RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 CCL4P13236 92 aa2.58□□□□□ -2
SUB1-202ENST00000502453 DYNLT1P63172 113 aa2.58□□□□□ -2
SUB1-202ENST00000502453 MPV17LQ2QL34 196 aa2.58□□□□□ -2
SUB1-202ENST00000502453 Q8N8P6 123 aa2.58□□□□□ -2
SUB1-202ENST00000502453 CNEP1R1Q8N9A8 125 aa2.58□□□□□ -2
SUB1-202ENST00000502453 SMDT1Q9H4I9 107 aa2.58□□□□□ -2
SUB1-202ENST00000502453 TP53TG3Q9ULZ0 132 aa2.58□□□□□ -2
SUB1-202ENST00000502453 TSC2P49815 1807 aa2.58□□□□□ -2
SUB1-202ENST00000502453 A0A1B0GUV1 79 aa2.58□□□□□ -2
SUB1-202ENST00000502453 FAM24AA6NFZ4 105 aa2.58□□□□□ -2
SUB1-202ENST00000502453 SDCBPO00560 298 aaPredicted RBP2.58□□□□□ -2
SUB1-202ENST00000502453 LY6HO94772 140 aa2.58□□□□□ -2
SUB1-202ENST00000502453 CCL3P10147 92 aa2.58□□□□□ -2
SUB1-202ENST00000502453 MRPS36P82909 103 aaKnown RBP2.58□□□□□ -2
SUB1-202ENST00000502453 PYDC2Q56P42 97 aa2.58□□□□□ -2
SUB1-202ENST00000502453 PATE2Q6UY27 113 aa2.58□□□□□ -2
SUB1-202ENST00000502453 ZFP2Q6ZN57 461 aa2.58□□□□□ -2
SUB1-202ENST00000502453 C2orf91Q6ZV80 131 aa2.58□□□□□ -2
SUB1-202ENST00000502453 ZFAND2AQ8N6M9 145 aa2.58□□□□□ -2
SUB1-202ENST00000502453 COPS9Q8WXC6 57 aa2.58□□□□□ -2
SUB1-202ENST00000502453 SNRNP200O75643 2136 aaKnown RBP2.58□□□□□ -2
SUB1-202ENST00000502453 C19orf71A6NCJ1 209 aa2.58□□□□□ -2
SUB1-202ENST00000502453 UMAD1C9J7I0 102 aa2.58□□□□□ -2
SUB1-202ENST00000502453 SUPT4H1P63272 117 aaKnown RBP2.58□□□□□ -2
SUB1-202ENST00000502453 SIGLECL1Q8N7X8 197 aa2.58□□□□□ -2
SUB1-202ENST00000502453 LINC01560Q8TB33 94 aa2.58□□□□□ -2
SUB1-202ENST00000502453 FAM213BQ8TBF2 198 aa2.58□□□□□ -2
SUB1-202ENST00000502453 OR8B2Q96RD0 313 aa2.58□□□□□ -2
SUB1-202ENST00000502453 SCN9AQ15858 1988 aa2.58□□□□□ -2
SUB1-202ENST00000502453 MED12LQ86YW9 2145 aa2.58□□□□□ -2
SUB1-202ENST00000502453 IGLV3-9A0A075B6K5 115 aa2.57□□□□□ -2
SUB1-202ENST00000502453 H3BMM0 161 aa2.57□□□□□ -2
SUB1-202ENST00000502453 INSL4Q14641 139 aa2.57□□□□□ -2
SUB1-202ENST00000502453 COMMD6Q7Z4G1 85 aa2.57□□□□□ -2
SUB1-202ENST00000502453 C15orf53Q8NAA6 179 aa2.57□□□□□ -2
SUB1-202ENST00000502453 UBE2WQ96B02 151 aa2.57□□□□□ -2
SUB1-202ENST00000502453 C11orf1Q9H5F2 150 aa2.57□□□□□ -2
SUB1-202ENST00000502453 LTBP2Q14767 1821 aa2.57□□□□□ -2
SUB1-202ENST00000502453 DSCAMO60469 2012 aa2.57□□□□□ -2
SUB1-202ENST00000502453 LOC107984156A0A0G2JMH3 177 aa2.57□□□□□ -2
SUB1-202ENST00000502453 KRTAP9-6A0A140TA67 174 aa2.57□□□□□ -2
SUB1-202ENST00000502453 KRTAP9-7A8MTY7 169 aa2.57□□□□□ -2
SUB1-202ENST00000502453 ARL17AQ8IVW1 177 aa2.57□□□□□ -2
SUB1-202ENST00000502453 TYMSOSQ8TAI1 123 aa2.57□□□□□ -2
SUB1-202ENST00000502453 CYTL1Q9NRR1 136 aa2.57□□□□□ -2
SUB1-202ENST00000502453 COL4A6Q14031 1691 aa2.57□□□□□ -2
SUB1-202ENST00000502453 CFAP54Q96N23 3096 aa2.57□□□□□ -2
SUB1-202ENST00000502453 ABCA7Q8IZY2 2146 aa2.57□□□□□ -2
SUB1-202ENST00000502453 IBA57-AS1B1ANH7 110 aa2.57□□□□□ -2
SUB1-202ENST00000502453 MPV17P39210 176 aa2.57□□□□□ -2
SUB1-202ENST00000502453 CMTM2Q8TAZ6 248 aa2.57□□□□□ -2
SUB1-202ENST00000502453 CHCHD1Q96BP2 118 aaKnown RBP2.57□□□□□ -2
SUB1-202ENST00000502453 HIGD1BQ9P298 99 aa2.57□□□□□ -2
SUB1-202ENST00000502453 CUL9Q8IWT3 2517 aa2.57□□□□□ -2
SUB1-202ENST00000502453 TRAV14DV4A0A0A6YYC5 116 aa2.56□□□□□ -2
SUB1-202ENST00000502453 IGHV1-3A0A0C4DH29 117 aa2.56□□□□□ -2
SUB1-202ENST00000502453 A0A1B0GW54 56 aa2.56□□□□□ -2
SUB1-202ENST00000502453 NDUFAF8A1L188 74 aa2.56□□□□□ -2
SUB1-202ENST00000502453 E7EQL1 145 aa2.56□□□□□ -2
SUB1-202ENST00000502453 C17orf112F2Z3M2 114 aa2.56□□□□□ -2
SUB1-202ENST00000502453 RPL36AP83881 106 aaKnown RBP2.56□□□□□ -2
SUB1-202ENST00000502453 CLEC2BQ92478 149 aa2.56□□□□□ -2
SUB1-202ENST00000502453 AQP3Q92482 292 aa2.56□□□□□ -2
SUB1-202ENST00000502453 IGKV3D-20A0A0C4DH25 116 aa2.56□□□□□ -2
SUB1-202ENST00000502453 ASAH2BP0C7U1 165 aa2.56□□□□□ -2
SUB1-202ENST00000502453 PEBP1P30086 187 aaKnown RBP2.56□□□□□ -2
SUB1-202ENST00000502453 RPL28P46779 137 aaKnown RBP2.56□□□□□ -2
SUB1-202ENST00000502453 C16orf47Q6ZP98 133 aaPredicted RBP2.56□□□□□ -2
SUB1-202ENST00000502453 HMGN2P46Q86SG4 172 aa2.56□□□□□ -2
SUB1-202ENST00000502453 LINC00474Q9P2X8 69 aa2.56□□□□□ -2
SUB1-202ENST00000502453 ZNF407Q9C0G0 2248 aa2.56□□□□□ -2
SUB1-202ENST00000502453 ARID1BQ8NFD5 2236 aaPredicted RBP2.56□□□□□ -2
SUB1-202ENST00000502453 TRAV17A0A0B4J275 112 aa2.56□□□□□ -2
SUB1-202ENST00000502453 A0A1W2PQD3 144 aa2.56□□□□□ -2
SUB1-202ENST00000502453 C3orf84H3BNL1 204 aa2.56□□□□□ -2
SUB1-202ENST00000502453 TIMM17BO60830 172 aa2.56□□□□□ -2
SUB1-202ENST00000502453 BLCAPP62952 87 aa2.56□□□□□ -2
SUB1-202ENST00000502453 MIR7-3HGQ8N6C7 128 aa2.56□□□□□ -2
SUB1-202ENST00000502453 ZNRD1Q9P1U0 126 aa2.56□□□□□ -2
SUB1-202ENST00000502453 DMXL1Q9Y485 3027 aa2.56□□□□□ -2
SUB1-202ENST00000502453 H7C423 109 aa2.56□□□□□ -2
SUB1-202ENST00000502453 PTHLHP12272 177 aa2.56□□□□□ -2
SUB1-202ENST00000502453 EFNA4P52798 201 aa2.56□□□□□ -2
SUB1-202ENST00000502453 DPTQ07507 201 aa2.56□□□□□ -2
SUB1-202ENST00000502453 NUP214P35658 2090 aaPredicted RBP2.55□□□□□ -2
SUB1-202ENST00000502453 SNRPGP15A8MWD9 76 aa2.55□□□□□ -2
SUB1-202ENST00000502453 GIG44P09565 113 aaPredicted RBP2.55□□□□□ -2
SUB1-202ENST00000502453 CFC1P0CG37 223 aa2.55□□□□□ -2
SUB1-202ENST00000502453 CKS2P33552 79 aa2.55□□□□□ -2
SUB1-202ENST00000502453 FAM229BQ4G0N7 80 aa2.55□□□□□ -2
SUB1-202ENST00000502453 C9orf129Q5T035 196 aaKnown RBP2.55□□□□□ -2
SUB1-202ENST00000502453 LYPD5Q6UWN5 251 aa2.55□□□□□ -2
SUB1-202ENST00000502453 NTM-AS1Q6ZSK4 140 aa2.55□□□□□ -2
SUB1-202ENST00000502453 C1orf147Q96MC9 270 aaPredicted RBP2.55□□□□□ -2
SUB1-202ENST00000502453 PLXNA3P51805 1871 aa2.55□□□□□ -2
SUB1-202ENST00000502453 NYNRINQ9P2P1 1898 aaKnown RBP2.55□□□□□ -2
SUB1-202ENST00000502453 LECT2O14960 151 aa2.55□□□□□ -2
SUB1-202ENST00000502453 OR5AS1Q8N127 324 aa2.55□□□□□ -2
SUB1-202ENST00000502453 LINC00574Q9H8X3 128 aa2.55□□□□□ -2
SUB1-202ENST00000502453 LOC400499M0QZD8 3231 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms