RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 IGLC6P0CF74 106 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 CRIP1P50238 77 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 ZNF415Q09FC8 603 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 PLGLAQ15195 96 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 HRCT1Q6UXD1 115 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 C8orf31Q8N9H6 132 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 C11orf45Q8TAV5 145 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 DEFB104AQ8WTQ1 72 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 FXYD5Q96DB9 178 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 MRPL35Q9NZE8 188 aaKnown RBP4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 MSRB1Q9NZV6 116 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 PRRC2AP48634 2157 aaKnown RBP4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 IGLV3-9A0A075B6K5 115 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 NDUFA3O95167 84 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 ATP6V0E2Q8NHE4 81 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 TMEM158Q8WZ71 300 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 GAFA1Q96PS6 74 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 FOXC2Q99958 501 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 TMEM167BQ9NRX6 74 aa4.48□□□□□ -1.69
SOX2-OT-218ENST00000498731 FAM236AA0A1B0GUQ0 79 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 FAM236BA0A1B0GV22 79 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 RBAKDNA6NC62 111 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 PGPA6NDG6 321 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 C9JAW5 83 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 SNCGO76070 127 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 CD7P09564 240 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 TMEM155Q4W5P6 130 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 PRR26Q8N8Z3 221 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 SRSF12Q8WXF0 261 aaKnown RBP4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 ZNF714Q96N38 554 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 HIGD1AQ9Y241 93 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 IGHV3-21A0A0B4J1V1 117 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 CYSRT1A8MQ03 144 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 SAA2P0DJI9 122 aaPredicted RBP4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 HES1Q14469 280 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 Q96MF0 132 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 IFI27L2Q9H2X8 130 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 KLF12Q9Y4X4 402 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 SOX21Q9Y651 276 aaPredicted RBP4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 TRBV6-6A0A0A6YYG2 114 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 TMEM178BH3BS89 294 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 C8orf88P0DMB2 117 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 ZNF22P17026 224 aaPredicted RBP4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 HERVK_113P63121 156 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 C9orf139Q6ZV77 190 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 EXOC3-AS1Q8N2X6 119 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 KLHL30-AS1Q8NEE0 82 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 NTN5Q8WTR8 489 aaPredicted RBP4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 LINC00477Q96M19 166 aa4.47□□□□□ -1.69
SOX2-OT-218ENST00000498731 SHISA9B4DS77 424 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 NPFFO15130 113 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 HOXA3O43365 443 aaPredicted RBP4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 HBDP02042 147 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 UBE2D3P61077 147 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 UBE2D2P62837 147 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 NSUN5P1Q3KNT7 163 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 DNAJC30Q96LL9 226 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 C15orf65H3BRN8 121 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 IGLV2-11P01706 119 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 PRSS1P07477 247 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 MRPL51Q4U2R6 128 aaKnown RBP4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 TMEM200BQ69YZ2 307 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 PRNTQ86SH4 94 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 C17orf77Q96MU5 243 aa4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 FLNAP21333 2647 aaKnown RBP4.46□□□□□ -1.7
SOX2-OT-218ENST00000498731 MRPS12O15235 138 aaKnown RBP4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 IGKCP01834 107 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 C17orf58Q2M2W7 97 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 Q6ZS46 218 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 MRAPQ8TCY5 172 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 PAXXQ9BUH6 204 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 MRPL20Q9BYC9 149 aaKnown RBP4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 ATRQ13535 2644 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 IGKV1-16P04430 117 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 LEPP41159 167 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 FAM19A1Q7Z5A9 133 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 ZNF575Q86XF7 245 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 NUP37Q8NFH4 326 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 IGHV3OR16-10A0A075B7F0 116 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 H7C2G1 150 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 IL4P05112 153 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 LGALS1P09382 135 aaKnown RBP4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 C10orf55Q5SWW7 151 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 LINC01356Q8N9X3 169 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 TMEM75Q8N9X5 138 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 C8orf49Q96NF6 230 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 DUX3Q96PT4 197 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 TRGV9Q99603 122 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 ZNF492Q9P255 531 aa4.45□□□□□ -1.7
SOX2-OT-218ENST00000498731 ZANQ9Y493 2812 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 PIGBOS1A0A0B4J2F0 54 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 A0A1B0GUT8 65 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 INS-IGF2F8WCM5 200 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 LHBP01229 141 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 SBSPONQ8IVN8 264 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 GATD1Q8NB37 220 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 RPUSD1Q9UJJ7 312 aaKnown RBP4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 TRGV11A0A075B6L2 103 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 MYMXA0A1B0GTQ4 84 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 LOXL3P58215 753 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms