RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 OR2T35Q8NGX2 323 aa10.5□□□□□ -0.73
CXCL1-202ENST00000509101 CIRBP-AS1Q8TBR5 109 aa10.5□□□□□ -0.73
CXCL1-202ENST00000509101 TVP23CQ96ET8 276 aa10.5□□□□□ -0.73
CXCL1-202ENST00000509101 KCNS1Q96KK3 526 aa10.5□□□□□ -0.73
CXCL1-202ENST00000509101 FXYD6-FXYD2A0A087WZ82 144 aa10.49□□□□□ -0.73
CXCL1-202ENST00000509101 TRAV8-1A0A0A6YYK1 113 aa10.49□□□□□ -0.73
CXCL1-202ENST00000509101 RNF222A6NCQ9 220 aa10.49□□□□□ -0.73
CXCL1-202ENST00000509101 KHDC3LQ587J8 217 aa10.49□□□□□ -0.73
CXCL1-202ENST00000509101 CMTM2Q8TAZ6 248 aa10.49□□□□□ -0.73
CXCL1-202ENST00000509101 TREM1Q9NP99 234 aa10.49□□□□□ -0.73
CXCL1-202ENST00000509101 OTORQ9NRC9 128 aa10.49□□□□□ -0.73
CXCL1-202ENST00000509101 PGPA6NDG6 321 aa10.48□□□□□ -0.73
CXCL1-202ENST00000509101 SMLR1H3BR10 107 aa10.48□□□□□ -0.73
CXCL1-202ENST00000509101 CIDEAO60543 219 aa10.48□□□□□ -0.73
CXCL1-202ENST00000509101 RAB2AP61019 212 aa10.48□□□□□ -0.73
CXCL1-202ENST00000509101 TOR2AQ5JU69 321 aa10.48□□□□□ -0.73
CXCL1-202ENST00000509101 TNFSF18Q9UNG2 199 aa10.48□□□□□ -0.73
CXCL1-202ENST00000509101 GGTLC3B5MD39 225 aa10.47□□□□□ -0.73
CXCL1-202ENST00000509101 MGST1P10620 155 aaKnown RBP10.47□□□□□ -0.73
CXCL1-202ENST00000509101 ZNF506Q5JVG8 444 aa10.47□□□□□ -0.73
CXCL1-202ENST00000509101 HSD17B11Q8NBQ5 300 aa10.47□□□□□ -0.73
CXCL1-202ENST00000509101 GAGE12JA6NER3 117 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 ATP6V0CP27449 155 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 TAS2R45P59539 299 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 GNG5P63218 68 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 GAGE1Q13065 139 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 GAGE4Q13068 117 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 GAGE5Q13069 117 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 GAGE13Q4V321 117 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 FAM74A1Q5RGS3 127 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 C9orf85Q96MD7 179 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 C11orf21Q9P2W6 132 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 COX11Q9Y6N1 276 aa10.46□□□□□ -0.73
CXCL1-202ENST00000509101 IGKV2D-24A0A075B6R9 120 aa10.45□□□□□ -0.74
CXCL1-202ENST00000509101 PGPEP1LA6NFU8 196 aa10.45□□□□□ -0.74
CXCL1-202ENST00000509101 IGLV2-8P01709 118 aa10.45□□□□□ -0.74
CXCL1-202ENST00000509101 LINC00694P0DN24 101 aa10.45□□□□□ -0.74
CXCL1-202ENST00000509101 RPL7L1Q6DKI1 246 aaKnown RBP10.45□□□□□ -0.74
CXCL1-202ENST00000509101 Q8N976 141 aa10.45□□□□□ -0.74
CXCL1-202ENST00000509101 TMEM75Q8N9X5 138 aa10.45□□□□□ -0.74
CXCL1-202ENST00000509101 INO80EQ8NBZ0 244 aaPredicted RBP10.45□□□□□ -0.74
CXCL1-202ENST00000509101 RMI2Q96E14 147 aa10.45□□□□□ -0.74
CXCL1-202ENST00000509101 DNAJC30Q96LL9 226 aa10.45□□□□□ -0.74
CXCL1-202ENST00000509101 SGK494Q96LW2 274 aa10.45□□□□□ -0.74
CXCL1-202ENST00000509101 SH3BGRL3Q9H299 93 aa10.45□□□□□ -0.74
CXCL1-202ENST00000509101 HMGB3O15347 200 aaKnown RBP10.44□□□□□ -0.74
CXCL1-202ENST00000509101 ZNF80P51504 273 aaPredicted RBP10.44□□□□□ -0.74
CXCL1-202ENST00000509101 ACOT6Q3I5F7 207 aaPredicted RBP10.44□□□□□ -0.74
CXCL1-202ENST00000509101 OR10G9Q8NGN4 311 aa10.44□□□□□ -0.74
CXCL1-202ENST00000509101 OR10G7Q8NGN6 311 aa10.44□□□□□ -0.74
CXCL1-202ENST00000509101 ARPC5O15511 151 aa10.43□□□□□ -0.74
CXCL1-202ENST00000509101 RPL37AP61513 92 aaKnown RBP10.43□□□□□ -0.74
CXCL1-202ENST00000509101 OR2G3Q8NGZ4 309 aa10.43□□□□□ -0.74
CXCL1-202ENST00000509101 NDFIP1Q9BT67 221 aa10.43□□□□□ -0.74
CXCL1-202ENST00000509101 PSMG3Q9BT73 122 aaPredicted RBP10.43□□□□□ -0.74
CXCL1-202ENST00000509101 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
CXCL1-202ENST00000509101 OR11H4Q8NGC9 324 aa10.42□□□□□ -0.74
CXCL1-202ENST00000509101 PARLQ9H300 379 aa10.42□□□□□ -0.74
CXCL1-202ENST00000509101 CYTL1Q9NRR1 136 aa10.42□□□□□ -0.74
CXCL1-202ENST00000509101 Q9UF83 564 aa10.42□□□□□ -0.74
CXCL1-202ENST00000509101 URGCP-MRPS24S4R325 110 aa10.42□□□□□ -0.74
CXCL1-202ENST00000509101 A0A1W2PPV4 95 aa10.41□□□□□ -0.74
CXCL1-202ENST00000509101 GCGP01275 180 aa10.41□□□□□ -0.74
CXCL1-202ENST00000509101 RNASE3P12724 160 aaKnown RBP10.41□□□□□ -0.74
CXCL1-202ENST00000509101 ARL6IP6Q8N6S5 226 aa10.41□□□□□ -0.74
CXCL1-202ENST00000509101 CYB561D1Q8N8Q1 229 aa10.41□□□□□ -0.74
CXCL1-202ENST00000509101 PTH2Q96A98 100 aa10.41□□□□□ -0.74
CXCL1-202ENST00000509101 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
CXCL1-202ENST00000509101 A0A087WWC5 75 aa10.4□□□□□ -0.74
CXCL1-202ENST00000509101 TAAR5O14804 337 aa10.4□□□□□ -0.74
CXCL1-202ENST00000509101 CDC34P49427 236 aaPredicted RBP10.4□□□□□ -0.74
CXCL1-202ENST00000509101 PQLC2Q6ZP29 291 aa10.4□□□□□ -0.74
CXCL1-202ENST00000509101 RAB24Q969Q5 203 aa10.4□□□□□ -0.74
CXCL1-202ENST00000509101 UBE2WQ96B02 151 aa10.4□□□□□ -0.74
CXCL1-202ENST00000509101 SAMD10Q9BYL1 202 aa10.4□□□□□ -0.74
CXCL1-202ENST00000509101 IGLV2-11P01706 119 aa10.39□□□□□ -0.75
CXCL1-202ENST00000509101 STAG3L2P0CL84 134 aa10.39□□□□□ -0.75
CXCL1-202ENST00000509101 STAG3L3P0CL85 134 aa10.39□□□□□ -0.75
CXCL1-202ENST00000509101 SERF2P84101 59 aa10.39□□□□□ -0.75
CXCL1-202ENST00000509101 LGALSLQ3ZCW2 172 aaPredicted RBP10.39□□□□□ -0.75
CXCL1-202ENST00000509101 ZFP2Q6ZN57 461 aa10.39□□□□□ -0.75
CXCL1-202ENST00000509101 NIT1Q86X76 327 aa10.39□□□□□ -0.75
CXCL1-202ENST00000509101 C14orf178Q8N769 122 aaPredicted RBP10.39□□□□□ -0.75
CXCL1-202ENST00000509101 DAZAP1Q96EP5 407 aaKnown RBP10.39□□□□□ -0.75
CXCL1-202ENST00000509101 BORCS7-ASMTA0A0B4J1R7 106 aa10.38□□□□□ -0.75
CXCL1-202ENST00000509101 A8MWV9 139 aa10.38□□□□□ -0.75
CXCL1-202ENST00000509101 SEC11BP0C7V7 166 aa10.38□□□□□ -0.75
CXCL1-202ENST00000509101 ARL14EPLP0DKL9 152 aa10.38□□□□□ -0.75
CXCL1-202ENST00000509101 ZNF726P1Q15940 193 aa10.38□□□□□ -0.75
CXCL1-202ENST00000509101 ZFP69Q49AA0 526 aa10.38□□□□□ -0.75
CXCL1-202ENST00000509101 LINC00479Q96M42 142 aa10.38□□□□□ -0.75
CXCL1-202ENST00000509101 JPT2Q9H910 190 aa10.38□□□□□ -0.75
CXCL1-202ENST00000509101 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
CXCL1-202ENST00000509101 FGF8P55075 233 aaPredicted RBP10.37□□□□□ -0.75
CXCL1-202ENST00000509101 SMUG1Q53HV7 270 aa10.37□□□□□ -0.75
CXCL1-202ENST00000509101 KCNRGQ8N5I3 272 aa10.37□□□□□ -0.75
CXCL1-202ENST00000509101 PSG8Q9UQ74 426 aa10.37□□□□□ -0.75
CXCL1-202ENST00000509101 MBP02144 154 aa10.36□□□□□ -0.75
CXCL1-202ENST00000509101 TCRAP04437 139 aa10.36□□□□□ -0.75
CXCL1-202ENST00000509101 S100A4P26447 101 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms