
SCARNA1-201ENST00000517138 BPESC1Q9GZL8 116 aa-0.46□□□□□ -2.48
SCARNA1-201ENST00000517138 C6orf62Q9GZU0 229 aaPredicted RBP-0.46□□□□□ -2.48
SCARNA1-201ENST00000517138 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.47□□□□□ -2.48
SCARNA1-201ENST00000517138 LRRN3E7EW58 273 aa-0.47□□□□□ -2.48
SCARNA1-201ENST00000517138 IFNA4P05014 189 aa-0.47□□□□□ -2.48
SCARNA1-201ENST00000517138 IFNA16P05015 189 aa-0.47□□□□□ -2.48
SCARNA1-201ENST00000517138 HIST1H1TP22492 207 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA1-201ENST00000517138 OGFRL1Q5TC84 451 aaPredicted RBP-0.47□□□□□ -2.48
SCARNA1-201ENST00000517138 ANKRD29Q8N6D5 301 aa-0.47□□□□□ -2.48
SCARNA1-201ENST00000517138 DDA1Q9BW61 102 aa-0.47□□□□□ -2.48
SCARNA1-201ENST00000517138 NUPR1O60356 82 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 ZNF682O95780 498 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 IGF2P01344 180 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 IFNA21P01568 189 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 IFNA17P01571 189 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 OR4E1P0C645 316 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 OCM2P0CE71 109 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 CRYGSP22914 178 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 KDELR1P24390 212 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 DEFB112Q30KQ8 113 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 FAM151BQ6UXP7 276 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 CT55Q8WUE5 264 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 NHP2Q9NX24 153 aaKnown RBP-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 TMEM56-RWDD3S4R434 201 aa-0.48□□□□□ -2.49
SCARNA1-201ENST00000517138 DEXIO95424 95 aa-0.49□□□□□ -2.49
SCARNA1-201ENST00000517138 ZNF137PP52743 207 aa-0.49□□□□□ -2.49
SCARNA1-201ENST00000517138 DEFA5Q01523 94 aa-0.49□□□□□ -2.49
SCARNA1-201ENST00000517138 ACOT6Q3I5F7 207 aaPredicted RBP-0.49□□□□□ -2.49
SCARNA1-201ENST00000517138 TTTY10Q9BZA0 68 aa-0.49□□□□□ -2.49
SCARNA1-201ENST00000517138 DCSTAMPQ9H295 470 aa-0.49□□□□□ -2.49
SCARNA1-201ENST00000517138 PSTPIP2Q9H939 334 aa-0.49□□□□□ -2.49
SCARNA1-201ENST00000517138 UTP11Q9Y3A2 253 aaKnown RBP-0.49□□□□□ -2.49
SCARNA1-201ENST00000517138 LSM5Q9Y4Y9 91 aaKnown RBP-0.49□□□□□ -2.49
SCARNA1-201ENST00000517138 FAM25EA8MYX2 175 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 H3BSH0 61 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 SLC16A4O15374 487 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 C12orf74Q32Q52 190 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 TRAPPC6BQ86SZ2 158 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 Q8IYB0 196 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 C20orf196Q8IYI0 205 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 TEX47Q8TBZ9 253 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 TSPAN32Q96QS1 320 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 DRC3Q9H069 523 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 C14orf105Q9NVL8 296 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 OPTCQ9UBM4 332 aa-0.5□□□□□ -2.49
SCARNA1-201ENST00000517138 A0A0A6YYH2 397 aa-0.51□□□□□ -2.49
SCARNA1-201ENST00000517138 C20orf202A1L168 122 aa-0.51□□□□□ -2.49
SCARNA1-201ENST00000517138 A6NJ64 397 aa-0.51□□□□□ -2.49
SCARNA1-201ENST00000517138 DEFB4AO15263 64 aa-0.51□□□□□ -2.49
SCARNA1-201ENST00000517138 ISG15P05161 165 aa-0.51□□□□□ -2.49
SCARNA1-201ENST00000517138 DEFB133Q30KQ1 61 aa-0.51□□□□□ -2.49
SCARNA1-201ENST00000517138 TEX29Q8N6K0 151 aa-0.51□□□□□ -2.49
SCARNA1-201ENST00000517138 ADAT3Q96EY9 351 aaPredicted RBP-0.51□□□□□ -2.49
SCARNA1-201ENST00000517138 BCL2L10Q9HD36 194 aa-0.51□□□□□ -2.49
SCARNA1-201ENST00000517138 TNFSF18Q9UNG2 199 aa-0.51□□□□□ -2.49
SCARNA1-201ENST00000517138 SMIM9A6NGZ8 99 aa-0.52□□□□□ -2.49
SCARNA1-201ENST00000517138 PSMD12O00232 456 aaPredicted RBP-0.52□□□□□ -2.49
SCARNA1-201ENST00000517138 PIRTP0C851 137 aa-0.52□□□□□ -2.49
SCARNA1-201ENST00000517138 S100A4P26447 101 aaKnown RBP-0.52□□□□□ -2.49
SCARNA1-201ENST00000517138 CD52P31358 61 aa-0.52□□□□□ -2.49
SCARNA1-201ENST00000517138 AP2S1P53680 142 aaPredicted RBP-0.52□□□□□ -2.49
SCARNA1-201ENST00000517138 FOXA3P55318 350 aaPredicted RBP-0.52□□□□□ -2.49
SCARNA1-201ENST00000517138 LINC00052Q96N35 136 aa-0.52□□□□□ -2.49
SCARNA1-201ENST00000517138 C14orf132Q9NPU4 83 aa-0.52□□□□□ -2.49
SCARNA1-201ENST00000517138 TRAV10A0A0B4J240 114 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 TRAV17A0A0B4J275 112 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 TCRBV4S1A1TA0A5B7 111 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 GADD45GO95257 159 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 CNIH1O95406 144 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 SMIM10L2AP0DMW4 78 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 SMIM10L2BP0DMW5 78 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 SPINT3P49223 89 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 SPCS3P61009 180 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 WFDC2Q14508 124 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 TSNQ15631 228 aaKnown RBP-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 C10orf99Q6UWK7 81 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 DEFB108BQ8NET1 73 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 C10orf82Q8WW14 230 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 WFDC10AQ9H1F0 79 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 ORMDL1Q9P0S3 153 aa-0.53□□□□□ -2.49
SCARNA1-201ENST00000517138 DHFRP00374 187 aa-0.54□□□□□ -2.5
SCARNA1-201ENST00000517138 TNNC2P02585 160 aa-0.54□□□□□ -2.5
SCARNA1-201ENST00000517138 DEFB135Q30KP9 77 aa-0.54□□□□□ -2.5
SCARNA1-201ENST00000517138 TMEM254Q8TBM7 123 aa-0.54□□□□□ -2.5
SCARNA1-201ENST00000517138 POP5Q969H6 163 aaKnown RBP-0.54□□□□□ -2.5
SCARNA1-201ENST00000517138 JPT1Q9UK76 154 aa-0.54□□□□□ -2.5
SCARNA1-201ENST00000517138 Q9Y3F1 56 aa-0.54□□□□□ -2.5
SCARNA1-201ENST00000517138 A0A087WSZ3 146 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 DEFB131BA0A096LNP1 70 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 C7orf71A4D174 169 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 OR4C46A6NHA9 309 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 AHSA1O95433 338 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 CRYZL1O95825 349 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 DEFB136Q30KP8 78 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 SPOPLQ6IQ16 392 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 C8orf74Q6P047 294 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 HAGHLQ6PII5 290 aaPredicted RBP-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms