RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 TRAV2A0A0B4J234 112 aa1.82□□□□□ -2.12
HERC3-209ENST00000504994 CXorf51AA0A1B0GTR3 108 aa1.82□□□□□ -2.12
HERC3-209ENST00000504994 FXYD4P59646 89 aa1.82□□□□□ -2.12
HERC3-209ENST00000504994 SBSPONQ8IVN8 264 aa1.82□□□□□ -2.12
HERC3-209ENST00000504994 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.82□□□□□ -2.12
HERC3-209ENST00000504994 PDCD10Q9BUL8 212 aa1.82□□□□□ -2.12
HERC3-209ENST00000504994 C22orf24Q9Y442 160 aa1.82□□□□□ -2.12
HERC3-209ENST00000504994 E9PCH4 1651 aa1.82□□□□□ -2.12
HERC3-209ENST00000504994 ATG2AQ2TAZ0 1938 aa1.81□□□□□ -2.12
HERC3-209ENST00000504994 ZGRF1Q86YA3 2104 aa1.81□□□□□ -2.12
HERC3-209ENST00000504994 SPAARA0A1B0GVQ0 90 aa1.81□□□□□ -2.12
HERC3-209ENST00000504994 APOC1P02654 83 aa1.81□□□□□ -2.12
HERC3-209ENST00000504994 APODP05090 189 aa1.81□□□□□ -2.12
HERC3-209ENST00000504994 LYNX1P0DP58 116 aa1.81□□□□□ -2.12
HERC3-209ENST00000504994 PPDPFLQ8WWR9 84 aa1.81□□□□□ -2.12
HERC3-209ENST00000504994 MRPL57Q9BQC6 102 aaKnown RBP1.81□□□□□ -2.12
HERC3-209ENST00000504994 SEC11CQ9BY50 192 aa1.81□□□□□ -2.12
HERC3-209ENST00000504994 BOKQ9UMX3 212 aaPredicted RBP1.81□□□□□ -2.12
HERC3-209ENST00000504994 WDR7Q9Y4E6 1490 aa1.81□□□□□ -2.12
HERC3-209ENST00000504994 CCDC179H3BU77 68 aa1.8□□□□□ -2.12
HERC3-209ENST00000504994 PIRTP0C851 137 aa1.8□□□□□ -2.12
HERC3-209ENST00000504994 CGREF1Q99674 301 aa1.8□□□□□ -2.12
HERC3-209ENST00000504994 AGPAT4-IT1Q9H0P7 198 aa1.8□□□□□ -2.12
HERC3-209ENST00000504994 ATG5Q9H1Y0 275 aa1.8□□□□□ -2.12
HERC3-209ENST00000504994 NDUFA12Q9UI09 145 aa1.8□□□□□ -2.12
HERC3-209ENST00000504994 DLG5Q8TDM6 1919 aa1.79□□□□□ -2.12
HERC3-209ENST00000504994 RPL37AP61513 92 aaKnown RBP1.79□□□□□ -2.12
HERC3-209ENST00000504994 OR2T2Q6IF00 324 aa1.79□□□□□ -2.12
HERC3-209ENST00000504994 DMAC1Q96GE9 116 aa1.79□□□□□ -2.12
HERC3-209ENST00000504994 SNRNP25Q9BV90 132 aaKnown RBP1.79□□□□□ -2.12
HERC3-209ENST00000504994 TMEM242Q9NWH2 141 aa1.79□□□□□ -2.12
HERC3-209ENST00000504994 SCN3BQ9NY72 215 aa1.79□□□□□ -2.12
HERC3-209ENST00000504994 FBN1P35555 2871 aaKnown RBP1.79□□□□□ -2.12
HERC3-209ENST00000504994 IL5P05113 134 aa1.78□□□□□ -2.12
HERC3-209ENST00000504994 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
HERC3-209ENST00000504994 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
HERC3-209ENST00000504994 Q6ZSA8 131 aa1.78□□□□□ -2.12
HERC3-209ENST00000504994 CACNA1BQ00975 2339 aa1.78□□□□□ -2.13
HERC3-209ENST00000504994 MUC22E2RYF6 1773 aaPredicted RBP1.77□□□□□ -2.13
HERC3-209ENST00000504994 PTPRMP28827 1452 aa1.77□□□□□ -2.13
HERC3-209ENST00000504994 TRBV10-1A0A0K0K1A3 114 aa1.77□□□□□ -2.13
HERC3-209ENST00000504994 SNRNP200O75643 2136 aaKnown RBP1.77□□□□□ -2.13
HERC3-209ENST00000504994 IFNGP01579 166 aa1.77□□□□□ -2.13
HERC3-209ENST00000504994 CCKP06307 115 aa1.77□□□□□ -2.13
HERC3-209ENST00000504994 FGF7P21781 194 aa1.77□□□□□ -2.13
HERC3-209ENST00000504994 TMEM203Q969S6 136 aa1.77□□□□□ -2.13
HERC3-209ENST00000504994 BCL9LQ86UU0 1499 aa1.76□□□□□ -2.13
HERC3-209ENST00000504994 SMG6Q86US8 1419 aaKnown RBP1.76□□□□□ -2.13
HERC3-209ENST00000504994 LOC101927531A0A1B0GV80 90 aa1.76□□□□□ -2.13
HERC3-209ENST00000504994 HIGD1CA8MV81 97 aa1.76□□□□□ -2.13
HERC3-209ENST00000504994 AKAIN1P0CW23 69 aa1.76□□□□□ -2.13
HERC3-209ENST00000504994 BTG2P78543 158 aa1.76□□□□□ -2.13
HERC3-209ENST00000504994 SPANXN1Q5VSR9 72 aa1.76□□□□□ -2.13
HERC3-209ENST00000504994 PP6455Q8WZ26 134 aa1.76□□□□□ -2.13
HERC3-209ENST00000504994 LSM10Q969L4 123 aaKnown RBP1.76□□□□□ -2.13
HERC3-209ENST00000504994 RERGLQ9H628 205 aa1.76□□□□□ -2.13
HERC3-209ENST00000504994 MRPL35Q9NZE8 188 aaKnown RBP1.76□□□□□ -2.13
HERC3-209ENST00000504994 GNG8Q9UK08 70 aa1.76□□□□□ -2.13
HERC3-209ENST00000504994 CITO14578 2027 aa1.76□□□□□ -2.13
HERC3-209ENST00000504994 RP1L1Q8IWN7 2480 aaPredicted RBP1.76□□□□□ -2.13
HERC3-209ENST00000504994 TECTAO75443 2155 aa1.75□□□□□ -2.13
HERC3-209ENST00000504994 PEAK1Q9H792 1746 aa1.75□□□□□ -2.13
HERC3-209ENST00000504994 F6UZH7 168 aa1.75□□□□□ -2.13
HERC3-209ENST00000504994 SPTSSAQ969W0 71 aa1.75□□□□□ -2.13
HERC3-209ENST00000504994 IFI27L1Q96BM0 104 aa1.75□□□□□ -2.13
HERC3-209ENST00000504994 NBDYA0A0U1RRE5 68 aa1.74□□□□□ -2.13
HERC3-209ENST00000504994 SNCGO76070 127 aa1.74□□□□□ -2.13
HERC3-209ENST00000504994 NDUFB6O95139 128 aa1.74□□□□□ -2.13
HERC3-209ENST00000504994 S100A1P23297 94 aa1.74□□□□□ -2.13
HERC3-209ENST00000504994 DEFB132Q7Z7B7 95 aa1.74□□□□□ -2.13
HERC3-209ENST00000504994 TMEM141Q96I45 108 aa1.74□□□□□ -2.13
HERC3-209ENST00000504994 NAIPQ13075 1403 aa1.74□□□□□ -2.13
HERC3-209ENST00000504994 DLEC1Q9Y238 1755 aa1.73□□□□□ -2.13
HERC3-209ENST00000504994 CORTO00230 105 aa1.73□□□□□ -2.13
HERC3-209ENST00000504994 NCR3O14931 201 aa1.73□□□□□ -2.13
HERC3-209ENST00000504994 PIPP12273 146 aaPredicted RBP1.73□□□□□ -2.13
HERC3-209ENST00000504994 EFNA4P52798 201 aa1.73□□□□□ -2.13
HERC3-209ENST00000504994 UBE2G1P62253 170 aa1.73□□□□□ -2.13
HERC3-209ENST00000504994 TSKUQ8WUA8 353 aa1.73□□□□□ -2.13
HERC3-209ENST00000504994 COPS9Q8WXC6 57 aa1.73□□□□□ -2.13
HERC3-209ENST00000504994 AMELYQ99218 206 aa1.73□□□□□ -2.13
HERC3-209ENST00000504994 SERP1Q9Y6X1 66 aa1.73□□□□□ -2.13
HERC3-209ENST00000504994 CFTRP13569 1480 aa1.73□□□□□ -2.13
HERC3-209ENST00000504994 AFDNP55196 1824 aaKnown RBP1.73□□□□□ -2.13
HERC3-209ENST00000504994 MIF4GDA9UHW6 222 aaKnown RBP1.72□□□□□ -2.13
HERC3-209ENST00000504994 S100PP25815 95 aa1.72□□□□□ -2.13
HERC3-209ENST00000504994 FXYD3Q14802 87 aa1.72□□□□□ -2.13
HERC3-209ENST00000504994 WHAMMP3Q1A5X7 153 aa1.72□□□□□ -2.13
HERC3-209ENST00000504994 C9orf116Q5BN46 136 aaPredicted RBP1.72□□□□□ -2.13
HERC3-209ENST00000504994 S100A7L2Q5SY68 101 aa1.72□□□□□ -2.13
HERC3-209ENST00000504994 SLC48A1Q6P1K1 146 aa1.72□□□□□ -2.13
HERC3-209ENST00000504994 NAA60Q9H7X0 242 aa1.72□□□□□ -2.13
HERC3-209ENST00000504994 MCRIP1C9JLW8 97 aa1.71□□□□□ -2.14
HERC3-209ENST00000504994 Q6ZS92 163 aa1.71□□□□□ -2.14
HERC3-209ENST00000504994 LINC00208Q96KT6 92 aa1.71□□□□□ -2.14
HERC3-209ENST00000504994 LAMB1P07942 1786 aa1.71□□□□□ -2.14
HERC3-209ENST00000504994 BCORL1Q5H9F3 1711 aa1.71□□□□□ -2.14
HERC3-209ENST00000504994 RIMS1Q86UR5 1692 aaKnown RBP1.71□□□□□ -2.14
HERC3-209ENST00000504994 SPTBP11277 2137 aa1.7□□□□□ -2.14
HERC3-209ENST00000504994 CDK12Q9NYV4 1490 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms