RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TVP23CQ96ET8 276 aa3.16□□□□□ -1.9
NUP54-206ENST00000508465 C16orf74Q96GX8 76 aa3.16□□□□□ -1.9
NUP54-206ENST00000508465 FAM19A4Q96LR4 140 aa3.16□□□□□ -1.9
NUP54-206ENST00000508465 OTORQ9NRC9 128 aa3.16□□□□□ -1.9
NUP54-206ENST00000508465 ZNF492Q9P255 531 aa3.16□□□□□ -1.9
NUP54-206ENST00000508465 TNFSF18Q9UNG2 199 aa3.16□□□□□ -1.9
NUP54-206ENST00000508465 DNAH10Q8IVF4 4471 aa3.16□□□□□ -1.9
NUP54-206ENST00000508465 TRAV26-1A0A087WT03 109 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 TRGV1A0A0A0MS02 117 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 BORCS7-ASMTA0A0B4J1R7 106 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 SNURFLB1AK76 121 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 KLLNB2CW77 178 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 ARPC5O15511 151 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 GNRH2O43555 120 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 IGHV3-53P01767 116 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 ATP5G1P05496 136 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 PRSS1P07477 247 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 P0DMU3 169 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 FAM231AP0DMU4 169 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 FAM231CP0DMU5 169 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 CRISP2P16562 243 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 GCHFRP30047 84 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 ATP5G3P48201 142 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 CDC34P49427 236 aaPredicted RBP3.15□□□□□ -1.91
NUP54-206ENST00000508465 FGF8P55075 233 aaPredicted RBP3.15□□□□□ -1.91
NUP54-206ENST00000508465 TCTAP57738 103 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 TAS2R45P59539 299 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 UBE2G2P60604 165 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 ZNF726P1Q15940 193 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 ZNF493Q6ZR52 646 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 UBE2DNLQ8IWF7 75 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 LYPD1Q8N2G4 141 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 EIF4E3Q8N5X7 224 aaKnown RBP3.15□□□□□ -1.91
NUP54-206ENST00000508465 POM121L12Q8N7R1 296 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 OR11H4Q8NGC9 324 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 CMTM2Q8TAZ6 248 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 TMEM263Q8WUH6 116 aaKnown RBP3.15□□□□□ -1.91
NUP54-206ENST00000508465 LINC00479Q96M42 142 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 ODF3Q96PU9 254 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 TPPP3Q9BW30 176 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 ACTR3CQ9C0K3 210 aaPredicted RBP3.15□□□□□ -1.91
NUP54-206ENST00000508465 Q9H8V8 135 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 CYTL1Q9NRR1 136 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 MRPL16Q9NX20 251 aaKnown RBP3.15□□□□□ -1.91
NUP54-206ENST00000508465 NAGKQ9UJ70 344 aa3.15□□□□□ -1.91
NUP54-206ENST00000508465 TRGV2A0A075B6R0 118 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 IGHV1OR15-1A0A075B7D0 117 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 TEX48A0A1B0GUV7 120 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 F6UZH7 168 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 NMBP08949 121 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 ZNF80P51504 273 aaPredicted RBP3.14□□□□□ -1.91
NUP54-206ENST00000508465 SERF2P84101 59 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 DAZ2Q13117 558 aaKnown RBP3.14□□□□□ -1.91
NUP54-206ENST00000508465 ZNF266Q14584 549 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 TMEM183BQ1AE95 376 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 TMEM183AQ8IXX5 376 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 C11orf72Q8NBR9 251 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 RXFP4Q8TDU9 374 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 ST6GAL2Q96JF0 529 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 FAM210BQ96KR6 192 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 C20orf144Q9BQM9 153 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 TREM1Q9NP99 234 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 EPDR1Q9UM22 224 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 BIRC6Q9NR09 4857 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 DNAH6Q9C0G6 4158 aa3.14□□□□□ -1.91
NUP54-206ENST00000508465 NACAE9PAV3 2078 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 A0A096LPF7 62 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 A0A1B0GV50 99 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 RBAKDNA6NC62 111 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 GGTLC3B5MD39 225 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 F8WDY8 70 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 SPINK4O60575 86 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 CXorf1O96002 111 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 IFNA7P01567 189 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 MBP02144 154 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 STAG3L2P0CL84 134 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 STAG3L3P0CL85 134 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 FHITP49789 147 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 ESRGQ1W209 222 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 FAM74A1Q5RGS3 127 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 AKR1C8PQ5T2L2 129 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 PRNTQ86SH4 94 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 KCNRGQ8N5I3 272 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 LINC00612Q8N6U2 182 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 SUN5Q8TC36 379 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 ASB13Q8WXK3 278 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 GNPNAT1Q96EK6 184 aaPredicted RBP3.13□□□□□ -1.91
NUP54-206ENST00000508465 PSMG3Q9BT73 122 aaPredicted RBP3.13□□□□□ -1.91
NUP54-206ENST00000508465 PSG8Q9UQ74 426 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 LINC00588Q9Y4M8 146 aa3.13□□□□□ -1.91
NUP54-206ENST00000508465 DNAH2Q9P225 4427 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 IGHV3-16A0A0C4DH30 117 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 TAAR5O14804 337 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 RTL8CO15255 209 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 GCGP01275 180 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 TCRAP04437 139 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 SFTA3P0C7M3 94 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 TCL1AP56279 114 aa3.12□□□□□ -1.91
NUP54-206ENST00000508465 SSTP61278 116 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms