RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 IFITM3Q01628 133 aa12.17□□□□□ -0.46
SPOP-220ENST00000515508 OR10G9Q8NGN4 311 aa12.17□□□□□ -0.46
SPOP-220ENST00000515508 OR10G7Q8NGN6 311 aa12.17□□□□□ -0.46
SPOP-220ENST00000515508 SUN5Q8TC36 379 aa12.17□□□□□ -0.46
SPOP-220ENST00000515508 TRAV8-3A0A0A6YYJ7 113 aa12.16□□□□□ -0.46
SPOP-220ENST00000515508 STAG3L2P0CL84 134 aa12.16□□□□□ -0.46
SPOP-220ENST00000515508 STAG3L3P0CL85 134 aa12.16□□□□□ -0.46
SPOP-220ENST00000515508 LINC00528Q8N1L1 170 aa12.16□□□□□ -0.46
SPOP-220ENST00000515508 SH3BGRL3Q9H299 93 aa12.16□□□□□ -0.46
SPOP-220ENST00000515508 PSG8Q9UQ74 426 aa12.16□□□□□ -0.46
SPOP-220ENST00000515508 KRTAP29-1A8MX34 341 aaPredicted RBP12.15□□□□□ -0.46
SPOP-220ENST00000515508 K7EQM0 130 aa12.15□□□□□ -0.46
SPOP-220ENST00000515508 SSNA1O43805 119 aa12.15□□□□□ -0.46
SPOP-220ENST00000515508 CDC34P49427 236 aaPredicted RBP12.15□□□□□ -0.46
SPOP-220ENST00000515508 ZFP2Q6ZN57 461 aa12.15□□□□□ -0.46
SPOP-220ENST00000515508 PARLQ9H300 379 aa12.15□□□□□ -0.46
SPOP-220ENST00000515508 FLI1Q01543 452 aaPredicted RBP12.14□□□□□ -0.47
SPOP-220ENST00000515508 ZFP69Q49AA0 526 aa12.14□□□□□ -0.47
SPOP-220ENST00000515508 SMUG1Q53HV7 270 aa12.14□□□□□ -0.47
SPOP-220ENST00000515508 PIK3CD-AS1Q5SR53 167 aa12.14□□□□□ -0.47
SPOP-220ENST00000515508 OR2G3Q8NGZ4 309 aa12.14□□□□□ -0.47
SPOP-220ENST00000515508 A8MWV9 139 aa12.13□□□□□ -0.47
SPOP-220ENST00000515508 TOR2AQ5JU69 321 aa12.13□□□□□ -0.47
SPOP-220ENST00000515508 DAZ4Q86SG3 579 aaKnown RBP12.13□□□□□ -0.47
SPOP-220ENST00000515508 CYB561D1Q8N8Q1 229 aa12.13□□□□□ -0.47
SPOP-220ENST00000515508 DAZ3Q9NR90 486 aaKnown RBP12.13□□□□□ -0.47
SPOP-220ENST00000515508 GAGE12JA6NER3 117 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 GGTLC3B5MD39 225 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 LECT2O14960 151 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 GCHFRP30047 84 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 GAGE1Q13065 139 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 GAGE4Q13068 117 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 GAGE5Q13069 117 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 GAGE13Q4V321 117 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 DEFB104AQ8WTQ1 72 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 RAB24Q969Q5 203 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 LINC00479Q96M42 142 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 COX11Q9Y6N1 276 aa12.12□□□□□ -0.47
SPOP-220ENST00000515508 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.11□□□□□ -0.47
SPOP-220ENST00000515508 SAPCD1Q5SSQ6 148 aa12.11□□□□□ -0.47
SPOP-220ENST00000515508 UFSP1Q6NVU6 142 aa12.11□□□□□ -0.47
SPOP-220ENST00000515508 PRNTQ86SH4 94 aa12.11□□□□□ -0.47
SPOP-220ENST00000515508 PSMG3Q9BT73 122 aaPredicted RBP12.11□□□□□ -0.47
SPOP-220ENST00000515508 EPDR1Q9UM22 224 aa12.11□□□□□ -0.47
SPOP-220ENST00000515508 A0A087WWC5 75 aa12.1□□□□□ -0.47
SPOP-220ENST00000515508 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
SPOP-220ENST00000515508 SUMO1P63165 101 aaKnown RBP12.1□□□□□ -0.47
SPOP-220ENST00000515508 SCXQ7RTU7 201 aa12.1□□□□□ -0.47
SPOP-220ENST00000515508 Q9UF83 564 aa12.1□□□□□ -0.47
SPOP-220ENST00000515508 HSD17B11Q8NBQ5 300 aa12.09□□□□□ -0.47
SPOP-220ENST00000515508 TMEM167BQ9NRX6 74 aa12.09□□□□□ -0.47
SPOP-220ENST00000515508 S100A4P26447 101 aaKnown RBP12.08□□□□□ -0.48
SPOP-220ENST00000515508 FGF8P55075 233 aaPredicted RBP12.08□□□□□ -0.48
SPOP-220ENST00000515508 LGALSLQ3ZCW2 172 aaPredicted RBP12.08□□□□□ -0.48
SPOP-220ENST00000515508 OR2T35Q8NGX2 323 aa12.08□□□□□ -0.48
SPOP-220ENST00000515508 BAALCQ8WXS3 180 aa12.08□□□□□ -0.48
SPOP-220ENST00000515508 IL36BQ9NZH7 164 aa12.08□□□□□ -0.48
SPOP-220ENST00000515508 LRP1Q07954 4544 aaKnown RBP12.07□□□□□ -0.48
SPOP-220ENST00000515508 CXorf1O96002 111 aa12.07□□□□□ -0.48
SPOP-220ENST00000515508 MBP02144 154 aa12.07□□□□□ -0.48
SPOP-220ENST00000515508 ATP6V0CP27449 155 aa12.07□□□□□ -0.48
SPOP-220ENST00000515508 ASIPP42127 132 aa12.07□□□□□ -0.48
SPOP-220ENST00000515508 KRTAP10-4P60372 401 aaPredicted RBP12.07□□□□□ -0.48
SPOP-220ENST00000515508 SERF2P84101 59 aa12.07□□□□□ -0.48
SPOP-220ENST00000515508 LINC01620Q4KN68 170 aa12.07□□□□□ -0.48
SPOP-220ENST00000515508 C14orf178Q8N769 122 aaPredicted RBP12.07□□□□□ -0.48
SPOP-220ENST00000515508 RMI2Q96E14 147 aa12.07□□□□□ -0.48
SPOP-220ENST00000515508 SAMD10Q9BYL1 202 aa12.07□□□□□ -0.48
SPOP-220ENST00000515508 JPT2Q9H910 190 aa12.07□□□□□ -0.48
SPOP-220ENST00000515508 A0A1W2PRE2 83 aa12.06□□□□□ -0.48
SPOP-220ENST00000515508 NIT1Q86X76 327 aa12.06□□□□□ -0.48
SPOP-220ENST00000515508 Q8N976 141 aa12.06□□□□□ -0.48
SPOP-220ENST00000515508 ARL2-SNX15V9GYD0 113 aa12.06□□□□□ -0.48
SPOP-220ENST00000515508 RNF222A6NCQ9 220 aa12.05□□□□□ -0.48
SPOP-220ENST00000515508 FABP5P3A8MUU1 101 aa12.05□□□□□ -0.48
SPOP-220ENST00000515508 RHODO00212 210 aa12.05□□□□□ -0.48
SPOP-220ENST00000515508 SEC11BP0C7V7 166 aa12.05□□□□□ -0.48
SPOP-220ENST00000515508 DEFA1P59665 94 aa12.05□□□□□ -0.48
SPOP-220ENST00000515508 DEFA3P59666 94 aa12.05□□□□□ -0.48
SPOP-220ENST00000515508 DNLZQ5SXM8 178 aa12.05□□□□□ -0.48
SPOP-220ENST00000515508 AQP10Q96PS8 301 aa12.05□□□□□ -0.48
SPOP-220ENST00000515508 CHAC1Q9BUX1 264 aa12.05□□□□□ -0.48
SPOP-220ENST00000515508 TRAV34A0A0B4J273 112 aa12.04□□□□□ -0.48
SPOP-220ENST00000515508 RBFOX3A6NFN3 312 aa12.04□□□□□ -0.48
SPOP-220ENST00000515508 H3BVH4 76 aa12.04□□□□□ -0.48
SPOP-220ENST00000515508 DMRTA1Q5VZB9 504 aa12.04□□□□□ -0.48
SPOP-220ENST00000515508 DNAJC30Q96LL9 226 aa12.04□□□□□ -0.48
SPOP-220ENST00000515508 TNFSF18Q9UNG2 199 aa12.04□□□□□ -0.48
SPOP-220ENST00000515508 URGCP-MRPS24S4R325 110 aa12.04□□□□□ -0.48
SPOP-220ENST00000515508 IGKV2D-24A0A075B6R9 120 aa12.03□□□□□ -0.48
SPOP-220ENST00000515508 ATRAIDQ6UW56 229 aa12.03□□□□□ -0.48
SPOP-220ENST00000515508 Q86TA4 180 aa12.03□□□□□ -0.48
SPOP-220ENST00000515508 CHCHD7Q9BUK0 85 aa12.03□□□□□ -0.48
SPOP-220ENST00000515508 ACTR3CQ9C0K3 210 aaPredicted RBP12.03□□□□□ -0.48
SPOP-220ENST00000515508 HMCN2Q8NDA2 5059 aa12.03□□□□□ -0.48
SPOP-220ENST00000515508 B4DEV8 164 aa12.02□□□□□ -0.49
SPOP-220ENST00000515508 SYT8Q8NBV8 401 aa12.02□□□□□ -0.49
SPOP-220ENST00000515508 CIRBP-AS1Q8TBR5 109 aa12.02□□□□□ -0.49
SPOP-220ENST00000515508 KLK12Q9UKR0 248 aa12.02□□□□□ -0.49
SPOP-220ENST00000515508 KRBOX1C9JBD0 128 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms