RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 RPL35P42766 123 aaKnown RBP9.67□□□□□ -0.86
DDX41-212ENST00000511040 FAM3BP58499 235 aaPredicted RBP9.67□□□□□ -0.86
DDX41-212ENST00000511040 SLAQ13239 276 aa9.67□□□□□ -0.86
DDX41-212ENST00000511040 ZNF674Q2M3X9 581 aa9.67□□□□□ -0.86
DDX41-212ENST00000511040 ZNF506Q5JVG8 444 aa9.67□□□□□ -0.86
DDX41-212ENST00000511040 ICOSQ9Y6W8 199 aa9.67□□□□□ -0.86
DDX41-212ENST00000511040 GYPEP15421 78 aa9.66□□□□□ -0.86
DDX41-212ENST00000511040 CFAP126Q5VTH2 177 aa9.66□□□□□ -0.86
DDX41-212ENST00000511040 Q6ZR54 194 aa9.66□□□□□ -0.86
DDX41-212ENST00000511040 C11orf52Q96A22 123 aa9.66□□□□□ -0.86
DDX41-212ENST00000511040 LOC100131303A0A0U1RQF7 123 aa9.65□□□□□ -0.86
DDX41-212ENST00000511040 RAB19A4D1S5 217 aa9.65□□□□□ -0.86
DDX41-212ENST00000511040 RS1O15537 224 aa9.65□□□□□ -0.86
DDX41-212ENST00000511040 IFNA1P01562 189 aa9.65□□□□□ -0.86
DDX41-212ENST00000511040 ARMS2P0C7Q2 107 aa9.65□□□□□ -0.86
DDX41-212ENST00000511040 BCL2P10415 239 aa9.65□□□□□ -0.86
DDX41-212ENST00000511040 RPL19P84098 196 aaKnown RBP9.65□□□□□ -0.86
DDX41-212ENST00000511040 MEF2BQ02080 365 aaPredicted RBP9.65□□□□□ -0.86
DDX41-212ENST00000511040 PRR27Q6MZM9 219 aa9.65□□□□□ -0.86
DDX41-212ENST00000511040 ZNF575Q86XF7 245 aa9.65□□□□□ -0.86
DDX41-212ENST00000511040 FRAS1Q86XX4 4008 aa9.64□□□□□ -0.87
DDX41-212ENST00000511040 MRPL23Q16540 153 aaKnown RBP9.64□□□□□ -0.87
DDX41-212ENST00000511040 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
DDX41-212ENST00000511040 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
DDX41-212ENST00000511040 TEX261Q6UWH6 196 aa9.64□□□□□ -0.87
DDX41-212ENST00000511040 PCNPQ8WW12 178 aaKnown RBP9.64□□□□□ -0.87
DDX41-212ENST00000511040 PTH2Q96A98 100 aa9.64□□□□□ -0.87
DDX41-212ENST00000511040 MLST8Q9BVC4 326 aa9.64□□□□□ -0.87
DDX41-212ENST00000511040 Q9H8V8 135 aa9.64□□□□□ -0.87
DDX41-212ENST00000511040 IL36BQ9NZH7 164 aa9.64□□□□□ -0.87
DDX41-212ENST00000511040 MRPS16Q9Y3D3 137 aaKnown RBP9.64□□□□□ -0.87
DDX41-212ENST00000511040 NBDYA0A0U1RRE5 68 aa9.63□□□□□ -0.87
DDX41-212ENST00000511040 K7EQD1 137 aa9.63□□□□□ -0.87
DDX41-212ENST00000511040 RTL8CO15255 209 aa9.63□□□□□ -0.87
DDX41-212ENST00000511040 GATA1P15976 413 aaPredicted RBP9.63□□□□□ -0.87
DDX41-212ENST00000511040 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
DDX41-212ENST00000511040 TXNDC17Q9BRA2 123 aa9.63□□□□□ -0.87
DDX41-212ENST00000511040 JPT2Q9H910 190 aa9.63□□□□□ -0.87
DDX41-212ENST00000511040 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
DDX41-212ENST00000511040 VAX2Q9UIW0 290 aa9.63□□□□□ -0.87
DDX41-212ENST00000511040 PDE6DO43924 150 aa9.62□□□□□ -0.87
DDX41-212ENST00000511040 MGST1P10620 155 aaKnown RBP9.62□□□□□ -0.87
DDX41-212ENST00000511040 SRIP30626 198 aa9.62□□□□□ -0.87
DDX41-212ENST00000511040 BLOC1S1P78537 153 aa9.62□□□□□ -0.87
DDX41-212ENST00000511040 DNLZQ5SXM8 178 aa9.62□□□□□ -0.87
DDX41-212ENST00000511040 LYPD5Q6UWN5 251 aa9.62□□□□□ -0.87
DDX41-212ENST00000511040 NEGR1Q7Z3B1 354 aa9.62□□□□□ -0.87
DDX41-212ENST00000511040 SAMD10Q9BYL1 202 aa9.62□□□□□ -0.87
DDX41-212ENST00000511040 PARLQ9H300 379 aa9.62□□□□□ -0.87
DDX41-212ENST00000511040 M0R381 172 aa9.61□□□□□ -0.87
DDX41-212ENST00000511040 NXPH4O95158 308 aa9.61□□□□□ -0.87
DDX41-212ENST00000511040 Q6ZSN1 163 aa9.61□□□□□ -0.87
DDX41-212ENST00000511040 SLC25A29Q8N8R3 303 aa9.61□□□□□ -0.87
DDX41-212ENST00000511040 SYT8Q8NBV8 401 aa9.61□□□□□ -0.87
DDX41-212ENST00000511040 UPK3BQ9BT76 320 aa9.61□□□□□ -0.87
DDX41-212ENST00000511040 PHLDA3Q9Y5J5 127 aa9.61□□□□□ -0.87
DDX41-212ENST00000511040 MUC21A0A0G2JKD1 596 aa9.6□□□□□ -0.87
DDX41-212ENST00000511040 MUC21A0A140T8X8 626 aa9.6□□□□□ -0.87
DDX41-212ENST00000511040 A8MWV9 139 aa9.6□□□□□ -0.87
DDX41-212ENST00000511040 IGLV2-8P01709 118 aa9.6□□□□□ -0.87
DDX41-212ENST00000511040 GNG4P50150 75 aa9.6□□□□□ -0.87
DDX41-212ENST00000511040 C1orf134Q5TEV5 83 aa9.6□□□□□ -0.87
DDX41-212ENST00000511040 KRTAP1-5Q9BYS1 174 aa9.6□□□□□ -0.87
DDX41-212ENST00000511040 SCRT2Q9NQ03 307 aa9.6□□□□□ -0.87
DDX41-212ENST00000511040 TRBV20OR9-2A0A075B6H5 130 aa9.59□□□□□ -0.87
DDX41-212ENST00000511040 A0A087WWL8 130 aa9.59□□□□□ -0.87
DDX41-212ENST00000511040 TAGLN2P37802 199 aaKnown RBP9.59□□□□□ -0.87
DDX41-212ENST00000511040 PRADC1Q9BSG0 188 aa9.59□□□□□ -0.87
DDX41-212ENST00000511040 RBFOX3A6NFN3 312 aa9.58□□□□□ -0.88
DDX41-212ENST00000511040 PRSS29PA6NIE9 313 aa9.58□□□□□ -0.88
DDX41-212ENST00000511040 CIDEAO60543 219 aa9.58□□□□□ -0.88
DDX41-212ENST00000511040 SSTP61278 116 aa9.58□□□□□ -0.88
DDX41-212ENST00000511040 RHOHQ15669 191 aa9.58□□□□□ -0.88
DDX41-212ENST00000511040 PIK3CD-AS1Q5SR53 167 aa9.58□□□□□ -0.88
DDX41-212ENST00000511040 FAM74A4Q5TZK3 123 aa9.58□□□□□ -0.88
DDX41-212ENST00000511040 LINC00336Q6ZUF6 198 aa9.58□□□□□ -0.88
DDX41-212ENST00000511040 ZFP82Q8N141 532 aa9.58□□□□□ -0.88
DDX41-212ENST00000511040 OR10AG1Q8NH19 301 aa9.58□□□□□ -0.88
DDX41-212ENST00000511040 TRBV6-4A0A1B0GX49 114 aa9.57□□□□□ -0.88
DDX41-212ENST00000511040 GZMBP10144 247 aa9.57□□□□□ -0.88
DDX41-212ENST00000511040 SOHLH1Q5JUK2 328 aa9.57□□□□□ -0.88
DDX41-212ENST00000511040 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
DDX41-212ENST00000511040 ZFP2Q6ZN57 461 aa9.57□□□□□ -0.88
DDX41-212ENST00000511040 C14orf178Q8N769 122 aaPredicted RBP9.57□□□□□ -0.88
DDX41-212ENST00000511040 LYPD6BQ8NI32 183 aa9.57□□□□□ -0.88
DDX41-212ENST00000511040 DAZAP1Q96EP5 407 aaKnown RBP9.57□□□□□ -0.88
DDX41-212ENST00000511040 SFRP2Q96HF1 295 aa9.57□□□□□ -0.88
DDX41-212ENST00000511040 Q9UF83 564 aa9.57□□□□□ -0.88
DDX41-212ENST00000511040 DNAH2Q9P225 4427 aa9.57□□□□□ -0.88
DDX41-212ENST00000511040 DNAH17Q9UFH2 4485 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 GAGE12JA6NER3 117 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 SIVA1O15304 175 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 MED14OSP0DP75 135 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 CEBPGP53567 150 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 GAGE1Q13065 139 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 GAGE4Q13068 117 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 GAGE5Q13069 117 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 GAGE13Q4V321 117 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 TTC32Q5I0X7 151 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 TOR2AQ5JU69 321 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms