RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 SMG6Q86US8 1419 aaKnown RBP0.47□□□□□ -2.33
RN7SKP88-201ENST00000516847 SPAG17Q6Q759 2223 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 MYH7P12883 1935 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 DLG5Q8TDM6 1919 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 KIF13AQ9H1H9 1805 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 TRAV23DV6A0A075B6W5 121 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 A0A1B0GV90 55 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 LYNX1P0DP58 116 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 FXYD4P59646 89 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 SPANXN1Q5VSR9 72 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 MIC13Q5XKP0 118 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 OR2T2Q6IF00 324 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 LINC00575Q6W349 94 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 Q6ZSA8 131 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 TMEM203Q969S6 136 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 ODF3Q96PU9 254 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 AMELYQ99218 206 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 CGREF1Q99674 301 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 PSMG3Q9BT73 122 aaPredicted RBP0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 KRTAP4-4Q9BYR3 166 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 ATG5Q9H1Y0 275 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 RERGLQ9H628 205 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 ASCC3Q8N3C0 2202 aaKnown RBP0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 NALCNQ8IZF0 1738 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 PEAK1Q9H792 1746 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 RIMS1Q86UR5 1692 aaKnown RBP0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 CTTNBP2Q8WZ74 1663 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 LRP5O75197 1615 aa0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 PHRF1Q9P1Y6 1649 aaKnown RBP0.46□□□□□ -2.34
RN7SKP88-201ENST00000516847 ROCK2O75116 1388 aaKnown RBP0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 IBTKQ9P2D0 1353 aaPredicted RBP0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 KIAA0100Q14667 2235 aaKnown RBP0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 LAMB1P07942 1786 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 MED12Q93074 2177 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 OBSCNQ5VST9 7968 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 TEX49A0A1B0GTD5 131 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 LINC00587B1AMM8 73 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 FAM25AB3EWG3 89 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 FAM25CB3EWG5 89 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 FAM25GB3EWG6 89 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 NDUFB6O95139 128 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 IFNGP01579 166 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 IGKCP01834 107 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 APOC1P02654 83 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 CCKP06307 115 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 SPTBP11277 2137 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 SLC25A6P12236 298 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 WHAMMP3Q1A5X7 153 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 MEIG1Q5JSS6 88 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 XAF1Q6GPH4 301 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 C10orf99Q6UWK7 81 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 PP6455Q8WZ26 134 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 TMEM141Q96I45 108 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 LIMD2Q9BT23 127 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 SPANXDQ9BXN6 97 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 KRTAP4-3Q9BYR4 195 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 AGPAT4-IT1Q9H0P7 198 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 NAA60Q9H7X0 242 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 NDUFA12Q9UI09 145 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 CFTRP13569 1480 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 ZNF142P52746 1687 aaPredicted RBP0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 DAPK1P53355 1430 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 SPEF2Q9C093 1822 aa0.45□□□□□ -2.34
RN7SKP88-201ENST00000516847 PHLPP1O60346 1717 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 FAM135AQ9P2D6 1515 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 E9PCH4 1651 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 PTPRMP28827 1452 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 MBD5Q9P267 1494 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 TRAV17A0A0B4J275 112 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 NBDYA0A0U1RRE5 68 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 MIF4GDA9UHW6 222 aaKnown RBP0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 M0R129 80 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 CORTO00230 105 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 NCR3O14931 201 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 TNFP01375 233 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 IL5P05113 134 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 PIRTP0C851 137 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 PIPP12273 146 aaPredicted RBP0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 IL7P13232 177 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 EFNA4P52798 201 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 RPL37AP61513 92 aaKnown RBP0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 Q56UQ5 140 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 C9orf116Q5BN46 136 aaPredicted RBP0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 C12orf73Q69YU5 71 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 SLC48A1Q6P1K1 146 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 Q6ZQY7 126 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 PPP1R1CQ8WVI7 109 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 SPTSSAQ969W0 71 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 PDCD10Q9BUL8 212 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 TMEM242Q9NWH2 141 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 KDM6BO15054 1643 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 BLMP54132 1417 aaPredicted RBP0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 DLEC1Q9Y238 1755 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 COL6A6A6NMZ7 2263 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 EIF4G3O43432 1585 aaKnown RBP0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 MUC6Q6W4X9 2439 aa0.44□□□□□ -2.34
RN7SKP88-201ENST00000516847 ASH1LQ9NR48 2969 aaKnown RBP0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 ZNF518AQ6AHZ1 1483 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 PIGBOS1A0A0B4J2F0 54 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms