RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 GRIFINA4D1Z8 144 aa10.5□□□□□ -0.73
RNF4-210ENST00000508235 H3BVH4 76 aa10.5□□□□□ -0.73
RNF4-210ENST00000508235 IGLV2-8P01709 118 aa10.5□□□□□ -0.73
RNF4-210ENST00000508235 ARMS2P0C7Q2 107 aa10.5□□□□□ -0.73
RNF4-210ENST00000508235 MED14OSP0DP75 135 aa10.5□□□□□ -0.73
RNF4-210ENST00000508235 CSMD3Q7Z407 3707 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 STARD9Q9P2P6 4700 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 PGPEP1LA6NFU8 196 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 A8MWV9 139 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 PAX4O43316 350 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 RPS20P60866 119 aaKnown RBP10.49□□□□□ -0.73
RNF4-210ENST00000508235 RAB14P61106 215 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 FHL2Q14192 279 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 RNF212Q495C1 297 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 UBE2DNLQ8IWF7 75 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 ZNF479Q96JC4 524 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
RNF4-210ENST00000508235 XKRY2A2RUG3 117 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 C19orf71A6NCJ1 209 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 RS1O15537 224 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 P01737 135 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 SFTA3P0C7M3 94 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 CEBPGP53567 150 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 CRYBA4P53673 196 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 FAM3BP58499 235 aaPredicted RBP10.48□□□□□ -0.73
RNF4-210ENST00000508235 PEA15Q15121 130 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 POM121L12Q8N7R1 296 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 SMDT1Q9H4I9 107 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 SCRT2Q9NQ03 307 aa10.48□□□□□ -0.73
RNF4-210ENST00000508235 CCL18P55774 89 aa10.47□□□□□ -0.73
RNF4-210ENST00000508235 RPL19P84098 196 aaKnown RBP10.47□□□□□ -0.73
RNF4-210ENST00000508235 CFAP126Q5VTH2 177 aa10.47□□□□□ -0.73
RNF4-210ENST00000508235 ZFP82Q8N141 532 aa10.47□□□□□ -0.73
RNF4-210ENST00000508235 PCNPQ8WW12 178 aaKnown RBP10.47□□□□□ -0.73
RNF4-210ENST00000508235 VSIG2Q96IQ7 327 aa10.47□□□□□ -0.73
RNF4-210ENST00000508235 ICOSQ9Y6W8 199 aa10.47□□□□□ -0.73
RNF4-210ENST00000508235 LY96Q9Y6Y9 160 aa10.47□□□□□ -0.73
RNF4-210ENST00000508235 SRP19P09132 144 aaKnown RBP10.46□□□□□ -0.73
RNF4-210ENST00000508235 OR5AL1P0C617 328 aa10.46□□□□□ -0.73
RNF4-210ENST00000508235 ZNF575Q86XF7 245 aa10.46□□□□□ -0.73
RNF4-210ENST00000508235 OR2D3Q8NGH3 330 aa10.46□□□□□ -0.73
RNF4-210ENST00000508235 OCC1Q8TAD7 63 aa10.46□□□□□ -0.73
RNF4-210ENST00000508235 SMIM7Q9BQ49 75 aa10.46□□□□□ -0.73
RNF4-210ENST00000508235 NACAE9PAV3 2078 aa10.46□□□□□ -0.74
RNF4-210ENST00000508235 ZNF727A8MUV8 499 aa10.45□□□□□ -0.74
RNF4-210ENST00000508235 M0R381 172 aa10.45□□□□□ -0.74
RNF4-210ENST00000508235 RHODO00212 210 aa10.45□□□□□ -0.74
RNF4-210ENST00000508235 MRPL23Q16540 153 aaKnown RBP10.45□□□□□ -0.74
RNF4-210ENST00000508235 FAM74A3Q4VXF1 159 aa10.45□□□□□ -0.74
RNF4-210ENST00000508235 DMRTA1Q5VZB9 504 aa10.45□□□□□ -0.74
RNF4-210ENST00000508235 ZFP2Q6ZN57 461 aa10.45□□□□□ -0.74
RNF4-210ENST00000508235 SSBP4Q9BWG4 385 aaPredicted RBP10.45□□□□□ -0.74
RNF4-210ENST00000508235 TRBV6-4A0A1B0GX49 114 aa10.44□□□□□ -0.74
RNF4-210ENST00000508235 SNAI2O43623 268 aa10.44□□□□□ -0.74
RNF4-210ENST00000508235 GATA1P15976 413 aaPredicted RBP10.44□□□□□ -0.74
RNF4-210ENST00000508235 PRADC1Q9BSG0 188 aa10.44□□□□□ -0.74
RNF4-210ENST00000508235 A0A096LPF7 62 aa10.43□□□□□ -0.74
RNF4-210ENST00000508235 K7EN84 100 aa10.43□□□□□ -0.74
RNF4-210ENST00000508235 RHOHQ15669 191 aa10.43□□□□□ -0.74
RNF4-210ENST00000508235 SPANXN1Q5VSR9 72 aa10.43□□□□□ -0.74
RNF4-210ENST00000508235 SH2D6Q7Z4S9 175 aa10.43□□□□□ -0.74
RNF4-210ENST00000508235 FER1L6-AS1Q8NA97 138 aa10.43□□□□□ -0.74
RNF4-210ENST00000508235 NUDT10Q8NFP7 164 aa10.43□□□□□ -0.74
RNF4-210ENST00000508235 NUDT11Q96G61 164 aa10.43□□□□□ -0.74
RNF4-210ENST00000508235 F2Z2F3 143 aa10.42□□□□□ -0.74
RNF4-210ENST00000508235 NXPH4O95158 308 aa10.42□□□□□ -0.74
RNF4-210ENST00000508235 GYPEP15421 78 aa10.42□□□□□ -0.74
RNF4-210ENST00000508235 SRIP30626 198 aa10.42□□□□□ -0.74
RNF4-210ENST00000508235 FAM231DQ6ZW35 169 aa10.42□□□□□ -0.74
RNF4-210ENST00000508235 NEGR1Q7Z3B1 354 aa10.42□□□□□ -0.74
RNF4-210ENST00000508235 SFRP2Q96HF1 295 aa10.42□□□□□ -0.74
RNF4-210ENST00000508235 RPP21Q9H633 154 aaKnown RBP10.42□□□□□ -0.74
RNF4-210ENST00000508235 IGHV3-73A0A0B4J1V6 119 aa10.41□□□□□ -0.74
RNF4-210ENST00000508235 A0A1W2PPQ1 181 aa10.41□□□□□ -0.74
RNF4-210ENST00000508235 K7EQD1 137 aa10.41□□□□□ -0.74
RNF4-210ENST00000508235 CACNG7P62955 275 aa10.41□□□□□ -0.74
RNF4-210ENST00000508235 TMEM241Q24JQ0 296 aa10.41□□□□□ -0.74
RNF4-210ENST00000508235 LINC01551Q86U37 167 aa10.41□□□□□ -0.74
RNF4-210ENST00000508235 SLC25A29Q8N8R3 303 aa10.41□□□□□ -0.74
RNF4-210ENST00000508235 OR10AG1Q8NH19 301 aa10.41□□□□□ -0.74
RNF4-210ENST00000508235 TPPP3Q9BW30 176 aa10.41□□□□□ -0.74
RNF4-210ENST00000508235 RNASE7Q9H1E1 156 aaKnown RBP10.41□□□□□ -0.74
RNF4-210ENST00000508235 LINC00588Q9Y4M8 146 aa10.41□□□□□ -0.74
RNF4-210ENST00000508235 IGLC6P0CF74 106 aa10.4□□□□□ -0.74
RNF4-210ENST00000508235 ERVFC1-1P60608 527 aa10.4□□□□□ -0.74
RNF4-210ENST00000508235 CLLU1Q5K131 121 aa10.4□□□□□ -0.74
RNF4-210ENST00000508235 FAM74A4Q5TZK3 123 aa10.4□□□□□ -0.74
RNF4-210ENST00000508235 GATCO43716 136 aaKnown RBP10.39□□□□□ -0.75
RNF4-210ENST00000508235 GZMBP10144 247 aa10.39□□□□□ -0.75
RNF4-210ENST00000508235 SRSF3P84103 164 aaKnown RBP10.39□□□□□ -0.75
RNF4-210ENST00000508235 ESRGQ1W209 222 aa10.39□□□□□ -0.75
RNF4-210ENST00000508235 SOHLH1Q5JUK2 328 aa10.39□□□□□ -0.75
RNF4-210ENST00000508235 UFSP1Q6NVU6 142 aa10.39□□□□□ -0.75
RNF4-210ENST00000508235 SAMD10Q9BYL1 202 aa10.39□□□□□ -0.75
RNF4-210ENST00000508235 JPT2Q9H910 190 aa10.39□□□□□ -0.75
RNF4-210ENST00000508235 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
RNF4-210ENST00000508235 KMT2CQ8NEZ4 4911 aaKnown RBP10.39□□□□□ -0.75
RNF4-210ENST00000508235 A0A087WWL8 130 aa10.38□□□□□ -0.75
RNF4-210ENST00000508235 A8MWL6 223 aa10.38□□□□□ -0.75
RNF4-210ENST00000508235 C9JQL5 133 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms