RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
SNX25-203ENST00000504959 CLPSL1A2RUU4 121 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 RBAKDNA6NC62 111 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 A6NDX4 124 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 FABP5P3A8MUU1 101 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 H3BUA1 57 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 CDK2AP2O75956 126 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 LEPROTL1O95214 131 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 IGHG2P01859 326 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 IGF1P05019 195 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 TWIST1Q15672 202 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 TMEM191AQ9H0A3 160 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 A0A0G2JLM5 398 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 K7EP13 123 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 NDUFA4O00483 81 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 UTP20O75691 2785 aaKnown RBP4.28□□□□□ -1.72
SNX25-203ENST00000504959 NDUFA7O95182 113 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 TSHBP01222 138 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 IGHV3-11P01762 117 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 IGHG4P01861 327 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 BLCAPP62952 87 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 GAGE5Q13069 117 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 GAGE6Q13070 117 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 PRIMA1Q86XR5 153 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 FER1L6-AS1Q8NA97 138 aa4.28□□□□□ -1.72
SNX25-203ENST00000504959 RPL36ALQ969Q0 106 aaKnown RBP4.28□□□□□ -1.72
SNX25-203ENST00000504959 TIMM8BQ9Y5J9 83 aaPredicted RBP4.28□□□□□ -1.72
SNX25-203ENST00000504959 CELSR1Q9NYQ6 3014 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 A0A087WZ39 114 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 MUC21A0A0G2JKD1 596 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 MUC21A0A140T8X8 626 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 TMEM213A2RRL7 107 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 HSBP1L1C9JCN9 74 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 PRAC2D3DTV9 90 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 ZNF80P51504 273 aaPredicted RBP4.27□□□□□ -1.73
SNX25-203ENST00000504959 ZNF138P52744 262 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 MPV17L2Q567V2 206 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 MUC21Q5SSG8 566 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 SLC25A34Q6PIV7 304 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 ZNF493Q6ZR52 646 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 FA2HQ7L5A8 372 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 GATD1Q8NB37 220 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 OR4X2Q8NGF9 303 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 MAP1LC3CQ9BXW4 147 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 MS4A6AQ9H2W1 248 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 SCRT2Q9NQ03 307 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 TP73-AS1Q9UF72 201 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 HSPB8Q9UJY1 196 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 SPTAN1Q13813 2472 aaKnown RBP4.27□□□□□ -1.73
SNX25-203ENST00000504959 FLNCQ14315 2725 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 CRYBG3Q68DQ2 2970 aa4.27□□□□□ -1.73
SNX25-203ENST00000504959 TRBV12-3P01733 135 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 RBX1P62877 108 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 HIST1H1AQ02539 215 aaPredicted RBP4.26□□□□□ -1.73
SNX25-203ENST00000504959 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 BVES-AS1Q5T3Y7 98 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 LINC01545Q5VT33 79 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 C12orf54Q6X4T0 127 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 C9orf139Q6ZV77 190 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 ORMDL3Q8N138 153 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 AGPAT4-IT1Q9H0P7 198 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 ANKRD17O75179 2603 aaKnown RBP4.26□□□□□ -1.73
SNX25-203ENST00000504959 COL12A1Q99715 3063 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 MYO18BQ8IUG5 2567 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 TRAV8-2A0A0B4J237 113 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 LOC389332A0A1B0GUA5 103 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 D6R8Y8 96 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 H0Y8G0 127 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 J3QLI3 93 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 TAX1BP3O14907 124 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 BRI3O95415 125 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 CKS2P33552 79 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 SRSF9Q13242 221 aaKnown RBP eCLIP4.26□□□□□ -1.73
SNX25-203ENST00000504959 VAMP3Q15836 100 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 DEFB112Q30KQ8 113 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 LINC01620Q4KN68 170 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 FAM104BQ5XKR9 115 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 UNQ9165/PRO28630Q6UXU0 137 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 SMIM15Q7Z3B0 74 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 AMN1Q8IY45 258 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 DEFB125Q8N687 156 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 MAPK1IP1LQ8NDC0 245 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 OR4C5Q8NGB2 326 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 OR10J6PQ8NGY7 276 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 PRELID3AQ96N28 172 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 MCRIP2Q9BUT9 160 aaKnown RBP4.26□□□□□ -1.73
SNX25-203ENST00000504959 MAP1AP78559 2803 aaPredicted RBP4.26□□□□□ -1.73
SNX25-203ENST00000504959 DOPEY1Q5JWR5 2465 aa4.26□□□□□ -1.73
SNX25-203ENST00000504959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.25□□□□□ -1.738e-9■■■■■ 28.9
SNX25-203ENST00000504959 UBR5O95071 2799 aaPredicted RBP4.25□□□□□ -1.73
SNX25-203ENST00000504959 IGKV3-7A0A075B6H7 116 aa4.25□□□□□ -1.73
SNX25-203ENST00000504959 IGHV4-59P01825 116 aa4.25□□□□□ -1.73
SNX25-203ENST00000504959 IGLC6P0CF74 106 aa4.25□□□□□ -1.73
SNX25-203ENST00000504959 IFI27P40305 119 aaPredicted RBP4.25□□□□□ -1.73
SNX25-203ENST00000504959 CDKN1BP46527 198 aa4.25□□□□□ -1.73
SNX25-203ENST00000504959 FAM106AQ4KMX7 169 aa4.25□□□□□ -1.73
SNX25-203ENST00000504959 MRPL51Q4U2R6 128 aaKnown RBP4.25□□□□□ -1.73
SNX25-203ENST00000504959 C9orf47Q6ZRZ4 202 aa4.25□□□□□ -1.73
SNX25-203ENST00000504959 OR10AG1Q8NH19 301 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms