RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 OR10D4PQ8NGN7 298 aa9.44□□□□□ -0.9
PVT1-203ENST00000513868 URB1-AS1Q96HZ7 61 aa9.44□□□□□ -0.9
PVT1-203ENST00000513868 FBN1P35555 2871 aaKnown RBP9.44□□□□□ -0.9
PVT1-203ENST00000513868 CD7P09564 240 aa9.43□□□□□ -0.9
PVT1-203ENST00000513868 RAB4AP20338 218 aa9.43□□□□□ -0.9
PVT1-203ENST00000513868 EVI2AP22794 236 aa9.43□□□□□ -0.9
PVT1-203ENST00000513868 S100A4P26447 101 aaKnown RBP9.43□□□□□ -0.9
PVT1-203ENST00000513868 KRTAP24-1Q3LI83 254 aa9.43□□□□□ -0.9
PVT1-203ENST00000513868 FAM110AQ9BQ89 295 aa9.43□□□□□ -0.9
PVT1-203ENST00000513868 TIMM8BQ9Y5J9 83 aaPredicted RBP9.43□□□□□ -0.9
PVT1-203ENST00000513868 NOTCH3Q9UM47 2321 aa9.43□□□□□ -0.9
PVT1-203ENST00000513868 MAST4O15021 2626 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 IGHV1OR15-1A0A075B7D0 117 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 IGHV3-16A0A0C4DH30 117 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 NXPH4O95158 308 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 SPANXN1Q5VSR9 72 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 TRPT1Q86TN4 253 aaKnown RBP9.42□□□□□ -0.9
PVT1-203ENST00000513868 Q8N1Y9 231 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 PACRGQ96M98 296 aaPredicted RBP9.42□□□□□ -0.9
PVT1-203ENST00000513868 D6R8Y8 96 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 CMC4P56277 68 aaPredicted RBP9.42□□□□□ -0.9
PVT1-203ENST00000513868 TMEM18Q96B42 140 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 C9orf85Q96MD7 179 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 MDFICQ9P1T7 246 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 PHLDA3Q9Y5J5 127 aa9.42□□□□□ -0.9
PVT1-203ENST00000513868 M0R381 172 aa9.41□□□□□ -0.9
PVT1-203ENST00000513868 GAS8-AS1O95177 125 aa9.41□□□□□ -0.9
PVT1-203ENST00000513868 NIT1Q86X76 327 aa9.41□□□□□ -0.9
PVT1-203ENST00000513868 WFDC10AQ9H1F0 79 aa9.41□□□□□ -0.9
PVT1-203ENST00000513868 SMKR1H3BMG3 65 aa9.4□□□□□ -0.9
PVT1-203ENST00000513868 STHQ8IWL8 128 aa9.4□□□□□ -0.9
PVT1-203ENST00000513868 ORMDL3Q8N138 153 aa9.4□□□□□ -0.9
PVT1-203ENST00000513868 NACAE9PAV3 2078 aa9.4□□□□□ -0.91
PVT1-203ENST00000513868 PYY3Q5JQD4 70 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 PRIMA1Q86XR5 153 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 PRELID3AQ96N28 172 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 STAB1Q9NY15 2570 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 NCR2O95944 276 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 NPYP01303 97 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 PRM2P04554 102 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 SMIM6P0DI80 62 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 CKS2P33552 79 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 INSL3P51460 131 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 C12orf57Q99622 126 aa9.39□□□□□ -0.91
PVT1-203ENST00000513868 TRRAPQ9Y4A5 3859 aa9.38□□□□□ -0.91
PVT1-203ENST00000513868 PPBPP02775 128 aa9.38□□□□□ -0.91
PVT1-203ENST00000513868 GIG44P09565 113 aaPredicted RBP9.38□□□□□ -0.91
PVT1-203ENST00000513868 C9orf66Q5T8R8 295 aa9.38□□□□□ -0.91
PVT1-203ENST00000513868 RNASEKQ6P5S7 137 aaKnown RBP9.38□□□□□ -0.91
PVT1-203ENST00000513868 FAM19A2Q8N3H0 131 aa9.38□□□□□ -0.91
PVT1-203ENST00000513868 C20orf144Q9BQM9 153 aa9.38□□□□□ -0.91
PVT1-203ENST00000513868 LINC00467Q9BRT7 94 aa9.38□□□□□ -0.91
PVT1-203ENST00000513868 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
PVT1-203ENST00000513868 KIF25-AS1Q9Y6Z4 181 aa9.38□□□□□ -0.91
PVT1-203ENST00000513868 INSP01308 110 aa9.37□□□□□ -0.91
PVT1-203ENST00000513868 LINC00614P0C842 121 aa9.37□□□□□ -0.91
PVT1-203ENST00000513868 GATA1P15976 413 aaPredicted RBP9.37□□□□□ -0.91
PVT1-203ENST00000513868 LINC00315P59091 139 aa9.37□□□□□ -0.91
PVT1-203ENST00000513868 SMIM15Q7Z3B0 74 aa9.37□□□□□ -0.91
PVT1-203ENST00000513868 C14orf178Q8N769 122 aaPredicted RBP9.37□□□□□ -0.91
PVT1-203ENST00000513868 WFDC9Q8NEX5 89 aa9.37□□□□□ -0.91
PVT1-203ENST00000513868 CHCHD1Q96BP2 118 aaKnown RBP9.37□□□□□ -0.91
PVT1-203ENST00000513868 SAMD10Q9BYL1 202 aa9.37□□□□□ -0.91
PVT1-203ENST00000513868 TRGV11A0A075B6L2 103 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 CBY3A6NI87 242 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 PMCHP20382 165 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 AMTP48728 403 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 Q6ZWC4 215 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 C1orf158Q8N1D5 194 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 POM121L12Q8N7R1 296 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 DPH3P1Q9H4G8 78 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 TRAV26-2A0A0B4J265 109 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 HSBP1O75506 76 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 IFI27P40305 119 aaPredicted RBP9.36□□□□□ -0.91
PVT1-203ENST00000513868 CDPF1Q6NVV7 123 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 NRACQ8N912 160 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 ZNF747Q9BV97 191 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 JPT2Q9H910 190 aa9.36□□□□□ -0.91
PVT1-203ENST00000513868 LOC389332A0A1B0GUA5 103 aa9.35□□□□□ -0.91
PVT1-203ENST00000513868 TNFRSF6BO95407 300 aa9.35□□□□□ -0.91
PVT1-203ENST00000513868 HTN1P15515 57 aa9.35□□□□□ -0.91
PVT1-203ENST00000513868 JOSD1Q15040 202 aaPredicted RBP9.35□□□□□ -0.91
PVT1-203ENST00000513868 AP1S3Q96PC3 154 aa9.35□□□□□ -0.91
PVT1-203ENST00000513868 LINC01587Q99440 93 aa9.35□□□□□ -0.91
PVT1-203ENST00000513868 LAMTOR2Q9Y2Q5 125 aa9.35□□□□□ -0.91
PVT1-203ENST00000513868 NUTF2P61970 127 aaKnown RBP9.34□□□□□ -0.91
PVT1-203ENST00000513868 PMCHL1Q16048 86 aa9.34□□□□□ -0.91
PVT1-203ENST00000513868 DEFB125Q8N687 156 aa9.34□□□□□ -0.91
PVT1-203ENST00000513868 C11orf72Q8NBR9 251 aa9.34□□□□□ -0.91
PVT1-203ENST00000513868 MRAP2Q96G30 205 aa9.34□□□□□ -0.91
PVT1-203ENST00000513868 PKD1L1Q8TDX9 2849 aa9.33□□□□□ -0.92
PVT1-203ENST00000513868 IGHV1-24A0A0C4DH33 117 aa9.33□□□□□ -0.92
PVT1-203ENST00000513868 WIPF1O43516 503 aa9.33□□□□□ -0.92
PVT1-203ENST00000513868 RPL35AP18077 110 aaKnown RBP9.33□□□□□ -0.92
PVT1-203ENST00000513868 PRSS3P2Q8NHM4 247 aa9.33□□□□□ -0.92
PVT1-203ENST00000513868 PRSS47A8MTI9 375 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 IGLL1P15814 213 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 AZU1P20160 251 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 SYT8Q8NBV8 401 aa9.32□□□□□ -0.92
PVT1-203ENST00000513868 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms