RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TMSB15BA0A087X1C1 80 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 K7EQD1 137 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 ARMS2P0C7Q2 107 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 GYPEP15421 78 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 RPL35P42766 123 aaKnown RBP8.85□□□□□ -0.99
HSPG2-213ENST00000498495 NKX2-5P52952 324 aaPredicted RBP8.85□□□□□ -0.99
HSPG2-213ENST00000498495 BLOC1S1P78537 153 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 MEF2BQ02080 365 aaPredicted RBP8.85□□□□□ -0.99
HSPG2-213ENST00000498495 LINC01559Q495D7 138 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 ZNF506Q5JVG8 444 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 DNLZQ5SXM8 178 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 CFAP126Q5VTH2 177 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 ALKAL2Q6UX46 152 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 NEGR1Q7Z3B1 354 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 MLST8Q9BVC4 326 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 IL36BQ9NZH7 164 aa8.85□□□□□ -0.99
HSPG2-213ENST00000498495 NBDYA0A0U1RRE5 68 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 A8MWV9 139 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 H3BVH4 76 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 PDE6DO43924 150 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 SRIP30626 198 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 SOHLH1Q5JUK2 328 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 LYPD5Q6UWN5 251 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 LINC00336Q6ZUF6 198 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 SYT8Q8NBV8 401 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 C11orf52Q96A22 123 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 UPK3BQ9BT76 320 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 MED9Q9NWA0 146 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 VAX2Q9UIW0 290 aa8.84□□□□□ -0.99
HSPG2-213ENST00000498495 MRPS16Q9Y3D3 137 aaKnown RBP8.84□□□□□ -0.99
HSPG2-213ENST00000498495 IGHV3-73A0A0B4J1V6 119 aa8.83□□□□□ -1
HSPG2-213ENST00000498495 BCL2P10415 239 aa8.83□□□□□ -1
HSPG2-213ENST00000498495 GATA1P15976 413 aaPredicted RBP8.83□□□□□ -1
HSPG2-213ENST00000498495 TAGLN2P37802 199 aaKnown RBP8.83□□□□□ -1
HSPG2-213ENST00000498495 PIK3CD-AS1Q5SR53 167 aa8.83□□□□□ -1
HSPG2-213ENST00000498495 C1orf134Q5TEV5 83 aa8.83□□□□□ -1
HSPG2-213ENST00000498495 DMRTA1Q5VZB9 504 aa8.83□□□□□ -1
HSPG2-213ENST00000498495 PRR27Q6MZM9 219 aa8.83□□□□□ -1
HSPG2-213ENST00000498495 DERL1Q9BUN8 251 aa8.83□□□□□ -1
HSPG2-213ENST00000498495 BOLA1Q9Y3E2 137 aa8.83□□□□□ -1
HSPG2-213ENST00000498495 PHLDA3Q9Y5J5 127 aa8.83□□□□□ -1
HSPG2-213ENST00000498495 TRBV6-4A0A1B0GX49 114 aa8.82□□□□□ -1
HSPG2-213ENST00000498495 ZNF575Q86XF7 245 aa8.82□□□□□ -1
HSPG2-213ENST00000498495 SLC25A29Q8N8R3 303 aa8.82□□□□□ -1
HSPG2-213ENST00000498495 PRADC1Q9BSG0 188 aa8.82□□□□□ -1
HSPG2-213ENST00000498495 DNAH6Q9C0G6 4158 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 LOC100131303A0A0U1RQF7 123 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 RAB19A4D1S5 217 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 PRSS29PA6NIE9 313 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 RTL8CO15255 209 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 MGST1P10620 155 aaKnown RBP8.81□□□□□ -1
HSPG2-213ENST00000498495 GNG4P50150 75 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 RPL19P84098 196 aaKnown RBP8.81□□□□□ -1
HSPG2-213ENST00000498495 RHOHQ15669 191 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 CENPWQ5EE01 88 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 ZFP2Q6ZN57 461 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 SH2D6Q7Z4S9 175 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 DAZAP1Q96EP5 407 aaKnown RBP8.81□□□□□ -1
HSPG2-213ENST00000498495 PARLQ9H300 379 aa8.81□□□□□ -1
HSPG2-213ENST00000498495 M0R381 172 aa8.8□□□□□ -1
HSPG2-213ENST00000498495 SIVA1O15304 175 aa8.8□□□□□ -1
HSPG2-213ENST00000498495 TTC32Q5I0X7 151 aa8.8□□□□□ -1
HSPG2-213ENST00000498495 ZFP82Q8N141 532 aa8.8□□□□□ -1
HSPG2-213ENST00000498495 JPT2Q9H910 190 aa8.8□□□□□ -1
HSPG2-213ENST00000498495 SCRT2Q9NQ03 307 aa8.8□□□□□ -1
HSPG2-213ENST00000498495 RBFOX3A6NFN3 312 aa8.79□□□□□ -1
HSPG2-213ENST00000498495 NXPH4O95158 308 aa8.79□□□□□ -1
HSPG2-213ENST00000498495 IGLV2-8P01709 118 aa8.79□□□□□ -1
HSPG2-213ENST00000498495 CXCL1P09341 107 aa8.79□□□□□ -1
HSPG2-213ENST00000498495 C6orf223Q8N319 242 aa8.79□□□□□ -1
HSPG2-213ENST00000498495 SMIM12Q96EX1 92 aa8.79□□□□□ -1
HSPG2-213ENST00000498495 SAMD10Q9BYL1 202 aa8.79□□□□□ -1
HSPG2-213ENST00000498495 A0A1W2PPQ1 181 aa8.78□□□□□ -1
HSPG2-213ENST00000498495 MED14OSP0DP75 135 aa8.78□□□□□ -1
HSPG2-213ENST00000498495 FAM74A4Q5TZK3 123 aa8.78□□□□□ -1
HSPG2-213ENST00000498495 LYPD6BQ8NI32 183 aa8.78□□□□□ -1
HSPG2-213ENST00000498495 SFRP2Q96HF1 295 aa8.78□□□□□ -1
HSPG2-213ENST00000498495 BIN3Q9NQY0 253 aa8.78□□□□□ -1
HSPG2-213ENST00000498495 RHODO00212 210 aa8.77□□□□□ -1.01
HSPG2-213ENST00000498495 Q6ZSN1 163 aa8.77□□□□□ -1.01
HSPG2-213ENST00000498495 SSBP4Q9BWG4 385 aaPredicted RBP8.77□□□□□ -1.01
HSPG2-213ENST00000498495 DNAH10Q8IVF4 4471 aa8.77□□□□□ -1.01
HSPG2-213ENST00000498495 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1.01
HSPG2-213ENST00000498495 TRAV9-2A0A087WT02 112 aa8.76□□□□□ -1.01
HSPG2-213ENST00000498495 A0A087WWL8 130 aa8.76□□□□□ -1.01
HSPG2-213ENST00000498495 SNAI2O43623 268 aa8.76□□□□□ -1.01
HSPG2-213ENST00000498495 OR5AL1P0C617 328 aa8.76□□□□□ -1.01
HSPG2-213ENST00000498495 RPS20P60866 119 aaKnown RBP8.76□□□□□ -1.01
HSPG2-213ENST00000498495 SSTP61278 116 aa8.76□□□□□ -1.01
HSPG2-213ENST00000498495 SPANXN1Q5VSR9 72 aa8.76□□□□□ -1.01
HSPG2-213ENST00000498495 UFSP1Q6NVU6 142 aa8.76□□□□□ -1.01
HSPG2-213ENST00000498495 OR2D3Q8NGH3 330 aa8.76□□□□□ -1.01
HSPG2-213ENST00000498495 ATP6V0E2Q8NHE4 81 aa8.76□□□□□ -1.01
HSPG2-213ENST00000498495 EIF5A2Q9GZV4 153 aaKnown RBP8.76□□□□□ -1.01
HSPG2-213ENST00000498495 TRBV20OR9-2A0A075B6H5 130 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 XKRY2A2RUG3 117 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 C19orf71A6NCJ1 209 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 GAGE12JA6NER3 117 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 TMEM250H0YL14 139 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 P01737 135 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms