RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 FLI1Q01543 452 aaPredicted RBP7.72□□□□□ -1.17
HMGCS1-204ENST00000507293 SMUG1Q53HV7 270 aa7.72□□□□□ -1.17
HMGCS1-204ENST00000507293 LELP1Q5T871 98 aa7.72□□□□□ -1.17
HMGCS1-204ENST00000507293 CYB561D1Q8N8Q1 229 aa7.72□□□□□ -1.17
HMGCS1-204ENST00000507293 NTN5Q8WTR8 489 aaPredicted RBP7.72□□□□□ -1.17
HMGCS1-204ENST00000507293 SH3BGRL3Q9H299 93 aa7.72□□□□□ -1.17
HMGCS1-204ENST00000507293 CXorf1O96002 111 aa7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 MGST1P10620 155 aaKnown RBP7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 RNASE3P12724 160 aaKnown RBP7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 Q8N814 137 aa7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 INO80EQ8NBZ0 244 aaPredicted RBP7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 OR2T35Q8NGX2 323 aa7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 ATP6V0E2Q8NHE4 81 aa7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 PTH2Q96A98 100 aa7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 AQP10Q96PS8 301 aa7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 TMEM70Q9BUB7 260 aa7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 TMEM167BQ9NRX6 74 aa7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 EPDR1Q9UM22 224 aa7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 BOLA1Q9Y3E2 137 aa7.71□□□□□ -1.18
HMGCS1-204ENST00000507293 MBP02144 154 aa7.7□□□□□ -1.18
HMGCS1-204ENST00000507293 SERF2P84101 59 aa7.7□□□□□ -1.18
HMGCS1-204ENST00000507293 Q6ZSN1 163 aa7.7□□□□□ -1.18
HMGCS1-204ENST00000507293 ACTR3CQ9C0K3 210 aaPredicted RBP7.7□□□□□ -1.18
HMGCS1-204ENST00000507293 GTSF1LQ9H1H1 148 aa7.7□□□□□ -1.18
HMGCS1-204ENST00000507293 PARLQ9H300 379 aa7.7□□□□□ -1.18
HMGCS1-204ENST00000507293 FXYD6-FXYD2A0A087WZ82 144 aa7.69□□□□□ -1.18
HMGCS1-204ENST00000507293 TRAV34A0A0B4J273 112 aa7.69□□□□□ -1.18
HMGCS1-204ENST00000507293 SAPCD1Q5SSQ6 148 aa7.69□□□□□ -1.18
HMGCS1-204ENST00000507293 Q8N3U1 123 aa7.69□□□□□ -1.18
HMGCS1-204ENST00000507293 TNFSF18Q9UNG2 199 aa7.69□□□□□ -1.18
HMGCS1-204ENST00000507293 IGKV3D-20A0A0C4DH25 116 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 GAGE12JA6NER3 117 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 A8MWV9 139 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 FAM229AH3BQW9 127 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 LINC00694P0DN24 101 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 S100A4P26447 101 aaKnown RBP7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 ASIPP42127 132 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 GAGE1Q13065 139 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 GAGE4Q13068 117 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 GAGE5Q13069 117 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 WFDC2Q14508 124 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 LAGE3Q14657 143 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 LGALSLQ3ZCW2 172 aaPredicted RBP7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 GAGE13Q4V321 117 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 Q5BKY6 102 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 LINC00479Q96M42 142 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 ARL2-SNX15V9GYD0 113 aa7.68□□□□□ -1.18
HMGCS1-204ENST00000507293 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 A0A1W2PRE2 83 aa7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 UBE2G2P60604 165 aa7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 ZNF726P1Q15940 193 aa7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 RPL7L1Q6DKI1 246 aaKnown RBP7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 ZFP2Q6ZN57 461 aa7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 Q6ZNX1 250 aa7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 Q86TA4 180 aa7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 TM2D2Q9BX73 214 aa7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 JPT2Q9H910 190 aa7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 FAM30AQ9NZY2 134 aa7.67□□□□□ -1.18
HMGCS1-204ENST00000507293 BORCS7-ASMTA0A0B4J1R7 106 aa7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 RNF222A6NCQ9 220 aa7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 FABP5P3A8MUU1 101 aa7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 H3BVH4 76 aa7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 PEX7O00628 323 aa7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 IFNA7P01567 189 aa7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 PIK3CD-AS1Q5SR53 167 aa7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 C14orf178Q8N769 122 aaPredicted RBP7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 SAMD10Q9BYL1 202 aa7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 IL36BQ9NZH7 164 aa7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 Q9UF83 564 aa7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 FLG2Q5D862 2391 aaPredicted RBP7.66□□□□□ -1.18
HMGCS1-204ENST00000507293 HERC1Q15751 4861 aa7.65□□□□□ -1.18
HMGCS1-204ENST00000507293 CTXND1A0A1B0GTU2 59 aa7.65□□□□□ -1.18
HMGCS1-204ENST00000507293 B4DEV8 164 aa7.65□□□□□ -1.18
HMGCS1-204ENST00000507293 M0R036 132 aa7.65□□□□□ -1.18
HMGCS1-204ENST00000507293 LECT2O14960 151 aa7.65□□□□□ -1.18
HMGCS1-204ENST00000507293 FGF8P55075 233 aaPredicted RBP7.65□□□□□ -1.18
HMGCS1-204ENST00000507293 UFSP1Q6NVU6 142 aa7.65□□□□□ -1.18
HMGCS1-204ENST00000507293 DAZ4Q86SG3 579 aaKnown RBP7.65□□□□□ -1.18
HMGCS1-204ENST00000507293 DAZ3Q9NR90 486 aaKnown RBP7.65□□□□□ -1.18
HMGCS1-204ENST00000507293 TRAV8-3A0A0A6YYJ7 113 aa7.64□□□□□ -1.19
HMGCS1-204ENST00000507293 FAM74A7A6NL05 159 aa7.64□□□□□ -1.19
HMGCS1-204ENST00000507293 ARPC5O15511 151 aa7.64□□□□□ -1.19
HMGCS1-204ENST00000507293 C1QBP02746 253 aa7.64□□□□□ -1.19
HMGCS1-204ENST00000507293 TOR2AQ5JU69 321 aa7.64□□□□□ -1.19
HMGCS1-204ENST00000507293 DMRTA1Q5VZB9 504 aa7.64□□□□□ -1.19
HMGCS1-204ENST00000507293 SYT8Q8NBV8 401 aa7.64□□□□□ -1.19
HMGCS1-204ENST00000507293 ZC2HC1AQ96GY0 325 aa7.64□□□□□ -1.19
HMGCS1-204ENST00000507293 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 A0A087WWC5 75 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 GRIFINA4D1Z8 144 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 HMSDA8MTL9 139 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 KRBOX1C9JBD0 128 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 G3V3Q6 166 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 RHODO00212 210 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 SH2D1AO60880 128 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 ARMS2P0C7Q2 107 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 CRIP1P50238 77 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 DNLZQ5SXM8 178 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 AKR1C8PQ5T2L2 129 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 FAM74A4Q5TZK3 123 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms